Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0416300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:17262473:17266217:-1 gene:Os03g0416300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BC1L2 description:Similar to Phytochelatin synthetase (Fragment). (Os03t0416300-01);Similar to COBRA-like protein 2. (Os03t0416300-02)
Sequence	ATGGCGAGGTTTCTCCTGGGTGCGGCCGCCATTGCGCTGCTCGCCGGCGTGTCGTCTCTG CTGCTGATGGTGCCATTTGCAGAAGCATATGATCCTCTCGATCCAAATGGGAATATCACA ATCAAGTGGGACATCACACAGTGGACCCCAGATGGCTATGTTGCTGTTGTTACCATATAC AACTTCCAGAAGTACCGTCATATCCAAGCGCCTGGTTGGAGTCTTGGGTGGGCTTGGGCA AAGAAAGAGATCATTTGGTCCATGGCTGGTGGGCAGGCCACAGAACAAGGTGATTGCTCG GCATTCAAAGCAAATATACCGCACTGCTGCAAGAGGGATCCGAGAGTTGTCGACTTAGTT CCTGGGGCGCCTTACAACATGCAGTTTGGAAATTGTTGCAAAGGAGGAGTGCTTACCTCA TGGGTGCAGGACCCACTAAACGCAGTAGCATCATTTCAGATCACTGTTGGACATTCTGGG ACTAGCAATAAGACAGTAAAAGCGCCGAAGAACTTCACTCTAAAGGCCCCAGGTCCAGGA TATAGTTGCGGATTAGCGCAAGAAGTGAAACCTCCTACTAGGTTCATTTCACTGGATGGC AGAAGAACAACTCAAGCTCATGTGACTTGGAATGTGACATGCACATATTCGCAGTTTGTT GCTCAAAGAGCTCCAACTTGTTGTGTTTCACTTTCATCGTTTTACAATGAGACAATAGTT AACTGCCCGAAATGTGCGTGTGGCTGCCAGAATAAGAAGCCAGGAAGCTGTGTGGAGGGT AATTCGCCTTATTTGGCGTCTGTGGTGAATGGACCTGGCAAGGGCAGCTTGACTCCTCTA GTTCAATGCACACCACACATGTGCCCAATAAGAGTGCATTGGCATGTTAAGCTCAATTAC AGGGACTATTGGAGGGTTAAGGTCACAATCACAAATTGGAATTACCGGATGAACTACTCG CAGTGGAACTTAGTAGTTCAACACCCAAATTTTGAAAACGTCTCTACTGTTTTCAGCTTC AACTACAAATCTTTGAACCCCTATGGAGTAATAAATGACACTGCAATGATGTGGGGTGTC AAGTACTACAACGACCTGCTTATGGTGGCTGGGCCAGATGGAAATGTCCAATCCGAGCTT CTATTCCGGAAGGACCGGTCAACCTTCACCTTTGACAAGGGTTGGGCTTTTCCAAGGCGC ATATACTTCAATGGCGAAAGTTGTGTCATGCCTTCACCAGATCTGTACCCATGGTTACCC CCCTCTTCTACTCCTAGATTTAGGACTGTATTCCTTCTCATGTCATTCCTGGTTTGTGGA ACATTAGCATTCTTGCACAACCACCTAGTTTTAGACAAAAACTGTGGAAAGTGCTGA

Peptide Sequence

PEP ID	Os03t0416300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:17262473:17266217:-1 gene:Os03g0416300 transcript:Os03t0416300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BC1L2 description:Similar to Phytochelatin synthetase (Fragment). (Os03t0416300-01);Similar to COBRA-like protein 2. (Os03t0416300-02)
Sequence	MARFLLGAAAIALLAGVSSLLLMVPFAEAYDPLDPNGNITIKWDITQWTPDGYVAVVTIY NFQKYRHIQAPGWSLGWAWAKKEIIWSMAGGQATEQGDCSAFKANIPHCCKRDPRVVDLV PGAPYNMQFGNCCKGGVLTSWVQDPLNAVASFQITVGHSGTSNKTVKAPKNFTLKAPGPG YSCGLAQEVKPPTRFISLDGRRTTQAHVTWNVTCTYSQFVAQRAPTCCVSLSSFYNETIV NCPKCACGCQNKKPGSCVEGNSPYLASVVNGPGKGSLTPLVQCTPHMCPIRVHWHVKLNY RDYWRVKVTITNWNYRMNYSQWNLVVQHPNFENVSTVFSFNYKSLNPYGVINDTAMMWGV KYYNDLLMVAGPDGNVQSELLFRKDRSTFTFDKGWAFPRRIYFNGESCVMPSPDLYPWLP PSSTPRFRTVFLLMSFLVCGTLAFLHNHLVLDKNCGKC

Transcript Sequence

Transcript ID	Os03t0416300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:17262473:17266217:-1 gene:Os03g0416300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BC1L2 description:Similar to Phytochelatin synthetase (Fragment). (Os03t0416300-01);Similar to COBRA-like protein 2. (Os03t0416300-02)
Sequence	AAAGGTGCACCCGGCCCCGCCCCTCCCGCGAGAGCACTTCGGTTTTAATCGCCGGGAGAA AAAAAATAAATGGGAGGGGCGGTTTGGGGAAGAAGAAGTTGAAGAAGGAGAGGAGGACGC TGAAAAGACCAAGCAACAAGAAGGGAGTCCCTCTTTCTCTTTGGGAGTGGAGAGAGAGAG AGAGAGAGAGGCATCGGCCATGGCGAGGTTTCTCCTGGGTGCGGCCGCCATTGCGCTGCT CGCCGGCGTGTCGTCTCTGCTGCTGATGGTGCCATTTGCAGAAGCATATGATCCTCTCGA TCCAAATGGGAATATCACAATCAAGTGGGACATCACACAGTGGACCCCAGATGGCTATGT TGCTGTTGTTACCATATACAACTTCCAGAAGTACCGTCATATCCAAGCGCCTGGTTGGAG TCTTGGGTGGGCTTGGGCAAAGAAAGAGATCATTTGGTCCATGGCTGGTGGGCAGGCCAC AGAACAAGGTGATTGCTCGGCATTCAAAGCAAATATACCGCACTGCTGCAAGAGGGATCC GAGAGTTGTCGACTTAGTTCCTGGGGCGCCTTACAACATGCAGTTTGGAAATTGTTGCAA AGGAGGAGTGCTTACCTCATGGGTGCAGGACCCACTAAACGCAGTAGCATCATTTCAGAT CACTGTTGGACATTCTGGGACTAGCAATAAGACAGTAAAAGCGCCGAAGAACTTCACTCT AAAGGCCCCAGGTCCAGGATATAGTTGCGGATTAGCGCAAGAAGTGAAACCTCCTACTAG GTTCATTTCACTGGATGGCAGAAGAACAACTCAAGCTCATGTGACTTGGAATGTGACATG CACATATTCGCAGTTTGTTGCTCAAAGAGCTCCAACTTGTTGTGTTTCACTTTCATCGTT TTACAATGAGACAATAGTTAACTGCCCGAAATGTGCGTGTGGCTGCCAGAATAAGAAGCC AGGAAGCTGTGTGGAGGGTAATTCGCCTTATTTGGCGTCTGTGGTGAATGGACCTGGCAA GGGCAGCTTGACTCCTCTAGTTCAATGCACACCACACATGTGCCCAATAAGAGTGCATTG GCATGTTAAGCTCAATTACAGGGACTATTGGAGGGTTAAGGTCACAATCACAAATTGGAA TTACCGGATGAACTACTCGCAGTGGAACTTAGTAGTTCAACACCCAAATTTTGAAAACGT CTCTACTGTTTTCAGCTTCAACTACAAATCTTTGAACCCCTATGGAGTAATAAATGACAC TGCAATGATGTGGGGTGTCAAGTACTACAACGACCTGCTTATGGTGGCTGGGCCAGATGG AAATGTCCAATCCGAGCTTCTATTCCGGAAGGACCGGTCAACCTTCACCTTTGACAAGGG TTGGGCTTTTCCAAGGCGCATATACTTCAATGGCGAAAGTTGTGTCATGCCTTCACCAGA TCTGTACCCATGGTTACCCCCCTCTTCTACTCCTAGATTTAGGACTGTATTCCTTCTCAT GTCATTCCTGGTTTGTGGAACATTAGCATTCTTGCACAACCACCTAGTTTTAGACAAAAA CTGTGGAAAGTGCTGACCACATTGGGCATTGGCTGTTGACATACTGAGTCTTTTGGAAGT TTAGGGTGTGCTCTTGCATGAAAAGCTAATTCGCGTTTGATTTAGGTTGTAAGTTTAGGT TCCTCGAAATCATTAAAGTTTGGGTTGTACATTCTGATGGTGTGTATTCTTGGTCTGAAG TGTGAAGACTAATTGAGAACCCCAAGTCCCAACATTAATTGTCTAGAGAAATGTTTGCC