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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0421800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:17569815:17572007:-1 gene:Os03g0421800 gene_biotype:protein_coding transcript_biotype:protein_coding description:X8 domain containing protein. (Os03t0421800-01)
Sequence

ATGGAGTCAGCGGCGGCGTTGGCGTTGGTTCTTGCGGTGCTCCTCCTCTCCTCCACCCTC
GCGGCTTCAGATTTCTGCGTGTGCCGGTCGGAGCAGCCGACGGCGCTGCTGCAGAAGGCG
ATCGACTACTCGTGCGGGCAGGGGGCGGACTGCACGTCCATCCTCTCCAGCGGCGGCTGC
TACAACCCAAACACCGTCGCCGCCCACTGCTCCTGGGCCGCCAACAGCTACTTCCAGAAG
TTCAGGGCCTCCGGCGCCACCTGCGACTTCGGCGGCGCCGCCACCCTCTCCTCCTCCGAC
CCCAGTTTCTCTGGATGCACTTTCCCTTCCAGTGCCAGTGCTGCTGGGACAACTGGCTTG
AGCCCTGGAGTCGGCACCGGCACCGGCACCTTGAGCCCCGGAGGCGGCATCGGAACCGGC
ACCAATGGCACCGGGATGGGGAGCGCCCTGAGCCCGCCGGGCACGAGCAACTTCGACGGC
GCGGCCGCGGAGGCCGGCTTGCTCCCGAGGGCTGAGCCGGCCATCTTCTTCACCGTCCTC
CTCCTCTCGTTCTTGGCATTGCCATGA

Peptide Sequence

PEP ID

Os03t0421800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:17569815:17572007:-1 gene:Os03g0421800 transcript:Os03t0421800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:X8 domain containing protein. (Os03t0421800-01)
Sequence

MESAAALALVLAVLLLSSTLAASDFCVCRSEQPTALLQKAIDYSCGQGADCTSILSSGGC
YNPNTVAAHCSWAANSYFQKFRASGATCDFGGAATLSSSDPSFSGCTFPSSASAAGTTGL
SPGVGTGTGTLSPGGGIGTGTNGTGMGSALSPPGTSNFDGAAAEAGLLPRAEPAIFFTVL
LLSFLALP

Transcript Sequence

Transcript ID

Os03t0421800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:17569815:17572007:-1 gene:Os03g0421800 gene_biotype:protein_coding transcript_biotype:protein_coding description:X8 domain containing protein. (Os03t0421800-01)
Sequence

CTCCCGCGCATTACAACAGCTACGCTACGGCCCCACCCAACTGCTCTTCCTACGCGCGGT
CATCGTCTGCTTCTTGTTAATTCGACCGGCGGTGATGGAGTCAGCGGCGGCGTTGGCGTT
GGTTCTTGCGGTGCTCCTCCTCTCCTCCACCCTCGCGGCTTCAGATTTCTGCGTGTGCCG
GTCGGAGCAGCCGACGGCGCTGCTGCAGAAGGCGATCGACTACTCGTGCGGGCAGGGGGC
GGACTGCACGTCCATCCTCTCCAGCGGCGGCTGCTACAACCCAAACACCGTCGCCGCCCA
CTGCTCCTGGGCCGCCAACAGCTACTTCCAGAAGTTCAGGGCCTCCGGCGCCACCTGCGA
CTTCGGCGGCGCCGCCACCCTCTCCTCCTCCGACCCCAGTTTCTCTGGATGCACTTTCCC
TTCCAGTGCCAGTGCTGCTGGGACAACTGGCTTGAGCCCTGGAGTCGGCACCGGCACCGG
CACCTTGAGCCCCGGAGGCGGCATCGGAACCGGCACCAATGGCACCGGGATGGGGAGCGC
CCTGAGCCCGCCGGGCACGAGCAACTTCGACGGCGCGGCCGCGGAGGCCGGCTTGCTCCC
GAGGGCTGAGCCGGCCATCTTCTTCACCGTCCTCCTCCTCTCGTTCTTGGCATTGCCATG
AAGTGATCTCTCTCTCACTCTCCCTGTGATGGTAGAAGAAAGCAGCAGTAGATCAAACTC
CTCTTTGTATTTTACTATTTTTCAGTATAGTTGATGTCTGATCTACCAAAAGGGAAAAAA
ATATATGAAAAGTTTGATTGGTTGGAGAGAAGAGAATCCAAATTGATCCATCTGCCCACT
AGCACTAGGGATTGCTGCTAGCTGCTGTTCTTGTTGCTTAGTGTTGTGATGGTGTGAGAG
TATAACTTTTTGGTTGAAGTATACT