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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0426800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:17824178:17827704:1 gene:Os03g0426800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MUB1 description:Membrane-anchored ubiquitin-fold protein, HCG-1 domain containing protein. (Os03t0426800-01)
Sequence

ATGTCCGGCGGCGTGCAGGAGCAGTTTGAGATCAAGTTCCGGCTGCCGGACGGCACCGAC
ATCGGGCCCAAGAGGTACCCGGCGGCCTCCACCGTCGCCACGCTCAAGGAATCCATCGTT
GCTCAATGGCCTAAAGATAAGGAAAAGGGCCCAAGGACTGTAAATGACCTCAAGCTTATT
AATGCTGGGAAGATATTGGAGAACAACAAAACCCTTTCAGAATGCAAAAGCCCAATTTGT
GACTTCTCTGGATTGACAACAATGCATGTCGTAGTTCGTGCTCCTACTTCAGACAAACAG
TCCAATAAAATAGTTGCCAAGAAGCCAAAGGATTTCAGGTGTGGTTGTTCCATCATGTGA

Peptide Sequence

PEP ID

Os03t0426800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:17824178:17827704:1 gene:Os03g0426800 transcript:Os03t0426800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MUB1 description:Membrane-anchored ubiquitin-fold protein, HCG-1 domain containing protein. (Os03t0426800-01)
Sequence

MSGGVQEQFEIKFRLPDGTDIGPKRYPAASTVATLKESIVAQWPKDKEKGPRTVNDLKLI
NAGKILENNKTLSECKSPICDFSGLTTMHVVVRAPTSDKQSNKIVAKKPKDFRCGCSIM

Transcript Sequence

Transcript ID

Os03t0426800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:17824178:17827704:1 gene:Os03g0426800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MUB1 description:Membrane-anchored ubiquitin-fold protein, HCG-1 domain containing protein. (Os03t0426800-01)
Sequence

ACCCCCCACACCCCCCTCTCCTCTCCCCACTCCAAATCTCCCTCCTCCTCTTCGTCTTCT
TCCTTCCCCCTTGGGCACTTGGCCTAGCTACTAGTACTACTTCCCCCATGCCCCTCCACT
CCTATGATCCTTCCTCCTCCCCACCCTCCCTGGTTTCTTGATCCATCCTTTCTCATCCAG
ATTTGAGCCCCCGCCTTCTCCGTCCCCCCCGGATTCCTCGCTTTCTGCCCAGAAATTTGC
TGGCGTTGGGGGGGCTCGGAGATGTCCGGCGGCGTGCAGGAGCAGTTTGAGATCAAGTTC
CGGCTGCCGGACGGCACCGACATCGGGCCCAAGAGGTACCCGGCGGCCTCCACCGTCGCC
ACGCTCAAGGAATCCATCGTTGCTCAATGGCCTAAAGATAAGGAAAAGGGCCCAAGGACT
GTAAATGACCTCAAGCTTATTAATGCTGGGAAGATATTGGAGAACAACAAAACCCTTTCA
GAATGCAAAAGCCCAATTTGTGACTTCTCTGGATTGACAACAATGCATGTCGTAGTTCGT
GCTCCTACTTCAGACAAACAGTCCAATAAAATAGTTGCCAAGAAGCCAAAGGATTTCAGG
TGTGGTTGTTCCATCATGTGACAGCTTTGTGAATAGTAGCAGTACAGCGAGGAAGTGTCA
GCTATTGAACTCCTCCCCTTTTTTGGCTCTTGCTAGAGTGTTGTATGATGCCTGAGGCGC
TTTCTCCTTTCATTTTTCTTTCACTGTATTATGGGTGGCTCATTGCCCAAAATCCTGAGT
TGCATCGAGTACATGACTTGAAGTTATTGGTCTAAAATCTAAATTCGTTCCATCTCATCC