Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0425300-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:17757829:17761133:1 gene:Os03g0425300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DGK1 (DIACYLGLYCEROL KINASE1); calcium ion binding / diacylglycerol kinase. (Os03t0425300-01);Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase 1) (DGK 1) (DAG kinase 1). (Os03t0425300-02)
Sequence	AAGCACCGCCTACATTTTCTTTTGAATCCAGTTCAGGTGTTTGAGCTGAGTTCATCACAA GGGCCAGAGATAGGATTATTATTGTTCCGAAAGGTACCACATTTCAGAATCCTTGTATGT GGTGGAGATGGTACTGTTGGTTGGGTTCTTGATGCAATAGATAAACAAAATTATGAATCA CCTCCGCCTGTTGCGATTCTTCCAGCTGGCACTGGGAATGATCTTTCAAGAGTTTTATCT TGGGGAGGTGGTCTAGGTGCTGTTGAGAAGCAAGGAGGCCTCTGCACAGTTCTACATGAC ATAGAGCATGCAGCAGTGACCATCTTAGATAGATGGAAGGTGGCAATTGAAGATAAGCGA GGAAAAAATGTGCTTATGGTGAAGTATATGAACAATTATCTAGGTATCGGTTGTGATGCA AAGGTTGCTCTTGACATTCATAATCTCCGGGAAGAAAATCCTGAAAAGTTCTATAGTCAG TTTTTAAATAAGGTGCTATATGCAAGGGAAGGTGCAAAGAGTATGATCGATAGAACTTTT GTGGACTTACCCTGGCAAGTTAGATTAGAGGTTGATGGAACTGAGATTGAGATTCCAGAG GATTCAGAAGGTGTTCTGGTTGCAAACATTCCGAGCTACATGGGAGGGGTTGATTTGTGG AAAAGCGAGGATGATAACCCTGACAACTTTGACCCACAGTCAATTCATGACAAGATGGTT GAAGTAGTTAGCATCTCCGGAACTTGGCATCTGGGGACACTTCAGGTTGGGCTTTCTCGG GCACGGAGGATTGCTCAAGGACAATCAATCAAAATACAAATTTTCGCTCCATTTCCAGTT CAAGTGGATGGCGAACCATGGACCCAAAACCCCTGCACTCTCAAAATATCCCATCATGGA CAGGCTTTTATGTTGAGGAGAACAATTGAGGAGTCTCTCGGTCATGCTGCTGCAATCGTC ACTGATGTGCTTGAAAATGCTGAATCTAGTCACCTAATCACTGCATCTCAGAAGAGGGCC CTCCTCCAAGAAATGGCTCTGAGGCTTTCATAA

Peptide Sequence

PEP ID	Os03t0425300-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:17757829:17761133:1 gene:Os03g0425300 transcript:Os03t0425300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DGK1 (DIACYLGLYCEROL KINASE1); calcium ion binding / diacylglycerol kinase. (Os03t0425300-01);Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase 1) (DGK 1) (DAG kinase 1). (Os03t0425300-02)
Sequence	KHRLHFLLNPVQVFELSSSQGPEIGLLLFRKVPHFRILVCGGDGTVGWVLDAIDKQNYES PPPVAILPAGTGNDLSRVLSWGGGLGAVEKQGGLCTVLHDIEHAAVTILDRWKVAIEDKR GKNVLMVKYMNNYLGIGCDAKVALDIHNLREENPEKFYSQFLNKVLYAREGAKSMIDRTF VDLPWQVRLEVDGTEIEIPEDSEGVLVANIPSYMGGVDLWKSEDDNPDNFDPQSIHDKMV EVVSISGTWHLGTLQVGLSRARRIAQGQSIKIQIFAPFPVQVDGEPWTQNPCTLKISHHG QAFMLRRTIEESLGHAAAIVTDVLENAESSHLITASQKRALLQEMALRLS

Transcript Sequence

Transcript ID	Os03t0425300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:17757829:17761133:1 gene:Os03g0425300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DGK1 (DIACYLGLYCEROL KINASE1); calcium ion binding / diacylglycerol kinase. (Os03t0425300-01);Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase 1) (DGK 1) (DAG kinase 1). (Os03t0425300-02)
Sequence	AAGCACCGCCTACATTTTCTTTTGAATCCAGTTCAGGTGTTTGAGCTGAGTTCATCACAA GGGCCAGAGATAGGATTATTATTGTTCCGAAAGGTACCACATTTCAGAATCCTTGTATGT GGTGGAGATGGTACTGTTGGTTGGGTTCTTGATGCAATAGATAAACAAAATTATGAATCA CCTCCGCCTGTTGCGATTCTTCCAGCTGGCACTGGGAATGATCTTTCAAGAGTTTTATCT TGGGGAGGTGGTCTAGGTGCTGTTGAGAAGCAAGGAGGCCTCTGCACAGTTCTACATGAC ATAGAGCATGCAGCAGTGACCATCTTAGATAGATGGAAGGTGGCAATTGAAGATAAGCGA GGAAAAAATGTGCTTATGGTGAAGTATATGAACAATTATCTAGGTATCGGTTGTGATGCA AAGGTTGCTCTTGACATTCATAATCTCCGGGAAGAAAATCCTGAAAAGTTCTATAGTCAG TTTTTAAATAAGGTGCTATATGCAAGGGAAGGTGCAAAGAGTATGATCGATAGAACTTTT GTGGACTTACCCTGGCAAGTTAGATTAGAGGTTGATGGAACTGAGATTGAGATTCCAGAG GATTCAGAAGGTGTTCTGGTTGCAAACATTCCGAGCTACATGGGAGGGGTTGATTTGTGG AAAAGCGAGGATGATAACCCTGACAACTTTGACCCACAGTCAATTCATGACAAGATGGTT GAAGTAGTTAGCATCTCCGGAACTTGGCATCTGGGGACACTTCAGGTTGGGCTTTCTCGG GCACGGAGGATTGCTCAAGGACAATCAATCAAAATACAAATTTTCGCTCCATTTCCAGTT CAAGTGGATGGCGAACCATGGACCCAAAACCCCTGCACTCTCAAAATATCCCATCATGGA CAGGCTTTTATGTTGAGGAGAACAATTGAGGAGTCTCTCGGTCATGCTGCTGCAATCGTC ACTGATGTGCTTGAAAATGCTGAATCTAGTCACCTAATCACTGCATCTCAGAAGAGGGCC CTCCTCCAAGAAATGGCTCTGAGGCTTTCATAAACCCACTCTTGAAAACGGTCGCGAAGG TACTCAATCTGCGTTGCAAGTGATCATGCAGTTCGAAGCTGAGTTGTCGATACTTCAACA CCAGTCTAGACAAGAATGTCCTAAAGCAAATTTCAGGCAGGGAGAGGCTCTGCCTGCCTG GTGTCCACGTCTCTCTTCACCAAGTATATATCCACTTGTTTGTGGTGGATGGAACCTAGG AAACATGGGTTCATTGCACACGTTGCACATATTTTTGATTGGAATTTCACTGTATGCACC ACCTCAGGGTAACAGTTGGTAAGCTTTTTTTTTTTGAGCTGAACAGTTGGGAAATGGGTA ATGTTGTGTTGAACTGTTGTTGTGCAAGTTTTCTGTCTACCTTGTTGGTCGGTCTTTCTG TCTGGAAGCTCTCTGTCGAGCGCTCTGGTATCGGGGCATGTTGTATATAAAGTGGCTACT CAGATTGATCTTATTTTCAACCATACCATTTTTTTTTGGTAAAGTTATCAAAAAAGTGCC TACGTTTAGTTTGTTGTCAAACTTTGGT