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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0425200-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:17745404:17748460:-1 gene:Os03g0425200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Inosine/uridine-preferring nucleoside hydrolase domain containing protein. (Os03t0425200-01);Inosine/uridine-preferring nucleoside hydrolase domain containing protein. (Os03t0425200-02)
Sequence

ATGACGACGACGAAGAAGAAGCTCGTCATCGACACCGACCCGGGAATCGATGACGCCATG
GCCATCTTCGTGGCGCTGAGGTCGCCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTC
GGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGG
AGGACTGACATCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTA
CGGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCA
ACTGGGAAGCCCTTAGATCAATCGGCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTAC
CCTGGACAAGTTACTGTGGTTGCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAA
CTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTTGGTGGTGCGTATTCA
GTTAATGGAAATGTCAACCCTGCAGCTGAGGCAAATATATTTGGTGACCCTGATGCAGCT
GATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAA
GTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGA
TACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAA
GGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCACTGATGACT
TACACGGAAGGTGTAGTGAGGGTGCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTC
GACACAACCAAGAAAAGGTATGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAG
GTTGCTGTGACCGTTGATGCTCCTGCCGTTGTGGAGATGATCATGCAGAGGCTTACGACG
GATGATTAG

Peptide Sequence

PEP ID

Os03t0425200-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:17745404:17748460:-1 gene:Os03g0425200 transcript:Os03t0425200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Inosine/uridine-preferring nucleoside hydrolase domain containing protein. (Os03t0425200-01);Inosine/uridine-preferring nucleoside hydrolase domain containing protein. (Os03t0425200-02)
Sequence

MTTTKKKLVIDTDPGIDDAMAIFVALRSPEVELLGLTTIFGNVYTTLATRNALHLLEAVG
RTDIPVAEGSHVTIKKATKLRIASFVHGSDGLGNQNFPPPTGKPLDQSAAAFLVEQANLY
PGQVTVVALGPLTNLALAIELDPSFPKKIGQIVILGGAYSVNGNVNPAAEANIFGDPDAA
DIVFTSGADILAVGINITHQVVLSDADREKLEQSDSKYARYLSKILGLYYDYHKDAYFIK
GVYLHDPATLIAAVDPSLMTYTEGVVRVQTDGITKGLTVFDTTKKRYGEITAWTGKPTVK
VAVTVDAPAVVEMIMQRLTTDD

Transcript Sequence

Transcript ID

Os03t0425200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:17745404:17748460:-1 gene:Os03g0425200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Inosine/uridine-preferring nucleoside hydrolase domain containing protein. (Os03t0425200-01);Inosine/uridine-preferring nucleoside hydrolase domain containing protein. (Os03t0425200-02)
Sequence

ACTCAAACAGCCTTGCCTCCTCCTGTTGAGTTGACCCGATCCCATCCGGTGTTATCCATC
CCTTCCCTGATCCCCCATCCATCGCCGCCGCCGCCGCCGCCGTGGAGACGATGACGACGA
CGAAGAAGAAGCTCGTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCG
TGGCGCTGAGGTCGCCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCT
ACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGACTGACA
TCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTACGGATTGCGA
GCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGC
CCTTAGATCAATCGGCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAG
TTACTGTGGTTGCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTT
CTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTTGGTGGTGCGTATTCAGTTAATGGAA
ATGTCAACCCTGCAGCTGAGGCAAATATATTTGGTGACCCTGATGCAGCTGATATAGTTT
TCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTT
CTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCA
AGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATC
TTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGGAAG
GTGTAGTGAGGGTGCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACAACCA
AGAAAAGGTATGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAGGTTGCTGTGA
CCGTTGATGCTCCTGCCGTTGTGGAGATGATCATGCAGAGGCTTACGACGGATGATTAGC
AGCAGCAGCAGCAGCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGT
TGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATT
TGCTTTACATGATTCGTCGTCGAGGTTGATCAACATCACACAGAACTAGCTAGAAACAGC
CTGATGCACTGATTCAGAGGTTGACAATCCATTTCAATTTTATGGCCAGAATTCATACTA
C