Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0411800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:17008027:17011263:-1 gene:Os03g0411800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC TRANSPORTER 2 description:Similar to Metal transport protein. (Os03t0411800-01)
Sequence

ATGGCGGGAGGCAGGGGAGCCCGCGCCAGCCTCCACCTCCACCTCGCCTGGCTCTGCGCC
TTCGCGACCACCGCGTGGGCGCATGGCGGTGGCGGCGGCGGGGGCGATTCTGACGCCGAC
GCCGACGGCGGCGGCGAGGGGAAGCCGGACCTGCGGGCGCGGGGGCTGGTGGCGGCGAAG
CTGTGGTGCTTGGCGGTGGTGTTCGCCGGGACGCTGGCCGGCGGCGTGTCCCCCTACTTC
ATGCGGTGGAACGATGCGTTCCTGGCGCTGGGCACGCAGTTCGCGGGGGGAGTCTTCCTC
GGCACCGCCATGATGCACTTCCTCGCCGACGCCAACGAGACTTTCGCCGACCTCCTCCCC
GGCACCGCCTACCCCTTCGCGTTCATGCTCGCCTGCGCCGGCTACGTCCTCACCATGCTC
GCCGACTGCGCCATCTCCTTCGTCGTCGCCCGCGGCGGCGGCCGGACCGAACCCGCCGCC
GCCGCCGGTGCAGGGCTGGAGGAGGGTAAGCTGAGCAGCACAAATGGCAACGCCTCTGAC
CCACCAGCAGCTGATGCGGCGGCGCAAGACCACTCCGTGGCGTCGATGCTGCGGAACGCG
AGCACGCTCGGCGACAGCGTGCTGCTCATCGCCGCGCTCTGCTTCCACTCCGTCTTCGAG
GGCATCGCCATCGGAGTCGCCGAGACGAAGGCTGACGCATGGAAGGCGCTGTGGACGATC
AGCCTGCACAAGATCTTCGCGGCCATCGCCATGGGCATCGCGCTGCTCCGGATGCTGCCG
GACCGGCCGTTCCTCTCCTGCTTCGGCTACGCCTTCGCCTTCGCCGTCTCCAGCCCCGTC
GGCGTCGGCATCGGCATCGTCATCGACGCCACCACGCAGGGCCGGGTGGCCGACTGGATC
TTCGCCGTCTCCATGGGCCTCGCCACCGGCATCTTCATCTACGTCTCCATCAACCACCTC
CTCTCCAAGGGCTACACCCCGCTGAGGCCCGTCGCCGCCGACACGCCGGCGGGGAGGCTG
CTCGCCGTCGTCCTCGGCGTCGCCGTCATCGCCGTCGTCATGATCTGGGACACCTGA

Peptide Sequence

PEP ID

Os03t0411800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:17008027:17011263:-1 gene:Os03g0411800 transcript:Os03t0411800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC TRANSPORTER 2 description:Similar to Metal transport protein. (Os03t0411800-01)
Sequence

MAGGRGARASLHLHLAWLCAFATTAWAHGGGGGGGDSDADADGGGEGKPDLRARGLVAAK
LWCLAVVFAGTLAGGVSPYFMRWNDAFLALGTQFAGGVFLGTAMMHFLADANETFADLLP
GTAYPFAFMLACAGYVLTMLADCAISFVVARGGGRTEPAAAAGAGLEEGKLSSTNGNASD
PPAADAAAQDHSVASMLRNASTLGDSVLLIAALCFHSVFEGIAIGVAETKADAWKALWTI
SLHKIFAAIAMGIALLRMLPDRPFLSCFGYAFAFAVSSPVGVGIGIVIDATTQGRVADWI
FAVSMGLATGIFIYVSINHLLSKGYTPLRPVAADTPAGRLLAVVLGVAVIAVVMIWDT

Transcript Sequence

Transcript ID

Os03t0411800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:17008027:17011263:-1 gene:Os03g0411800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC TRANSPORTER 2 description:Similar to Metal transport protein. (Os03t0411800-01)
Sequence

ACCATTTGGCGCACCCGTCATCGGTCGAACACCACACCTGCGTCCATGGCGGGAGGCAGG
GGAGCCCGCGCCAGCCTCCACCTCCACCTCGCCTGGCTCTGCGCCTTCGCGACCACCGCG
TGGGCGCATGGCGGTGGCGGCGGCGGGGGCGATTCTGACGCCGACGCCGACGGCGGCGGC
GAGGGGAAGCCGGACCTGCGGGCGCGGGGGCTGGTGGCGGCGAAGCTGTGGTGCTTGGCG
GTGGTGTTCGCCGGGACGCTGGCCGGCGGCGTGTCCCCCTACTTCATGCGGTGGAACGAT
GCGTTCCTGGCGCTGGGCACGCAGTTCGCGGGGGGAGTCTTCCTCGGCACCGCCATGATG
CACTTCCTCGCCGACGCCAACGAGACTTTCGCCGACCTCCTCCCCGGCACCGCCTACCCC
TTCGCGTTCATGCTCGCCTGCGCCGGCTACGTCCTCACCATGCTCGCCGACTGCGCCATC
TCCTTCGTCGTCGCCCGCGGCGGCGGCCGGACCGAACCCGCCGCCGCCGCCGGTGCAGGG
CTGGAGGAGGGTAAGCTGAGCAGCACAAATGGCAACGCCTCTGACCCACCAGCAGCTGAT
GCGGCGGCGCAAGACCACTCCGTGGCGTCGATGCTGCGGAACGCGAGCACGCTCGGCGAC
AGCGTGCTGCTCATCGCCGCGCTCTGCTTCCACTCCGTCTTCGAGGGCATCGCCATCGGA
GTCGCCGAGACGAAGGCTGACGCATGGAAGGCGCTGTGGACGATCAGCCTGCACAAGATC
TTCGCGGCCATCGCCATGGGCATCGCGCTGCTCCGGATGCTGCCGGACCGGCCGTTCCTC
TCCTGCTTCGGCTACGCCTTCGCCTTCGCCGTCTCCAGCCCCGTCGGCGTCGGCATCGGC
ATCGTCATCGACGCCACCACGCAGGGCCGGGTGGCCGACTGGATCTTCGCCGTCTCCATG
GGCCTCGCCACCGGCATCTTCATCTACGTCTCCATCAACCACCTCCTCTCCAAGGGCTAC
ACCCCGCTGAGGCCCGTCGCCGCCGACACGCCGGCGGGGAGGCTGCTCGCCGTCGTCCTC
GGCGTCGCCGTCATCGCCGTCGTCATGATCTGGGACACCTGATGCCGCTCATGATTTCGG
ACGTTTGTTGGTTCTTGCAGGAATGTGTGTGTGTAGTAAGTTCGTCGTGAAATTAGCATG
TGTAAAGTTTGTGCCACTCCAACCAAAGTTTCAGGATTATTTATAGCTTTGAATATATCA
TCAACGCTGGGGCACCATTGTTTTTGTTTCCATGGATTTTGGGGGTAAGAAATTGACCAA
AATTTAAGTTCG