Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0412900-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:17077854:17084040:1 gene:Os03g0412900 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEK, C-terminal domain containing protein. (Os03t0412900-00)
Sequence	ATGGACTGCGAGAACGGCGCCGCTGGCGAGGATCGATCCAAGGTTAGCGAGATCCCCATT CCTCCATTGTTCCGTTTTGTGCGGCTGTCTGAGGGTGTCATGCGTCCATGTCCTGAAAAT TCACGGGCAGAGCTACTGGAGAAGTTCAACAAATGTAACAAAGATACACTCGTTGAACTG ATCCGTTCATTTGATATGACTGGTTCAAAAGCTAATAGGAAGGAGGAACTTGTGACAAAA TTGATGGAGTTCTTCAAAGTACACTGTCCTGATACTAACAGCGCATACCTTGATAAGGCC TTACAGTTTGGTGACCTTCATTATCAGATAAATGACTTCAAAGAACAAACCCTCCAACTT GCTAGGCTTGCATTTCATGAAGAAGAGGAAAAATCACAGGCAGAGCTTCTGGAGAAGCTC AACAAATCTAACAAAGATACTATAGTTGAACTTTGCCGTTCATTTGATATCATTGGCTCA AAAGCTAACAGGAAGGAGGAATTAGTAATAATTATGATGGAGTTCTTGAAGGAACACTGT TCTGGGACTGATGCCACAGACCCTGATAAGAAAACTAAGAAAAGAAGGCGTAAGAATGAA GTTACACATCTATCTGGCAGTAAACCTTTGAAGAAAATGAAACTTGATGGAACTTCACTG GAAATTCATGGTGAAGAGGAAGATAGTGGGGCTAAGTATGAGGAGAATATAACAAAATAC TCGGAGTGTGACTTGGACGACAACAACAATGAATGTGCTAATAATGAGAAAGGACGATTT CCAAAGAATAAGGCCAGCCTTGAGCCTTCTGAAAGGGTAAATGATGTGCCAAAGAATTTT GTTGGAGCAGCTCCCACTGAAGTTCAAATACTTTCAAATGAACAAGCACTATCTAAGACA CCGTTTGCAAAGGTGGTTAGCACCGTTGAAGGAGATAGAACTGACATGAAGACTTCTGGA AAGAAAAATGCTTCTATCACCAAGAAAAAAATGACCTCTAAGACAGATCGCAAGGAAAAA TTTTGTGGTAAACAGATGTACAAAGGAGATGGGAAACCTCGGAAACTGGCAGCAATACCA AACAGGGATGAGCTGAGGCAAGCTGTCTTCTTGATCTTAGATTCTGCAGATTTTGCGACG ATGACTTTTGGAGATGTTGTGAAAGAAGTCGACAAATACTTTGGCAAGGATCTCTTTGAG AAAAAGCCACTTATAAGATCCCTGATAGAAGAAGAGCTCTTTAGGCTAGGGGAGGAAGCT GAGAAGAAAGAACTGGAAGAAGAAGCGGCAGAAGTAAAAGCTAGAGCTGAACAAGCTGCG AAGGAAGGGACAAATGCTGGAGTTAATTCAGGTATAGACACGGCGGAAGCACTTCAAGTT AAGGATGGCAAATCTGAAGATGCTGCAAAGAACAAACGTGACAATAGTGCTGAAAATGGT CCGAAAGGTGGGGTATCTGTAGAAGTTGCTGAGAACATAAACAGAAGTGCGGCTGCTGAA AGTTCGCAGGATGGACGGTGTGAACATGACAGAGAGAATGCAAACAATGGTGGTGACTTT ATCAGGGATGATAATGCTGTGCAGGATACTATCAGTGGTGATCATGTGGAATATTCCAGA GATGGTGAAGCTGAAAGGGCAAAGATGAACAGTAATGGTGAAGCCGTAGAAGCCGTAGAT GGCGGAACTGAAGCATCAAAAGGTGGAGAAAGTGCTGACCCCAAAGATGATAACAACCGA AATGGCGATAAAAGTGCACTAGATATTGATGATCGTGGAGCTGAAGATTCTCACTGCAAC AAAAACGGTGAAAATGTAGCTTGTGTGGAAAATGGCAAAACTAATGAAGCTGGCAACACT GAGAACGGTGAAAATGTGGTATCCCACGATGCTGAAAAGGATGATAAAAGAAAGGATCCC ATTCAAAATGCAAACCCCGAACAGACCCTAACAGATGCTGGTGATGATGGTAAAACTGAA GATGCCGAGCACAACGCCAACACCGAAGCTGATGTTGATTCTTGTGCCGATGGTACTGCT GAGAATTAG

Peptide Sequence

PEP ID	Os03t0412900-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:17077854:17084040:1 gene:Os03g0412900 transcript:Os03t0412900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEK, C-terminal domain containing protein. (Os03t0412900-00)
Sequence	MDCENGAAGEDRSKVSEIPIPPLFRFVRLSEGVMRPCPENSRAELLEKFNKCNKDTLVEL IRSFDMTGSKANRKEELVTKLMEFFKVHCPDTNSAYLDKALQFGDLHYQINDFKEQTLQL ARLAFHEEEEKSQAELLEKLNKSNKDTIVELCRSFDIIGSKANRKEELVIIMMEFLKEHC SGTDATDPDKKTKKRRRKNEVTHLSGSKPLKKMKLDGTSLEIHGEEEDSGAKYEENITKY SECDLDDNNNECANNEKGRFPKNKASLEPSERVNDVPKNFVGAAPTEVQILSNEQALSKT PFAKVVSTVEGDRTDMKTSGKKNASITKKKMTSKTDRKEKFCGKQMYKGDGKPRKLAAIP NRDELRQAVFLILDSADFATMTFGDVVKEVDKYFGKDLFEKKPLIRSLIEEELFRLGEEA EKKELEEEAAEVKARAEQAAKEGTNAGVNSGIDTAEALQVKDGKSEDAAKNKRDNSAENG PKGGVSVEVAENINRSAAAESSQDGRCEHDRENANNGGDFIRDDNAVQDTISGDHVEYSR DGEAERAKMNSNGEAVEAVDGGTEASKGGESADPKDDNNRNGDKSALDIDDRGAEDSHCN KNGENVACVENGKTNEAGNTENGENVVSHDAEKDDKRKDPIQNANPEQTLTDAGDDGKTE DAEHNANTEADVDSCADGTAEN

Transcript Sequence

Transcript ID	Os03t0412900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:17077854:17084040:1 gene:Os03g0412900 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEK, C-terminal domain containing protein. (Os03t0412900-00)
Sequence	ATGGACTGCGAGAACGGCGCCGCTGGCGAGGATCGATCCAAGGTTAGCGAGATCCCCATT CCTCCATTGTTCCGTTTTGTGCGGCTGTCTGAGGGTGTCATGCGTCCATGTCCTGAAAAT TCACGGGCAGAGCTACTGGAGAAGTTCAACAAATGTAACAAAGATACACTCGTTGAACTG ATCCGTTCATTTGATATGACTGGTTCAAAAGCTAATAGGAAGGAGGAACTTGTGACAAAA TTGATGGAGTTCTTCAAAGTACACTGTCCTGATACTAACAGCGCATACCTTGATAAGGCC TTACAGTTTGGTGACCTTCATTATCAGATAAATGACTTCAAAGAACAAACCCTCCAACTT GCTAGGCTTGCATTTCATGAAGAAGAGGAAAAATCACAGGCAGAGCTTCTGGAGAAGCTC AACAAATCTAACAAAGATACTATAGTTGAACTTTGCCGTTCATTTGATATCATTGGCTCA AAAGCTAACAGGAAGGAGGAATTAGTAATAATTATGATGGAGTTCTTGAAGGAACACTGT TCTGGGACTGATGCCACAGACCCTGATAAGAAAACTAAGAAAAGAAGGCGTAAGAATGAA GTTACACATCTATCTGGCAGTAAACCTTTGAAGAAAATGAAACTTGATGGAACTTCACTG GAAATTCATGGTGAAGAGGAAGATAGTGGGGCTAAGTATGAGGAGAATATAACAAAATAC TCGGAGTGTGACTTGGACGACAACAACAATGAATGTGCTAATAATGAGAAAGGACGATTT CCAAAGAATAAGGCCAGCCTTGAGCCTTCTGAAAGGGTAAATGATGTGCCAAAGAATTTT GTTGGAGCAGCTCCCACTGAAGTTCAAATACTTTCAAATGAACAAGCACTATCTAAGACA CCGTTTGCAAAGGTGGTTAGCACCGTTGAAGGAGATAGAACTGACATGAAGACTTCTGGA AAGAAAAATGCTTCTATCACCAAGAAAAAAATGACCTCTAAGACAGATCGCAAGGAAAAA TTTTGTGGTAAACAGATGTACAAAGGAGATGGGAAACCTCGGAAACTGGCAGCAATACCA AACAGGGATGAGCTGAGGCAAGCTGTCTTCTTGATCTTAGATTCTGCAGATTTTGCGACG ATGACTTTTGGAGATGTTGTGAAAGAAGTCGACAAATACTTTGGCAAGGATCTCTTTGAG AAAAAGCCACTTATAAGATCCCTGATAGAAGAAGAGCTCTTTAGGCTAGGGGAGGAAGCT GAGAAGAAAGAACTGGAAGAAGAAGCGGCAGAAGTAAAAGCTAGAGCTGAACAAGCTGCG AAGGAAGGGACAAATGCTGGAGTTAATTCAGGTATAGACACGGCGGAAGCACTTCAAGTT AAGGATGGCAAATCTGAAGATGCTGCAAAGAACAAACGTGACAATAGTGCTGAAAATGGT CCGAAAGGTGGGGTATCTGTAGAAGTTGCTGAGAACATAAACAGAAGTGCGGCTGCTGAA AGTTCGCAGGATGGACGGTGTGAACATGACAGAGAGAATGCAAACAATGGTGGTGACTTT ATCAGGGATGATAATGCTGTGCAGGATACTATCAGTGGTGATCATGTGGAATATTCCAGA GATGGTGAAGCTGAAAGGGCAAAGATGAACAGTAATGGTGAAGCCGTAGAAGCCGTAGAT GGCGGAACTGAAGCATCAAAAGGTGGAGAAAGTGCTGACCCCAAAGATGATAACAACCGA AATGGCGATAAAAGTGCACTAGATATTGATGATCGTGGAGCTGAAGATTCTCACTGCAAC AAAAACGGTGAAAATGTAGCTTGTGTGGAAAATGGCAAAACTAATGAAGCTGGCAACACT GAGAACGGTGAAAATGTGGTATCCCACGATGCTGAAAAGGATGATAAAAGAAAGGATCCC ATTCAAAATGCAAACCCCGAACAGACCCTAACAGATGCTGGTGATGATGGTAAAACTGAA GATGCCGAGCACAACGCCAACACCGAAGCTGATGTTGATTCTTGTGCCGATGGTACTGCT GAGAATTAG