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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0424800-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:17727085:17728835:1 gene:Os03g0424800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPS19A description:Similar to 40S ribosomal protein S19-3. (Os03t0424800-00)
Sequence

ATGGCGGATTCGACGGCGAGGACGGTGAAGGACGTGAACCCTCATGAGTTCGTCAAGGCC
TACTCCGCCCACCTCAAGCGCTCCGGCAAGATGGAGCTCCCTGAGTGGGTTGACATCGTG
AAGACTGCGAGGTTCAAGGAGCTCCCTCCTTATGATCCGGACTGGTACTACACGAGGGCT
GCCTCGATTGCAAGGAAGATCTACCTGAGGCAGGGTATTGGTGTAGGTGGCTTCCAGAAG
ATCTATGGTGGCCGCCAGAGGAACGGCTCACGCCCCCCGCACTTCTGCAAGAGCAGCGGC
GCTATCTCACGCAACATCCTTCAGCAGCTGCAGAAGATGGGCATCATTGATGTCGACCCG
AAGGGTGGAAGACTCATCACCTCCCAGGGAAGGCGTGATCTGGACCAAGTGGCCGGAAGA
GTTGATGTTACCATCGCCTGA

Peptide Sequence

PEP ID

Os03t0424800-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:17727085:17728835:1 gene:Os03g0424800 transcript:Os03t0424800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPS19A description:Similar to 40S ribosomal protein S19-3. (Os03t0424800-00)
Sequence

MADSTARTVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRA
ASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDP
KGGRLITSQGRRDLDQVAGRVDVTIA

Transcript Sequence

Transcript ID

Os03t0424800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:17727085:17728835:1 gene:Os03g0424800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPS19A description:Similar to 40S ribosomal protein S19-3. (Os03t0424800-00)
Sequence

CGGCGGCGGCGGGATGGCGGATTCGACGGCGAGGACGGTGAAGGACGTGAACCCTCATGA
GTTCGTCAAGGCCTACTCCGCCCACCTCAAGCGCTCCGGCAAGATGGAGCTCCCTGAGTG
GGTTGACATCGTGAAGACTGCGAGGTTCAAGGAGCTCCCTCCTTATGATCCGGACTGGTA
CTACACGAGGGCTGCCTCGATTGCAAGGAAGATCTACCTGAGGCAGGGTATTGGTGTAGG
TGGCTTCCAGAAGATCTATGGTGGCCGCCAGAGGAACGGCTCACGCCCCCCGCACTTCTG
CAAGAGCAGCGGCGCTATCTCACGCAACATCCTTCAGCAGCTGCAGAAGATGGGCATCAT
TGATGTCGACCCGAAGGGTGGAAGACTCATCACCTCCCAGGGAAGGCGTGATCTGGACCA
AGTGGCCGGAAGAGTTGATGTTACCATCGCCTGAACAGATCCATTGATCCTCAACCCTTA
ATGCCTGTCATGTTTGGTGGTTGAGTTGGCTACAGTTTGTTTGCAGTTTTGAATTAGAAC
ATGCCCTATCTTTGTTGGCTCAGAGAATTGGAAGTTGGATGCATCTAGTTATGATATTGC
AGTATGTGTTTTTTGTCTTTTGCTGAATGAACTCCTAATGCACTGTCACTAGTTCCGGAC
AAAAGAAAATTAAATTATGCCAATGGAATGTCTCTGCTGATGCCAGTTTTATTC