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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0411600-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:16999055:17001060:1 gene:Os03g0411600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0411600-00)
Sequence

ATGAAGGCCCTCTCCGCCGCCGACAGCGCGGCATCCCCGGCGACAAAGATCACCATCCCG
TACTACTCCGCGGCGGCGGGGGCCGGCGAGGCGGGGCCGCCGTTCGGGAAGGGGCGGTAC
AAGGTGTGGGCCTTGGCGGCCATCGCGCTCCTCGCGCTCTGGTCCATGTCCGCCGCCTCC
GCCTCCCTCCGCTGGTCCTCCGGCCGCTTCCTCCTCGCCGCCACCGCCTCCGAGGACCTC
GACGCGCCCCTCCTCGACGACCTCGACTCGCTCGAAATGGAGGAGAGGGAAAAATTAGTG
GGTCGAATGTGGGACATGTACACACGCACCGGTGATGAGGTCCGACTTCCACGATTCTGG
CAGGAAGCCTTTGAGGCTGCCTACGAAGAGCTTGCTGGTGATGATATGCAGGTCCGTGAT
GCAGCCATCTCTGAGATAGCTCGAATGTCAGCCCACAGGCTTGAACTGGAGCAGCCAGTG
AATGAGGTATGA

Peptide Sequence

PEP ID

Os03t0411600-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:16999055:17001060:1 gene:Os03g0411600 transcript:Os03t0411600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0411600-00)
Sequence

MKALSAADSAASPATKITIPYYSAAAGAGEAGPPFGKGRYKVWALAAIALLALWSMSAAS
ASLRWSSGRFLLAATASEDLDAPLLDDLDSLEMEEREKLVGRMWDMYTRTGDEVRLPRFW
QEAFEAAYEELAGDDMQVRDAAISEIARMSAHRLELEQPVNEV

Transcript Sequence

Transcript ID

Os03t0411600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:16999055:17001060:1 gene:Os03g0411600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0411600-00)
Sequence

AGTGGCGTTGTATCGGAAGCGGGGCCCACACGGCCAACCTCACTACGCTACAAAAACCGG
AGGAAACCAAACGGAACGGAAAAAAAAAAACCAGCTCATCATCGCCGCGACGCCGCCGCC
ACCGCCACCGACGCCGCGGCCGCCGCCGGAATGAAGGCCCTCTCCGCCGCCGACAGCGCG
GCATCCCCGGCGACAAAGATCACCATCCCGTACTACTCCGCGGCGGCGGGGGCCGGCGAG
GCGGGGCCGCCGTTCGGGAAGGGGCGGTACAAGGTGTGGGCCTTGGCGGCCATCGCGCTC
CTCGCGCTCTGGTCCATGTCCGCCGCCTCCGCCTCCCTCCGCTGGTCCTCCGGCCGCTTC
CTCCTCGCCGCCACCGCCTCCGAGGACCTCGACGCGCCCCTCCTCGACGACCTCGACTCG
CTCGAAATGGAGGAGAGGGAAAAATTAGTGGGTCGAATGTGGGACATGTACACACGCACC
GGTGATGAGGTCCGACTTCCACGATTCTGGCAGGAAGCCTTTGAGGCTGCCTACGAAGAG
CTTGCTGGTGATGATATGCAGGTCCGTGATGCAGCCATCTCTGAGATAGCTCGAATGTCA
GCCCACAGGCTTGAACTGGAGCAGCCAGTGAATGAGGTATGA