Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0416500-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:17288187:17292356:-1 gene:Os03g0416500 gene_biotype:protein_coding transcript_biotype:protein_coding description:6-phosphogluconolactonase domain containing protein. (Os03t0416500-01);6-phosphogluconolactonase domain containing protein. (Os03t0416500-02)
Sequence

ATGCTCAGTTGGAATAATAGCTGGCATTCAAGTTCAACAGAAAATAGAACAATGGAGAGG
GAAATTGTGGCCTCATATGAACCCAAGAAGAATAACGAAATCAGGATGTTTGAGAGTTCA
GACGAGATGGCAACAGATCTGGCTGAGTATATTTCACAAGTTTCAGAAATTTCTATTAAG
GAAAGAGGTTACTTTGCTATTGCCCTGTCTGGAGGGCCTCTTATCAGTTTTATGCGGAAA
CTTTGTGAAGCACCATACAACAAAACCCTGGATTGGTCTAAATGGTACATCTTCTGGGCT
GATGAACGTGCGGTGGCTAAGAACCATGTGGATAGCTACTATAAATCAACAAAAGAAGAT
TTTCTCTCCAAGGTGCCTATTCTTAATGGTCACGTCTACTCCATCAATGACAATGTGACG
GTGGAGGATGCAGCGACGGACTACGAATTCGTCATCCGTCAGCTGGTCAAGATTCGCACA
GTCGGAGTTTCAGAGAGCAACGACTGCCCCAAGTTTGATCTGATCCTCCTTAGCATCGGC
TCTGATGGTCATGTAGCCTCATTGTTCCCCAACCATCCTGCACTTGAGCTCAAGGACGAC
TGGGTCACCTACATCACCGACTCTCCGGTGCCGCCACCGGAGAGGATCACCTTCACCCTT
CCCGTGATAAACTCGGCATCGAACATCGCCGTAGTGGCCACCGGAGAAGACAAGGCAAAG
GCTGTGTATTTTGCCATCTCTGACGGTACAGAGGGTCCTGATGCTCCATCAATTCCTGCA
AGAATGGTTCAGCCAACGGACGGTAAGTTGGTTTGGTTTTTGGACAAGGCGAGTGCCTCG
TTTCTTGAGGCCAAGACCAAGAACGATGGGTATGAGCATCCAAAGTATTAG

Peptide Sequence

PEP ID

Os03t0416500-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:17288187:17292356:-1 gene:Os03g0416500 transcript:Os03t0416500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:6-phosphogluconolactonase domain containing protein. (Os03t0416500-01);6-phosphogluconolactonase domain containing protein. (Os03t0416500-02)
Sequence

MLSWNNSWHSSSTENRTMEREIVASYEPKKNNEIRMFESSDEMATDLAEYISQVSEISIK
ERGYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKED
FLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIG
SDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAK
AVYFAISDGTEGPDAPSIPARMVQPTDGKLVWFLDKASASFLEAKTKNDGYEHPKY

Transcript Sequence

Transcript ID

Os03t0416500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:17288187:17292356:-1 gene:Os03g0416500 gene_biotype:protein_coding transcript_biotype:protein_coding description:6-phosphogluconolactonase domain containing protein. (Os03t0416500-01);6-phosphogluconolactonase domain containing protein. (Os03t0416500-02)
Sequence

GTTGGTCACTCGGTCAGTCCGGTGCTGCTGCTGCAAGAGCCAAGAACCAGGGCGTACTTG
TGTTCTTCACCTTTTACTTTTTCTGACGGATCGTTACCGTCTTCTTCTGCTGTTACGGCA
TTGCTGATTAGATTGTGGGGCTGTTCTGTCTCAACTCTCAAGATTGGTGGTCGAATGAGT
GTCTCTTTACTTGATTAGATGCTGATTTGCCCAACAAGTTTGGATTTTTTTTTTTCTTTT
CTCACTGTTTTGTCAGCTCGATTCGTGCAGGTAGCTAAGCTTTTCTCGTTTCTTGAGCAA
TGGCTGTTGGAAGCAGTTCAGTACTAGTTTCCTATGGTTGATTTGTACTGTTATTTTCCC
CCCTTCTGAATTTGATCTGGGTAAAGTAGTAGTAAAGTGAGTAGAATAGTTCCTTTCTCT
CTCTCTCTCTAGTTACCAGTTGCTTCCCTTTTGGATGCTTTTTTATGTGATTCTGAAAAC
AAAAAAGCTTGGAATCTTTGATGTGCTCTCAAGCTCTTTGCCCAAATGATGGCTGCTAGA
GCTTGCAGTGGCAACATAGCTTTTGCTTTGTTTGCTTCCCCTCACTTCCCGTTACAGTTC
TTGTCAGCTTTTTCCCCTTCCTTGAGAGTTGAACATTTAAGCAAATTATTCTTCCTTTCT
CATGCTAGTATAATTTGCTGGTCAAAACATTGTTGGTTCTTTGATAATGTTTTTCAGATG
AACACCTCTTAATGGTTTTTAAAAAATATTTCTTATTTACACCTTTTTTTCTTGGGGTTT
TTTTAAATGTTCATGTCTAACCATTAAGCAGCACAATATTTGAGTTACGCAGTGGCTTCG
TCTTAACCTGCTATACTTCTTGATTATCATTTCTGCCGGGCTGTAATGGAATAGATGCTT
GTTCTGTTGACAGTGTATTGGGACTTCAGATTTTGAGTGACATGAGTGTATTTACGGTTT
TCTATCTGGCTATAGTTTGCTAAATTATTTTCACAAAACAAAAAAGAGGTGTGTTCGCAA
GGTTAGCATACTATACTATATCTCTGTCACATCATAATCTTGAATAAATCCAATTGTCTT
CTAGTGGCATGTTCCAATCGTCATAGTTATTTAGCGATCTTATGCTGCTCAATTTCTTCT
ATTAAAATTTCTAGTCTTTTGTTTGTGAATGCATATATAGTCGATTAGAGACAACACTTT
TTTCCATTTAGCAAGCTTATTATCTTTATAAAAAAAAACCATGCATATTGAAGCACCTCT
CTGTTGCTGGACAAATGTTTTAAGCTCTTTTACTACAACTAGTGCAGATATCTTTTATTA
AAAAAAAATGCCAACAAGATATTGAACATTGTGTTTCCAGACTCAAGAGGTACACTGTTT
TTCTAAGCAGAGAGAAGCACCTTGCTGTGTAGCGTTTTACTTATTTAGTCTATGTTTCAT
CTTGTTGAAAATTTTCAGGTTTAACATTTTGTTAGATAGCAATAAGCTGTTGTCTTTATC
AACATATAGCGGTGTACACAAGTTATTACATGTTAGGGCTAATATAGATCAGTTGAGATT
GACCGTATACATCATGCTTAGGTTTCAAATATCTGTTCTGATGAAGAAAACTCTGACAAA
TGATTCTGAAGGATAAATGATGGAGGATATTTGGTAGTCAAAGTATTCAATGCAGATGTT
TTTTTTTCTTTGCCATAAGCCCATAACAAGAAAATACACTAAATATATGACCTTCCTTCT
TACTTGTAAAGAATTAGAAGCTGAATCATGTTTGTTTATTGATGTTTCCGAATCAATTGG
ACATTGCCTTCTGGGGTGCCAAGTTGAAAGTTCATCTCTTCACGTACTTCTTACATAGGG
ATGCTCAGTTGGAATAATAGCTGGCATTCAAGTTCAACAGAAAATAGAACAATGGAGAGG
GAAATTGTGGCCTCATATGAACCCAAGAAGAATAACGAAATCAGGATGTTTGAGAGTTCA
GACGAGATGGCAACAGATCTGGCTGAGTATATTTCACAAGTTTCAGAAATTTCTATTAAG
GAAAGAGGTTACTTTGCTATTGCCCTGTCTGGAGGGCCTCTTATCAGTTTTATGCGGAAA
CTTTGTGAAGCACCATACAACAAAACCCTGGATTGGTCTAAATGGTACATCTTCTGGGCT
GATGAACGTGCGGTGGCTAAGAACCATGTGGATAGCTACTATAAATCAACAAAAGAAGAT
TTTCTCTCCAAGGTGCCTATTCTTAATGGTCACGTCTACTCCATCAATGACAATGTGACG
GTGGAGGATGCAGCGACGGACTACGAATTCGTCATCCGTCAGCTGGTCAAGATTCGCACA
GTCGGAGTTTCAGAGAGCAACGACTGCCCCAAGTTTGATCTGATCCTCCTTAGCATCGGC
TCTGATGGTCATGTAGCCTCATTGTTCCCCAACCATCCTGCACTTGAGCTCAAGGACGAC
TGGGTCACCTACATCACCGACTCTCCGGTGCCGCCACCGGAGAGGATCACCTTCACCCTT
CCCGTGATAAACTCGGCATCGAACATCGCCGTAGTGGCCACCGGAGAAGACAAGGCAAAG
GCTGTGTATTTTGCCATCTCTGACGGTACAGAGGGTCCTGATGCTCCATCAATTCCTGCA
AGAATGGTTCAGCCAACGGACGGTAAGTTGGTTTGGTTTTTGGACAAGGCGAGTGCCTCG
TTTCTTGAGGCCAAGACCAAGAACGATGGGTATGAGCATCCAAAGTATTAGCGACTTGGC
ATTCCCTTTTTGCTGCCTATGAAGAGTTGAGTTGATCATGTAGTAGTTGATGGTTTTTGA
TGGAAGATGCTTTCCTCCATTACCTTGGTAGTAAGCAGTTCAGGTGCTCGTTTTGAAGGT
ACTTGGATCTGAGAATATGAAAATATCCGTGTCTTTTTGGAGTTG