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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0408300-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:16787183:16787911:1 gene:Os03g0408300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L27a-3. (Os03t0408300-00)
Sequence

ATGACAACGCGCTTCAAGAAGAACCGGAAGAAGCGCGGCCACGTGTCGGCCGGGCACGGG
CGCATCGGGAAGCACCGCAAGCACCCCGGAGGCCGCGGTAACGCCGGAGGGATGCACCAC
CACCGGATCCTGTTCGACAAGTACCACCCGGGCTACTTCGGCAAGGTCGGCATGCGCTAC
TTCCACAAGCTCAGCAACAGGTTCCACTGCCCCGCCGTCAACGTCGAGCGCCTCTGGTCC
ATGGTGCCCACCGACAAGGCCGCCGAGGCCGGCGCCGGCAAGGCCCCCGTCATCGACGTC
ACCCAGTTCGGCTACACCAAGGTGCTCGGCAAGGGGATGCTTCCCCCGCAGAGGCCCATC
GTCGTCAAGGCCAAGCTCATCTCCAAGGTCGCCGAGAAGAAGATCAAGGCCGCCGGCGGC
GCCGTCCTCCTCACCGCCTAG

Peptide Sequence

PEP ID

Os03t0408300-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:16787183:16787911:1 gene:Os03g0408300 transcript:Os03t0408300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L27a-3. (Os03t0408300-00)
Sequence

MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
FHKLSNRFHCPAVNVERLWSMVPTDKAAEAGAGKAPVIDVTQFGYTKVLGKGMLPPQRPI
VVKAKLISKVAEKKIKAAGGAVLLTA

Transcript Sequence

Transcript ID

Os03t0408300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:16787183:16787911:1 gene:Os03g0408300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L27a-3. (Os03t0408300-00)
Sequence

CCTCTTCCCTCCCACCCCGCCGGCCCCCGCCTCCGCCGCCGCGCCGCTCGCAACTCCGCC
GCTGCCATGACAACGCGCTTCAAGAAGAACCGGAAGAAGCGCGGCCACGTGTCGGCCGGG
CACGGGCGCATCGGGAAGCACCGCAAGCACCCCGGAGGCCGCGGTAACGCCGGAGGGATG
CACCACCACCGGATCCTGTTCGACAAGTACCACCCGGGCTACTTCGGCAAGGTCGGCATG
CGCTACTTCCACAAGCTCAGCAACAGGTTCCACTGCCCCGCCGTCAACGTCGAGCGCCTC
TGGTCCATGGTGCCCACCGACAAGGCCGCCGAGGCCGGCGCCGGCAAGGCCCCCGTCATC
GACGTCACCCAGTTCGGCTACACCAAGGTGCTCGGCAAGGGGATGCTTCCCCCGCAGAGG
CCCATCGTCGTCAAGGCCAAGCTCATCTCCAAGGTCGCCGAGAAGAAGATCAAGGCCGCC
GGCGGCGCCGTCCTCCTCACCGCCTAGGTACTACATACTTGGGAGTTGAGTTGGAGGGAG
GAGGGTTCTTGATATCTAAGGCGCTAGTTTCTTTATCCTTCAAAAGACTTTGATTTAGCT
CTTGTGCTTTTTCTGTTATGGATGTTACTACTGTATGGTATGGCTACTTGAATCTGTGGT
GGCAATTCAGGAGTTTTGAATTACATGATTATGCCGGTCTATATCAATATTTGCGTCTGC
CGCGTGCTA