Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0418700-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:17422176:17426743:1 gene:Os03g0418700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0418700-01);Hypothetical conserved gene. (Os03t0418700-02)
Sequence	ATGCCGTCCCGGATGATGCAGGCGTTCGCGCAGGAGGCTTCCGACTTCGACCGGCAGATG GGCTGCATGGCCGGCATGTTCCAGATCTTCGACCGCCGCCGCCTCCTCACCGCGCGTCAA CGCGGCGGAGCCCGAGGCACGGCGCCACCAGGTAGCCATGTTTTGCCAAACAGCAACAGC AATGTCTCGATTCAAAACCCAGTTGCTTCAAACAACACTCTGGACAAAACCTTCAGCAAA AGTATGACCGAGAACAGTAGCCTCTCCATGGAATCATCGCGGGCATCTTCTTCTTCCTCA TCGTGCTCTTCGTTCTCGTCCACAGACATCAACAGACCAATACAACAAGAGCTCTCCTAC ATCAACAAAGAGCGTTTTGCTGGGAAGCCACCAAGAAGCTCACAGACAAAGAGTGTGAAA TGTTCCAAGACAGAGGCCAAAACCAAAGACCCACACACTGGCTTTAGAGACATTGTCAAG GAGTCCATCAACCGGGAAACCCATGGTATGACCATCAAGACGTCGACAAAGGAGTCCAGA AAAGGATTGCACAAAGACTCACCAAGGCCGTTGCTGATCTCCAAATCAACCGATGGAACT TACGTGATTGGGATCGACAGGAGCACCGGCGTTCCTGGATATGTTCATGAATCCAGCAGG CCACCACGCTTCTCATGCGACGATCGGCAACTCCTGAGGTCGGTCGAAGCGCAAGACAGC AAGAAGCCTTCAGCAAAGCTCAAGGAGCTTCCCAGGCTGTCCTTGGACAGCAGAAAAGAA TCCATGAATCCATGTTCACGTCTGAAGAACTCTGGCTACATAAGAACTGATGACAACCTC CTGGATGTTCTGAAGCACCAAGAATCGCCGAGCCATCAGCGGGCCAGCAGCGTCGTTGCC AAGCTCATGGGGTTGGAAGGAACTACTCCTGACATCCATGAGACGGCAAGGTCACCTACA CCTGTCCATGGCACGCAAATTGATCAGCCGTCACACTGTCAAAGGATCAAGAACCAAGAT CATAGTGTCCCGGTGCAGAAGAATCACTCTCCAGTACTGAAAACCAATCCTTCTCCAAGA ATTATCCCTGAAGCAGCCCCATGGAGACAGAATGAGAGAGCTGTAACAGGACGTGCAGCT GAAGTGAAGCCAAGAACTGCATCCATCTATGCTGACATACAGAGAAGACTCAGGGGTCTA GAGTTGTCGGAATGCAACAAGGAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAA AAGGATGGCCCAAGCCAGAGCGACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCC TCTGAACAAATAGTTGATTCTGAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCA AGATGCATCACAAAACCTGATGCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAA GGCATAAGAAGACTACGGCATGAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGAT AGCAAGAGAAATCATTCTCCGAATGAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAAT TCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCG GACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAA GAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCT GACAACGATAATGTGTTACACATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGAT GTGGGTGTCGTTGATCATCCGAATCCTCTGAATGCCAACTCACCATATATCCATCAAAGC AAAATAGCTTCAACACCCAATCGTGAGGAAATGCCTACAATTCTACCTGCAGACAAGAAG AAGATCCATCCACAGGAGAACATCCCAAGTCCTGTGTCAGTTCTTGATGCAACATTTTAT CATGAGGGGTCATCGCCTTCTCTGAAGAGAATCTCAGATTCCTTCAAAGACGGCGAGACG CATACTTCAGATGAGAGTTGGAACCCAACAAGCCTCCCTGATACACCACCTTCAAAGGCA AGCAACGATGGCAACCAGATAAAGGCAGAAAACATGAAAGCCCTCATCCAAAAGCTTGAG CTCTTGCAAATGTTGAGTGAGGAAGCTCTGAAAACCGATGACACTTTTTCATCAGTTGCT GCCAATAAAGATCACCAGTACCTCTACGAGATACTTTCAGCATCAGGGATCCTACACAAC AAACTAAATTTTCAAATGATGCCTCATCAGCTGCGACCATCAAGCTACCCGATTAATCCA GAGCTTTTCCTCATCCTTGAACAAGCAAAACCAGACGAAGAAAAGCTGCACCGTAGGCTC ATATTTGATCTTGCAAATGAACTCCTCGCCCAGCAAATGGATGCCAACCACACTGTGAAT TCATCAGTGCAGTTCTTTCAGTCAAAGAAGTTAAGTGGGTGGCAACTTTTCAAGGACTTA TGTGCAGAGATTGACATGATCCAGTCTCGGTCCTCAATGATAAGGTGCTCTGAAGAGGAA GATAGCAGGCTAGCAGAGGATGCAATGCAAGGCATGAAAGAGTGGAAGAGCTCCGACAGT GAACGGCAAGGAATTGTTTTGGCCATTGAAAAATCCATCTTTAAGGATCTTATTGATGAG ATAATTAGTGGAGTAGACAAAGGGAAGGTGCACCTGACGCAATGGAAGCTAAGGAGGCAG CTGTCTTTCATCAGCATATAG

Peptide Sequence

PEP ID	Os03t0418700-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:17422176:17426743:1 gene:Os03g0418700 transcript:Os03t0418700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0418700-01);Hypothetical conserved gene. (Os03t0418700-02)
Sequence	MPSRMMQAFAQEASDFDRQMGCMAGMFQIFDRRRLLTARQRGGARGTAPPGSHVLPNSNS NVSIQNPVASNNTLDKTFSKSMTENSSLSMESSRASSSSSSCSSFSSTDINRPIQQELSY INKERFAGKPPRSSQTKSVKCSKTEAKTKDPHTGFRDIVKESINRETHGMTIKTSTKESR KGLHKDSPRPLLISKSTDGTYVIGIDRSTGVPGYVHESSRPPRFSCDDRQLLRSVEAQDS KKPSAKLKELPRLSLDSRKESMNPCSRLKNSGYIRTDDNLLDVLKHQESPSHQRASSVVA KLMGLEGTTPDIHETARSPTPVHGTQIDQPSHCQRIKNQDHSVPVQKNHSPVLKTNPSPR IIPEAAPWRQNERAVTGRAAEVKPRTASIYADIQRRLRGLELSECNKELRALRILSTLHK KDGPSQSDNNPELTAIQKKASEQIVDSENFQSPIVIMKPARCITKPDASDTLVAPLSRPK GIRRLRHEETSFTRKNENSDSKRNHSPNESAHSSGEEPVNSARSPRLSSSLSPRLAQKKA DSERRSRPPVLPTSPGKKSKETVSPRGRLRSRHSQTKSNSDNDNVLHIPETKINLAKQID VGVVDHPNPLNANSPYIHQSKIASTPNREEMPTILPADKKKIHPQENIPSPVSVLDATFY HEGSSPSLKRISDSFKDGETHTSDESWNPTSLPDTPPSKASNDGNQIKAENMKALIQKLE LLQMLSEEALKTDDTFSSVAANKDHQYLYEILSASGILHNKLNFQMMPHQLRPSSYPINP ELFLILEQAKPDEEKLHRRLIFDLANELLAQQMDANHTVNSSVQFFQSKKLSGWQLFKDL CAEIDMIQSRSSMIRCSEEEDSRLAEDAMQGMKEWKSSDSERQGIVLAIEKSIFKDLIDE IISGVDKGKVHLTQWKLRRQLSFISI

Transcript Sequence

Transcript ID	Os03t0418700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:17422176:17426743:1 gene:Os03g0418700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0418700-01);Hypothetical conserved gene. (Os03t0418700-02)
Sequence	GACAAGCACCATTCCTCTCAACTGAACCTGTCAAACAGAGAGAGAAGTAGATGATAGCGT GAGAGAATAGAACAGAAGAAAGAAGATAAAAAAAAAGAAAAGGAAAGGAAAGCTCTGTGT AAAGCCTGCATCTACGTGCTCTCTTTGGTTGGGGTGTTCTTGCTGCTAGAACTAGCTTAG CCTGGTTCTGCCATGGAGTGAAGAGGCCTCTCGTTCATCTCCGATTCTTGGGGGTTGTCT TCAGCTGTTCAGCAAGAGCCGAGAGCTTAGCTTGGGGCAAAGGAAATGCCGTCCCGGATG ATGCAGGCGTTCGCGCAGGAGGCTTCCGACTTCGACCGGCAGATGGGCTGCATGGCCGGC ATGTTCCAGATCTTCGACCGCCGCCGCCTCCTCACCGCGCGTCAACGCGGCGGAGCCCGA GGCACGGCGCCACCAGGTAGCCATGTTTTGCCAAACAGCAACAGCAATGTCTCGATTCAA AACCCAGTTGCTTCAAACAACACTCTGGACAAAACCTTCAGCAAAAGTATGACCGAGAAC AGTAGCCTCTCCATGGAATCATCGCGGGCATCTTCTTCTTCCTCATCGTGCTCTTCGTTC TCGTCCACAGACATCAACAGACCAATACAACAAGAGCTCTCCTACATCAACAAAGAGCGT TTTGCTGGGAAGCCACCAAGAAGCTCACAGACAAAGAGTGTGAAATGTTCCAAGACAGAG GCCAAAACCAAAGACCCACACACTGGCTTTAGAGACATTGTCAAGGAGTCCATCAACCGG GAAACCCATGGTATGACCATCAAGACGTCGACAAAGGAGTCCAGAAAAGGATTGCACAAA GACTCACCAAGGCCGTTGCTGATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATC GACAGGAGCACCGGCGTTCCTGGATATGTTCATGAATCCAGCAGGCCACCACGCTTCTCA TGCGACGATCGGCAACTCCTGAGGTCGGTCGAAGCGCAAGACAGCAAGAAGCCTTCAGCA AAGCTCAAGGAGCTTCCCAGGCTGTCCTTGGACAGCAGAAAAGAATCCATGAATCCATGT TCACGTCTGAAGAACTCTGGCTACATAAGAACTGATGACAACCTCCTGGATGTTCTGAAG CACCAAGAATCGCCGAGCCATCAGCGGGCCAGCAGCGTCGTTGCCAAGCTCATGGGGTTG GAAGGAACTACTCCTGACATCCATGAGACGGCAAGGTCACCTACACCTGTCCATGGCACG CAAATTGATCAGCCGTCACACTGTCAAAGGATCAAGAACCAAGATCATAGTGTCCCGGTG CAGAAGAATCACTCTCCAGTACTGAAAACCAATCCTTCTCCAAGAATTATCCCTGAAGCA GCCCCATGGAGACAGAATGAGAGAGCTGTAACAGGACGTGCAGCTGAAGTGAAGCCAAGA ACTGCATCCATCTATGCTGACATACAGAGAAGACTCAGGGGTCTAGAGTTGTCGGAATGC AACAAGGAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGC CAGAGCGACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATAGTT GATTCTGAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAA CCTGATGCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTA CGGCATGAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCAT TCTCCGAATGAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCA AGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGG TCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCA AGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTG TTACACATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGAT CATCCGAATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACA CCCAATCGTGAGGAAATGCCTACAATTCTACCTGCAGACAAGAAGAAGATCCATCCACAG GAGAACATCCCAAGTCCTGTGTCAGTTCTTGATGCAACATTTTATCATGAGGGGTCATCG CCTTCTCTGAAGAGAATCTCAGATTCCTTCAAAGACGGCGAGACGCATACTTCAGATGAG AGTTGGAACCCAACAAGCCTCCCTGATACACCACCTTCAAAGGCAAGCAACGATGGCAAC CAGATAAAGGCAGAAAACATGAAAGCCCTCATCCAAAAGCTTGAGCTCTTGCAAATGTTG AGTGAGGAAGCTCTGAAAACCGATGACACTTTTTCATCAGTTGCTGCCAATAAAGATCAC CAGTACCTCTACGAGATACTTTCAGCATCAGGGATCCTACACAACAAACTAAATTTTCAA ATGATGCCTCATCAGCTGCGACCATCAAGCTACCCGATTAATCCAGAGCTTTTCCTCATC CTTGAACAAGCAAAACCAGACGAAGAAAAGCTGCACCGTAGGCTCATATTTGATCTTGCA AATGAACTCCTCGCCCAGCAAATGGATGCCAACCACACTGTGAATTCATCAGTGCAGTTC TTTCAGTCAAAGAAGTTAAGTGGGTGGCAACTTTTCAAGGACTTATGTGCAGAGATTGAC ATGATCCAGTCTCGGTCCTCAATGATAAGGTGCTCTGAAGAGGAAGATAGCAGGCTAGCA GAGGATGCAATGCAAGGCATGAAAGAGTGGAAGAGCTCCGACAGTGAACGGCAAGGAATT GTTTTGGCCATTGAAAAATCCATCTTTAAGGATCTTATTGATGAGATAATTAGTGGAGTA GACAAAGGGAAGGTGCACCTGACGCAATGGAAGCTAAGGAGGCAGCTGTCTTTCATCAGC ATATAGGCCAAATTTCTGCTTCTTAGGAAGCTTAGCTAATGGTATATGTAACCGTTTTAA ACTGGCTATACAATCCATGAGTTAACTGACATATATATATCTACATGAGCAAGCAAACAG TAACACTGAGATCTTGCCAACC