Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0430400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:18039103:18041599:1 gene:Os03g0430400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 715 description:Similar to JmjC domain containing protein, expressed. (Os03t0430400-01)
Sequence

GTGGAAATTAACATACACATGTTCTTTATGGGGTATATGAGAGGTAGAAGACATCCGATG
ACCTTTTGGCCTGAGATGCTTAAGCTAAAAGATTGGCCACCATCTAGTATGTTTGACCAG
AGGTTACCTCGCCATGGTGCTGAGTTTATAACTGCATTGCCATTTCCCGAGTATACTGAT
CCACGATATGGCCCGCTAAATCTTGCTGTCAGGCTTCCTGCTGGTGTACTGAAGCCTGAT
CTTGGGCCAAAAACTTATATTGCTTATGGATGTTATGAAGAGTTAGGCAGGGGTGACTCT
GTGACCAAGCTTCATTGCGACATGTCTGATGCGGTAAATATCTTGATGCACACAGCTGAA
GTGTCCTATGACACTGAACAGCTTGACAAGATAGCAAAAATTAAAATGAAAATGAGAGAA
CAAGATCTTCATGAACTGTTTGGGGTTTCAGAATCAGGCGCCAAGGGTAAAGCTGATGAT
GAAGCATCGAAAATCTCATGTAACATGGAAAACAAACACACCTCTAACCAAAGTACTAAG
GGTTTGGACATTAATGCTTTACCACCTGATGATTCTGGAAGTGATATTGGGGATAAACCA
TCATTTTGTCAATCTGAGGTAGAAAGTGAATTAACACAATGTTCAAAACACAATCACGAG
GTTAATAGTTCTGTCAAGATGCATGCTGGAGCTCATTGTACTTCAGACAACCAAGGATAC
ATTGACAGGAGTGGATTCAAACGCAAAGATTCAGACTGTTCAGACCAACAGAAAACTGGT
GGCGCTTTGTGGGATATTTTCCGAAGAGAAGATTCTGAGAAGTTACAAGATTATCTTCGG
AAGCATGCCTCAGAATTTCGGCACATACACTGCAATCCAGTGAAAAATGTTTCTCACCCA
ATTCATGACCAGACTTTCTATTTAACTGTGGAGCATAAGAGAAAGCTCAAGGAAGAACAC
GGTGTTGAACCATGGACATTCGAGCAGAAGCTAGGCGATGCAGTTTTCATTCCTGCTGGA
TGTCCACACCAAGTGAGAAATTTAAAGTCTTGCATCAAGGTTGCTCTAGACTTTGTTTCC
CCTGAAAATGTTGGTGAGTGTGTTAAGCTGACCGGAGAGTTTAGACGTCTTCCATCTGAT
CACAGGGCTAAAGAAGATAAACTAGAGATTAAGAAGATTGCTCTCAATGCTCTTAAAGAA
GTCGTAAATTTCTTAGATCCTTTACCAAAAGGGTCAAAGAACAGGGATGAAGTGGTAGAA
GTGACCAAACCAAAAAGGAAATACGGTAACCGAAGAGGTGACCTGAAGAGTGGGGAAGAC
CAACCCATTGATGAATCCATAGAAGAAAGGAAGCCTAAAAAGCGAGGGAGATCTAAACGG
TGA

Peptide Sequence

PEP ID

Os03t0430400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:18039103:18041599:1 gene:Os03g0430400 transcript:Os03t0430400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 715 description:Similar to JmjC domain containing protein, expressed. (Os03t0430400-01)
Sequence

VEINIHMFFMGYMRGRRHPMTFWPEMLKLKDWPPSSMFDQRLPRHGAEFITALPFPEYTD
PRYGPLNLAVRLPAGVLKPDLGPKTYIAYGCYEELGRGDSVTKLHCDMSDAVNILMHTAE
VSYDTEQLDKIAKIKMKMREQDLHELFGVSESGAKGKADDEASKISCNMENKHTSNQSTK
GLDINALPPDDSGSDIGDKPSFCQSEVESELTQCSKHNHEVNSSVKMHAGAHCTSDNQGY
IDRSGFKRKDSDCSDQQKTGGALWDIFRREDSEKLQDYLRKHASEFRHIHCNPVKNVSHP
IHDQTFYLTVEHKRKLKEEHGVEPWTFEQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVS
PENVGECVKLTGEFRRLPSDHRAKEDKLEIKKIALNALKEVVNFLDPLPKGSKNRDEVVE
VTKPKRKYGNRRGDLKSGEDQPIDESIEERKPKKRGRSKR

Transcript Sequence

Transcript ID

Os03t0430400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:18039103:18041599:1 gene:Os03g0430400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 715 description:Similar to JmjC domain containing protein, expressed. (Os03t0430400-01)
Sequence

AGGTGGAAATTAACATACACATGTTCTTTATGGGGTATATGAGAGGTAGAAGACATCCGA
TGACCTTTTGGCCTGAGATGCTTAAGCTAAAAGATTGGCCACCATCTAGTATGTTTGACC
AGAGGTTACCTCGCCATGGTGCTGAGTTTATAACTGCATTGCCATTTCCCGAGTATACTG
ATCCACGATATGGCCCGCTAAATCTTGCTGTCAGGCTTCCTGCTGGTGTACTGAAGCCTG
ATCTTGGGCCAAAAACTTATATTGCTTATGGATGTTATGAAGAGTTAGGCAGGGGTGACT
CTGTGACCAAGCTTCATTGCGACATGTCTGATGCGGTAAATATCTTGATGCACACAGCTG
AAGTGTCCTATGACACTGAACAGCTTGACAAGATAGCAAAAATTAAAATGAAAATGAGAG
AACAAGATCTTCATGAACTGTTTGGGGTTTCAGAATCAGGCGCCAAGGGTAAAGCTGATG
ATGAAGCATCGAAAATCTCATGTAACATGGAAAACAAACACACCTCTAACCAAAGTACTA
AGGGTTTGGACATTAATGCTTTACCACCTGATGATTCTGGAAGTGATATTGGGGATAAAC
CATCATTTTGTCAATCTGAGGTAGAAAGTGAATTAACACAATGTTCAAAACACAATCACG
AGGTTAATAGTTCTGTCAAGATGCATGCTGGAGCTCATTGTACTTCAGACAACCAAGGAT
ACATTGACAGGAGTGGATTCAAACGCAAAGATTCAGACTGTTCAGACCAACAGAAAACTG
GTGGCGCTTTGTGGGATATTTTCCGAAGAGAAGATTCTGAGAAGTTACAAGATTATCTTC
GGAAGCATGCCTCAGAATTTCGGCACATACACTGCAATCCAGTGAAAAATGTTTCTCACC
CAATTCATGACCAGACTTTCTATTTAACTGTGGAGCATAAGAGAAAGCTCAAGGAAGAAC
ACGGTGTTGAACCATGGACATTCGAGCAGAAGCTAGGCGATGCAGTTTTCATTCCTGCTG
GATGTCCACACCAAGTGAGAAATTTAAAGTCTTGCATCAAGGTTGCTCTAGACTTTGTTT
CCCCTGAAAATGTTGGTGAGTGTGTTAAGCTGACCGGAGAGTTTAGACGTCTTCCATCTG
ATCACAGGGCTAAAGAAGATAAACTAGAGATTAAGAAGATTGCTCTCAATGCTCTTAAAG
AAGTCGTAAATTTCTTAGATCCTTTACCAAAAGGGTCAAAGAACAGGGATGAAGTGGTAG
AAGTGACCAAACCAAAAAGGAAATACGGTAACCGAAGAGGTGACCTGAAGAGTGGGGAAG
ACCAACCCATTGATGAATCCATAGAAGAAAGGAAGCCTAAAAAGCGAGGGAGATCTAAAC
GGTGATCTGAAGATTGAAGATCCTGTCCAACAATGAACCAGTAGATGACTAGATGAGAAG
CCTAAAAAACAATTAATGCTCTTTTGATTATTCAGAGGCCCAAATGATTGGGCTGATATC
GCTCTGGGATAGACTTAAGTTTCGACAGTTCAAGAATCACCTCAGACATCACCATGGTGT
CGATTTTGTTCATATGTGGGGTGATTGCCTTCACTAAAATGATGTGATTGTTTGTTGCTG
ATAGTGGCAATTGACTTGGAATAGCTTTGATG