Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0413400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:17109195:17113767:-1 gene:Os03g0413400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 8 protein. (Os03t0413400-01)
Sequence	ATGCCCCCCGTCAGGTCCGCCCCCGGGAGGCGGGCGCCGGAATTCCGGCGCTCGTCGCGG CGGCGGCTGCCGGAGTGGATCTGGTGGCTCGTCGGGATCTTCCTCGTCCTCGGCCTCATG CTCTTCGTCCTGCACCACAACCAGAGGGAGCATTTCCGCCCGCCCGTAGTCGATAAGGGT TCAGAATTTGAGGAAACCCATCATGAGAAAGTAAATTTCACAGAAGAGCTTTTAAGCAGT ACATCATTTGCACGCCAATTGACAGATCAAATGACTCTAGCAAAGGCTTATGTTGTCCTT GCAAAAGAGCATGGCAACCTTCAGCTTGCATGGGAGCTTAGTTCACAGATAAGGAATTGT CAAAGATTGCTATCTGAAGAAGCTGTTAGTGGGAAGGCCATCACTAAAGAAGAAGCCCAT CCAATAATAACTCGGCTTGCACGGTTAATATACAAAGCACAGGACTCTCATTATGATATC AGCACAACAATTGTAACACTGAAGAGCCTTGTCAATGCACTTGAGGAGCGTGCAAAGGCA GCAGTTGTTCAGACTGCTGAGTTTGGTCAGTTAGCTGCAGAGTCCGTCCCCAAGAATTTG CACTGTTTAACTGTTAAACTGACGGTAGAGTGGCTTCAGAACCCAAAACATAGGGGTCGC TCAGAAGAACATCGGAACTCCACACGATTGGTAGACAATAATCTGTACCATTTTGCCATA TTCTCTGATAATGTTCTTGCCACATCAGTTGTTGTCAATTCTACAGTCTCAAATGCAAAC CACCCTCAACAGCTTGTATTTCATGTGGTCACAGACAGGGTCCACTTTGGGGCTATGTCA ACTTGGTTCCTCATAAATGACTTCAAAGGGTGCACTGTTGAAGTCCGCTGCATAGATGAG TTCACATGGTTGAATGCTGCTGCTTCTCCTCTGGTTAGGCAGCTATCTGAGATGGAAACT CAGGGTTTCTACTATGGTGATTCTAAAAATCTTGAAAGAGAAATAAAGTTCCATAATCCC AAGTTTGTTTCTCTGTTGAACCATTTGCGGTTCTACATTCCTCAAATACTACCTAATTTG GAGAAGGTGGTTTTTCTCGATGATGATGTTGTGGTACAGAAGGACTTGACACAGCTATTT TCGATAGAGTTGCACGGTAATGTTATTGGAGCAGTGGAGACTTGTTTAGAGTCATTTCAT CGGTATCACAAGTATCTTAATTTCTCCCACCCAATTATCAGCTCCAAAATTGATCCGCAT ACTTGTGGGTGGGCTTTTGGGATGAACATCTTTGACTTAATAGCCTGGAGGAAGGCAAAT GCCACAGCACTTTATCATTATTGGCAAGAGCAAAATGCTGATCTATTGCTCTGGAGGACA GGGACACTTCCTGCAGGCCTTTTGACGTTCTATGGCCTGATGGAACCCCTAGATCGCAGA TGGCATGTCTTGGGGCTAGGATATGATGTTGACATAGATGATCGTTTGATTGAGAGTGCC GCTGTCGTGCACTACAATGGGAATATGAAACCATGGCTGAAGTTAGCCATTCGTCGGTAC AAGTATATATGGGAGCGGTATGTCAATTTCACACACCCATATGTTAGAGAGTGTTTGTTG CATTAG

Peptide Sequence

PEP ID	Os03t0413400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:17109195:17113767:-1 gene:Os03g0413400 transcript:Os03t0413400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 8 protein. (Os03t0413400-01)
Sequence	MPPVRSAPGRRAPEFRRSSRRRLPEWIWWLVGIFLVLGLMLFVLHHNQREHFRPPVVDKG SEFEETHHEKVNFTEELLSSTSFARQLTDQMTLAKAYVVLAKEHGNLQLAWELSSQIRNC QRLLSEEAVSGKAITKEEAHPIITRLARLIYKAQDSHYDISTTIVTLKSLVNALEERAKA AVVQTAEFGQLAAESVPKNLHCLTVKLTVEWLQNPKHRGRSEEHRNSTRLVDNNLYHFAI FSDNVLATSVVVNSTVSNANHPQQLVFHVVTDRVHFGAMSTWFLINDFKGCTVEVRCIDE FTWLNAAASPLVRQLSEMETQGFYYGDSKNLEREIKFHNPKFVSLLNHLRFYIPQILPNL EKVVFLDDDVVVQKDLTQLFSIELHGNVIGAVETCLESFHRYHKYLNFSHPIISSKIDPH TCGWAFGMNIFDLIAWRKANATALYHYWQEQNADLLLWRTGTLPAGLLTFYGLMEPLDRR WHVLGLGYDVDIDDRLIESAAVVHYNGNMKPWLKLAIRRYKYIWERYVNFTHPYVRECLL H

Transcript Sequence

Transcript ID	Os03t0413400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:17109195:17113767:-1 gene:Os03g0413400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 8 protein. (Os03t0413400-01)
Sequence	TAATTGGCCCCCCCTCCGCGGCCTCCGCTCACCTCTCCTCCTCCTCGCGATTTCCACCCG CACCGCCGCCTGCGCCGATCTCTCCATTCCCGCGACCACCGCCGCCCGCCGCCCGCCGCA TCTGGCCACCACCTATGCCCCCCGTCAGGTCCGCCCCCGGGAGGCGGGCGCCGGAATTCC GGCGCTCGTCGCGGCGGCGGCTGCCGGAGTGGATCTGGTGGCTCGTCGGGATCTTCCTCG TCCTCGGCCTCATGCTCTTCGTCCTGCACCACAACCAGAGGGAGCATTTCCGCCCGCCCG TAGTCGATAAGGGTTCAGAATTTGAGGAAACCCATCATGAGAAAGTAAATTTCACAGAAG AGCTTTTAAGCAGTACATCATTTGCACGCCAATTGACAGATCAAATGACTCTAGCAAAGG CTTATGTTGTCCTTGCAAAAGAGCATGGCAACCTTCAGCTTGCATGGGAGCTTAGTTCAC AGATAAGGAATTGTCAAAGATTGCTATCTGAAGAAGCTGTTAGTGGGAAGGCCATCACTA AAGAAGAAGCCCATCCAATAATAACTCGGCTTGCACGGTTAATATACAAAGCACAGGACT CTCATTATGATATCAGCACAACAATTGTAACACTGAAGAGCCTTGTCAATGCACTTGAGG AGCGTGCAAAGGCAGCAGTTGTTCAGACTGCTGAGTTTGGTCAGTTAGCTGCAGAGTCCG TCCCCAAGAATTTGCACTGTTTAACTGTTAAACTGACGGTAGAGTGGCTTCAGAACCCAA AACATAGGGGTCGCTCAGAAGAACATCGGAACTCCACACGATTGGTAGACAATAATCTGT ACCATTTTGCCATATTCTCTGATAATGTTCTTGCCACATCAGTTGTTGTCAATTCTACAG TCTCAAATGCAAACCACCCTCAACAGCTTGTATTTCATGTGGTCACAGACAGGGTCCACT TTGGGGCTATGTCAACTTGGTTCCTCATAAATGACTTCAAAGGGTGCACTGTTGAAGTCC GCTGCATAGATGAGTTCACATGGTTGAATGCTGCTGCTTCTCCTCTGGTTAGGCAGCTAT CTGAGATGGAAACTCAGGGTTTCTACTATGGTGATTCTAAAAATCTTGAAAGAGAAATAA AGTTCCATAATCCCAAGTTTGTTTCTCTGTTGAACCATTTGCGGTTCTACATTCCTCAAA TACTACCTAATTTGGAGAAGGTGGTTTTTCTCGATGATGATGTTGTGGTACAGAAGGACT TGACACAGCTATTTTCGATAGAGTTGCACGGTAATGTTATTGGAGCAGTGGAGACTTGTT TAGAGTCATTTCATCGGTATCACAAGTATCTTAATTTCTCCCACCCAATTATCAGCTCCA AAATTGATCCGCATACTTGTGGGTGGGCTTTTGGGATGAACATCTTTGACTTAATAGCCT GGAGGAAGGCAAATGCCACAGCACTTTATCATTATTGGCAAGAGCAAAATGCTGATCTAT TGCTCTGGAGGACAGGGACACTTCCTGCAGGCCTTTTGACGTTCTATGGCCTGATGGAAC CCCTAGATCGCAGATGGCATGTCTTGGGGCTAGGATATGATGTTGACATAGATGATCGTT TGATTGAGAGTGCCGCTGTCGTGCACTACAATGGGAATATGAAACCATGGCTGAAGTTAG CCATTCGTCGGTACAAGTATATATGGGAGCGGTATGTCAATTTCACACACCCATATGTTA GAGAGTGTTTGTTGCATTAGAAAGTCTGCAATCACTGTTCACCATGAATGTGTCATGCCA TTGAAGCTAGGCGCTTCGGTTTCTTACATGGAGTTGCTTTTTGGCACCTTGTTTAAGAAA TCCTTCGGAGAGGTAGATTATATACTCAAGAGACAGCATCAAAGAAGCCAACTGTTAAAA TTTCTTTTTGGGTGGGGGACTTGGGGGAGATTCATTTTGAGATGAAAATAATTCCTTTGC AGATTTTTACATACAATTTGGACTGGAAATTTTAGCAGTCTAACCAGATCATCTGGATAG ATATTGTAAAAGAGATATAGGTGTTGGATCGATGGGGTCAATTTTTGAGATGTAGGAAAT GCCAATTGCCGATTCAGCTGTTCAGAGTTGCTGGTGTTACATTCTTTCCAGAACATTGTG TTTTATACTGGTGAAGAAGCTTCTCCTTTTCTCTTTGTATAAACAGCTCTGTATTCTTCA TACAGTATGAACTCAGCTCATTTGATAAAAGGAAATCAAAATCATTTTGATGTGCTG