Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0411500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:16994268:16997702:1 gene:Os03g0411500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIRESCENT-YELLOW LEAF description:Subunit of the chloroplast Clp (plastidic caseinolytic protease), Chloroplast biogenesis and leaf development (Os03t0411500-01)
Sequence	ATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTC TCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCA CCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAAT ACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCT GGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATAT ATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGAT GAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGCGGAAGTCTCTACTCCATCTTA GCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTTGGTGTT GTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGGAATGCGTTATGCCATG CCAAATGCTAGAGTAATGATTCATCAACCTCAAGGTGTATCAGAGGGTAATGTGGAGGAG GTGAGGCGACAGGTTGGGGAAACCATTTATGCTCGTGATAAAGTTGATAAGATGTTTGCT GCTTTTACTGGGCAAACCTTGGATATGGTACAACAGTGGACAGAGAGGGATCGTTTCATG TCTTCATCTGAAGCCATGGACTTTGGACTAGTTGATGCCCTGCTGGAAACAAGATACTAA

Peptide Sequence

PEP ID	Os03t0411500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:16994268:16997702:1 gene:Os03g0411500 transcript:Os03t0411500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIRESCENT-YELLOW LEAF description:Subunit of the chloroplast Clp (plastidic caseinolytic protease), Chloroplast biogenesis and leaf development (Os03t0411500-01)
Sequence	MAPMAISTPLALRASPTRLLSRRRSGAKSGVALPGPQFVPPGISSKLDERIHCHSSLRKN TIVASENENPPLMPAIMTPAGALDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLAAVD EEADILIYLNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILAGGEKGMRYAM PNARVMIHQPQGVSEGNVEEVRRQVGETIYARDKVDKMFAAFTGQTLDMVQQWTERDRFM SSSEAMDFGLVDALLETRY

Transcript Sequence

Transcript ID	Os03t0411500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:16994268:16997702:1 gene:Os03g0411500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIRESCENT-YELLOW LEAF description:Subunit of the chloroplast Clp (plastidic caseinolytic protease), Chloroplast biogenesis and leaf development (Os03t0411500-01)
Sequence	CTCCTCACTCCTCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCC AATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCT CTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACC ACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAA TACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGC TGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATA TATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGA TGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGCGGAAGTCTCTACTCCATCTT AGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTTGGTGT TGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGGAATGCGTTATGCCAT GCCAAATGCTAGAGTAATGATTCATCAACCTCAAGGTGTATCAGAGGGTAATGTGGAGGA GGTGAGGCGACAGGTTGGGGAAACCATTTATGCTCGTGATAAAGTTGATAAGATGTTTGC TGCTTTTACTGGGCAAACCTTGGATATGGTACAACAGTGGACAGAGAGGGATCGTTTCAT GTCTTCATCTGAAGCCATGGACTTTGGACTAGTTGATGCCCTGCTGGAAACAAGATACTA ACAAACAAACACTTAGGCACAGTTTGATTAGCAGAGGCTGGTACAAGGATTGTGAAACTG GAGCTGAAGTTGAGATTTTCGCCGTCCTTCTAGTTCAAGGACTCCAATGACAGGAGGCTG GATCTGCGAGACTTGAATGCATCGCCATCGCTCCTATGAGCAAAACATCTCTGCGTTGAG TGTGATTTTTTGCTCTTCTTTTTTGGATCTGGTTTTACATGCCGCCAGCCTATGGTCTCA ATGCATTGGTCCTGCTAATGTTTAGTGTAGACCAGATGATCCTTTAGACAGCAAAACATC AGTTATTACTCCGTAGATTTTCCCATGAGCTGATTCCAGACTGTGTGCAACTTTTGTGTT CCAATTGCAAAGTTTGCAACCCAACCCAACCCAACACATGGGCTGATGGGCTGTTGACAA AGGAGAGATTTTAC