Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0439700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:18575450:18577554:-1 gene:Os03g0439700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1230 family protein. (Os03t0439700-01)
Sequence

ATGCTGCTCCGGCTGAAGGCCGTCGCCGTCCATCCGGCGGCGCTCCTTGGGCGACCGCGC
AGCCATGACGCACCCCAGCTCGTCGGTCGCACGGGCGCGTCGACGACGACGGCGAGGCGG
AGGGCGGCGAGGAGCGCCGTGACGGTGACGATGGCGCTCAAGGAGGAGCCGGAAGGCAGC
CGTAGCGGCTTCGCCGGCGGCGTTCCGAGCTGGGACCCCGGGCTGGAGATCCAAGTCCCT
TTCGAGCAAAGACCGGTGAACGAGTACTCCGCCCTCAAGGATAGCGTACTCTACTCGTGG
GCAGAGCTGAGCCCGGGGTCATTCTTCCTGCGCCTAGGCAGCCTGTGGCTGATCACCTTC
ACGGTGCTCGCCGCGCCCATTGCAGCTGCAAGTTTCAGTCCAGGAAAGGATCCACTCAAA
TTCGTGCTAGCAGCTGGGATTGGAACTCTGCTCCTCGTCTCTTTGGTCGTTCTCCGGATT
TATCTGGGTTGGAGCTACGTTGGTGATAGGCTGTTGTCGGCGGTTGTGCCGTACGAAGAA
ACCGGATGGTACGACGGCCAAATGTGGGTCAAGCCACCAGAGGTATTGGCTCGTGACAGG
CTCTTGGGATCTTACAAGGTAAAGCCGGTGATTAACCTGCTGAAGCAGACGCTGGTGGGC
ACCGGCGCTCTGCTGGTCGGCGCGGTGTCGCTGTTCGCGTTCGCGGCCCCCGTCGAGGAC
TTCCTGCACTCCGTGAACGCACCACCATCCGCTGCCTCCTCCAAGCCCAGTCTCAGAAGG
GAGGAGCTGCTGCGTCTGCCCGTGGAGGTGAGGCAAGACGACGACCTCGCCGCTGCCGCC
GCGGAGGCCGCCGACGGACGGCCGGTCTACTGCAGGGACCGCTACTACCGGGCGCTCGCC
GGCGGGCAGTACTGCAAGTGGGACGACCTGCTCAACTGA

Peptide Sequence

PEP ID

Os03t0439700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:18575450:18577554:-1 gene:Os03g0439700 transcript:Os03t0439700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1230 family protein. (Os03t0439700-01)
Sequence

MLLRLKAVAVHPAALLGRPRSHDAPQLVGRTGASTTTARRRAARSAVTVTMALKEEPEGS
RSGFAGGVPSWDPGLEIQVPFEQRPVNEYSALKDSVLYSWAELSPGSFFLRLGSLWLITF
TVLAAPIAAASFSPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWSYVGDRLLSAVVPYEE
TGWYDGQMWVKPPEVLARDRLLGSYKVKPVINLLKQTLVGTGALLVGAVSLFAFAAPVED
FLHSVNAPPSAASSKPSLRREELLRLPVEVRQDDDLAAAAAEAADGRPVYCRDRYYRALA
GGQYCKWDDLLN

Transcript Sequence

Transcript ID

Os03t0439700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:18575450:18577554:-1 gene:Os03g0439700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1230 family protein. (Os03t0439700-01)
Sequence

ATATACACACCGGGCCACCGGCCGGTAGGGAGTTCTCGCGGTTTTGTCGTTCGATCGATC
GATCGTGTCCATGCTGCTCCGGCTGAAGGCCGTCGCCGTCCATCCGGCGGCGCTCCTTGG
GCGACCGCGCAGCCATGACGCACCCCAGCTCGTCGGTCGCACGGGCGCGTCGACGACGAC
GGCGAGGCGGAGGGCGGCGAGGAGCGCCGTGACGGTGACGATGGCGCTCAAGGAGGAGCC
GGAAGGCAGCCGTAGCGGCTTCGCCGGCGGCGTTCCGAGCTGGGACCCCGGGCTGGAGAT
CCAAGTCCCTTTCGAGCAAAGACCGGTGAACGAGTACTCCGCCCTCAAGGATAGCGTACT
CTACTCGTGGGCAGAGCTGAGCCCGGGGTCATTCTTCCTGCGCCTAGGCAGCCTGTGGCT
GATCACCTTCACGGTGCTCGCCGCGCCCATTGCAGCTGCAAGTTTCAGTCCAGGAAAGGA
TCCACTCAAATTCGTGCTAGCAGCTGGGATTGGAACTCTGCTCCTCGTCTCTTTGGTCGT
TCTCCGGATTTATCTGGGTTGGAGCTACGTTGGTGATAGGCTGTTGTCGGCGGTTGTGCC
GTACGAAGAAACCGGATGGTACGACGGCCAAATGTGGGTCAAGCCACCAGAGGTATTGGC
TCGTGACAGGCTCTTGGGATCTTACAAGGTAAAGCCGGTGATTAACCTGCTGAAGCAGAC
GCTGGTGGGCACCGGCGCTCTGCTGGTCGGCGCGGTGTCGCTGTTCGCGTTCGCGGCCCC
CGTCGAGGACTTCCTGCACTCCGTGAACGCACCACCATCCGCTGCCTCCTCCAAGCCCAG
TCTCAGAAGGGAGGAGCTGCTGCGTCTGCCCGTGGAGGTGAGGCAAGACGACGACCTCGC
CGCTGCCGCCGCGGAGGCCGCCGACGGACGGCCGGTCTACTGCAGGGACCGCTACTACCG
GGCGCTCGCCGGCGGGCAGTACTGCAAGTGGGACGACCTGCTCAACTGACAAAATACTTC
TGTATTACCCAACGGATACGGTGTGCAGTGTGTCCTGAATCCTGATATATGCAGATTGGC
ATGCGAAGCCTCCGCAACTGTGTAATCGGAACGAAATTTTGTGACCATTGGTTGCGTTAA
TGGGACAGATAGATAAATGCTTAATTTATTGGATGCTTGATCGACGCAACATTTGC