Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0416200-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:17260437:17262351:1 gene:Os03g0416200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BRITTLE CULM 1 description:BRITTLE CULM1. (Os03t0416200-01);BRITTLE CULM1. (Os03t0416200-02)
Sequence	ATGGAGCTGCACAGATGCTCTCTCCTCGCTCTGCTCCTCGCCGTGACATGCTCGGTTGCA GTGGCGTATGATCCGCTGGACCCGAAGGGGAACATCACGATAAAGTGGGACGTGATATCG TGGACGCCCGACGGGTACGTGGCGATGGTGACGATGAGCAACTACCAGATGTACCGGCAG ATCCTGGCGCCCGGGTGGACAGTGGGGTGGTCGTGGGCCAAGAAGGAGGTCATCTGGTCC ATCGTGGGGGCCCAGGCCACCGAGCAGGGCGACTGCTCCAAGTTCAAGGGCGGCATCCCC CACAGCTGCAAGCGCACCCCGGCCATCGTCGACCTCCTCCCCGGCGTCCCCTACAACCAG CAGATCGCCAACTGCTGCAAGGCCGGCGTCGTCTCCGCCTACGGCCAGGACCCCGCCGGA TCCGTCTCCGCCTTCCAGGTCTCCGTCGGCCTCGCCGGCACCACCAACAAGACCGTCAAG CTACCCACCAACTTCACCCTCGCCGGCCCGGGACCCGGGTACACGTGTGGCCCGGCCACC ATCGTCCCTTCCACCGTCTACCTCACCCCGGACCGGCGCCGCCGCACCCAGGCGCTCATG ACGTGGACCGTCACCTGCACCTACTCCCAGCAGCTGGCGTCGCGCTACCCGACCTGCTGC GTCTCCTTCTCCTCCTTCTACAACAGCACCATCGTGCCGTGCGCCAGGTGCGCCTGCGGG TGCGGCCACGACGGCTACCGCGGCAACGGCGGCGGCGGGAAGAACGCCCGCGCCGGCGAC GGACGCAGCAGACGCAACAGCGGCGGCGGCGGAGGGCACAGCGGCGGCACCGAGTGCATC ATGGGCGACTCGAAGCGGGCGCTGTCGGCGGGGGTGAACACGCCGCGCAAGGACGGGGCG CCGCTGCTGCAGTGCACGTCGCACATGTGCCCGATCCGCGTGCACTGGCACGTCAAGCTC AACTACAAGGACTACTGGCGCGCCAAGATCGCCATCACAAACTTCAACTACCGCATGAAC TACACCCAGTGGACGCTCGTCGCCCAGCACCCCAACCTCAACAACGTCACCGAGGTCTTC AGCTTCCAGTACAAGCCCCTCCTCCCCTACGGCAACATCAACGACACCGGCATGTTCTAC GGGCTCAAGTTCTACAACGACCTGCTCATGGAGGCAGGGCCGTTCGGCAACGTGCAGTCG GAGGTGCTGATGCGAAAGGACTACAACACCTTCACCTTCAGCCAGGGCTGGGCGTTCCCG CGCAAGATCTACTTCAACGGCGACGAGTGCAAGATGCCGCCGCCGGACTCCTACCCCTAC CTACCCAACTCCGCTCCGATCGGGCCGCCGCGTTCCGTGGCCGCCGCCGCCTCGGCGATC TTGGTGGTGCTCCTCCTGGTGGCATGA

Peptide Sequence

PEP ID	Os03t0416200-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:17260437:17262351:1 gene:Os03g0416200 transcript:Os03t0416200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BRITTLE CULM 1 description:BRITTLE CULM1. (Os03t0416200-01);BRITTLE CULM1. (Os03t0416200-02)
Sequence	MELHRCSLLALLLAVTCSVAVAYDPLDPKGNITIKWDVISWTPDGYVAMVTMSNYQMYRQ ILAPGWTVGWSWAKKEVIWSIVGAQATEQGDCSKFKGGIPHSCKRTPAIVDLLPGVPYNQ QIANCCKAGVVSAYGQDPAGSVSAFQVSVGLAGTTNKTVKLPTNFTLAGPGPGYTCGPAT IVPSTVYLTPDRRRRTQALMTWTVTCTYSQQLASRYPTCCVSFSSFYNSTIVPCARCACG CGHDGYRGNGGGGKNARAGDGRSRRNSGGGGGHSGGTECIMGDSKRALSAGVNTPRKDGA PLLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNFNYRMNYTQWTLVAQHPNLNNVTEVF SFQYKPLLPYGNINDTGMFYGLKFYNDLLMEAGPFGNVQSEVLMRKDYNTFTFSQGWAFP RKIYFNGDECKMPPPDSYPYLPNSAPIGPPRSVAAAASAILVVLLLVA

Transcript Sequence

Transcript ID	Os03t0416200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:17260437:17262351:1 gene:Os03g0416200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BRITTLE CULM 1 description:BRITTLE CULM1. (Os03t0416200-01);BRITTLE CULM1. (Os03t0416200-02)
Sequence	GCTCACCTCGATCGAGTAGCTGCTGCTGCTGTGCTAGCTTGCTCGCCGGCCGGTGAGGTC GACGATGGAGCTGCACAGATGCTCTCTCCTCGCTCTGCTCCTCGCCGTGACATGCTCGGT TGCAGTGGCGTATGATCCGCTGGACCCGAAGGGGAACATCACGATAAAGTGGGACGTGAT ATCGTGGACGCCCGACGGGTACGTGGCGATGGTGACGATGAGCAACTACCAGATGTACCG GCAGATCCTGGCGCCCGGGTGGACAGTGGGGTGGTCGTGGGCCAAGAAGGAGGTCATCTG GTCCATCGTGGGGGCCCAGGCCACCGAGCAGGGCGACTGCTCCAAGTTCAAGGGCGGCAT CCCCCACAGCTGCAAGCGCACCCCGGCCATCGTCGACCTCCTCCCCGGCGTCCCCTACAA CCAGCAGATCGCCAACTGCTGCAAGGCCGGCGTCGTCTCCGCCTACGGCCAGGACCCCGC CGGATCCGTCTCCGCCTTCCAGGTCTCCGTCGGCCTCGCCGGCACCACCAACAAGACCGT CAAGCTACCCACCAACTTCACCCTCGCCGGCCCGGGACCCGGGTACACGTGTGGCCCGGC CACCATCGTCCCTTCCACCGTCTACCTCACCCCGGACCGGCGCCGCCGCACCCAGGCGCT CATGACGTGGACCGTCACCTGCACCTACTCCCAGCAGCTGGCGTCGCGCTACCCGACCTG CTGCGTCTCCTTCTCCTCCTTCTACAACAGCACCATCGTGCCGTGCGCCAGGTGCGCCTG CGGGTGCGGCCACGACGGCTACCGCGGCAACGGCGGCGGCGGGAAGAACGCCCGCGCCGG CGACGGACGCAGCAGACGCAACAGCGGCGGCGGCGGAGGGCACAGCGGCGGCACCGAGTG CATCATGGGCGACTCGAAGCGGGCGCTGTCGGCGGGGGTGAACACGCCGCGCAAGGACGG GGCGCCGCTGCTGCAGTGCACGTCGCACATGTGCCCGATCCGCGTGCACTGGCACGTCAA GCTCAACTACAAGGACTACTGGCGCGCCAAGATCGCCATCACAAACTTCAACTACCGCAT GAACTACACCCAGTGGACGCTCGTCGCCCAGCACCCCAACCTCAACAACGTCACCGAGGT CTTCAGCTTCCAGTACAAGCCCCTCCTCCCCTACGGCAACATCAACGACACCGGCATGTT CTACGGGCTCAAGTTCTACAACGACCTGCTCATGGAGGCAGGGCCGTTCGGCAACGTGCA GTCGGAGGTGCTGATGCGAAAGGACTACAACACCTTCACCTTCAGCCAGGGCTGGGCGTT CCCGCGCAAGATCTACTTCAACGGCGACGAGTGCAAGATGCCGCCGCCGGACTCCTACCC CTACCTACCCAACTCCGCTCCGATCGGGCCGCCGCGTTCCGTGGCCGCCGCCGCCTCGGC GATCTTGGTGGTGCTCCTCCTGGTGGCATGATCAGAAAAATGTCCCCTTTTGCTTTGTCT TCTTGATAATTCCCACATGTTTGGAGAGCAGTGTAGGTAGGGGCATTTTGGTCTATTCAT ACTGGATATTCAGTCAAAGAGGAAATCTGTGATATTGTGTTAACTTTGAAATTGCCTGAT AGATCTCCATAATGTACAACACAATCAGGCTGGAAGAGTTTTGGTCAGTCCCCAGTTAGG CCAGCCCTGAGAAATCACACCACAAACTTTTCTGC