Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0407900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:16749318:16754223:-1 gene:Os03g0407900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 110 description:Similar to Serine/threonine protein kinase-like. (Os03t0407900-01)
Sequence	ATGTATATATACCCCTCTCTCTCTCCCAACACTGACTCCACCTCACCACTCGATCGATCG CAAGAACACGATAAGGATTCAGGGATCGATCGATTCATCTCTCCTCGTCGTTGGTCACAG GACGGAGAGAGATCACCATCAGCAGCTAGCAGCAGGATGACGAGGAAGAAGGAGAGGTCA GGGTGGGGGAGCCTGTTCAGGGGATGCCTGAGCGGAGGAGGCGCGGCGGGGAGCCGGAAG GTGCGACCGGGGCCGAGGACGGCGGCGGCGGCGGCGGCGAAGCACGGCGGAGGAGCATCA TCGGCGGCGGCGCAGCGGCTGTCGTTCACGGACGTGATGAGCACGGCGTCGGAGCAGGAG CTGTCGGTGTCGCTGGTGGGGTCGAACCTGCACGTGTTCACGGTGGGGGAGCTGAAGGCG GCGACGCAGGGGTTCCTCGACGGCAACTTCCTCGGCGAGGGCGGCTTCGGCCCCGTCTAC AAGGGCAACGTCGCCGACAAGGCCAAGCCGGGCCTCAAGGCCCAGCCCATCGCCGTCAAG CTCTGGGACCCCGAGGGCGCCCAGGGTCACAAAGAATGGCTGTCGGAGGTGATCTTCCTT GGGCAGCTCAGGCACCCCAACCTGGTGAAGCTCATCGGCTACTGCTGCGAGGACGAGCAC CGCCTGCTCGTCTACGAGTACATGGCCAAGGGCAGCCTCGAGAACCACCTCTTCAAGAAG TTTCCTTCGATGCTGTCGTGGTCAACCCGGTTGAACATCGCGGTTGGCGCCGCCAAGGGC CTCGTCTTCCTTCACGACGCCGAGAAGCCCGTCATCTACCGCGACTTCAAGACCTCCAAC ATCCTACTCGACCCGGAGTACAAGGCGAAGCTGTCGGACTTTGGGCTGGCCAAAGATGGG CCGGAGGGCGACGACACCCACGTCTCCACACGCGTCATGGGCACCCACGGCTACGCCGCA CCGGAGTACATCCTCACCGGTCACCTTACAGCAAAGAGCGACGTATACAGCTTTGGTGTC GTTCTGCTAGAGATCCTATCCGGGCGACGGGCTGTGGACAAGACACGACCTAGCAGGGAG CAGCATCTAGTCGAACACATGCGCTCCTGGCTCAAGGATCCACAGAAGTTAAGCCGAGTC ATGGACCCGGCCCTGGAGGGCCAGTACTTCGCTACCGCGGCTCATAAGGCGGCCCTGGTG GCGTATAAGTGCCTGAGCGGTAACCCCAAAAATAGACCGGACATGTGTCAAGTCGTGAAA GACCTAGAGCCCCTCCTCAATGTCACCGATGATGTCTCTGATGAGTCGGTGGCACCCATA GCCCCGGTAAGGGAGGATAATGCTGTGAGAAAGGAAAGAACAGCAAGGAGAAGGCCCGGT GAGAGGGATGGTGGAAAACTTAGGCAAAGTAAAATGCGTTCACCCCAGAAGGTCGTTAGG AGACGTCCAGGCCAAAGCGAGGAGTTTTGGGTGTGGCATATGCCTGGAGAAGTAAAATGC TAA

Peptide Sequence

PEP ID	Os03t0407900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:16749318:16754223:-1 gene:Os03g0407900 transcript:Os03t0407900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 110 description:Similar to Serine/threonine protein kinase-like. (Os03t0407900-01)
Sequence	MYIYPSLSPNTDSTSPLDRSQEHDKDSGIDRFISPRRWSQDGERSPSAASSRMTRKKERS GWGSLFRGCLSGGGAAGSRKVRPGPRTAAAAAAKHGGGASSAAAQRLSFTDVMSTASEQE LSVSLVGSNLHVFTVGELKAATQGFLDGNFLGEGGFGPVYKGNVADKAKPGLKAQPIAVK LWDPEGAQGHKEWLSEVIFLGQLRHPNLVKLIGYCCEDEHRLLVYEYMAKGSLENHLFKK FPSMLSWSTRLNIAVGAAKGLVFLHDAEKPVIYRDFKTSNILLDPEYKAKLSDFGLAKDG PEGDDTHVSTRVMGTHGYAAPEYILTGHLTAKSDVYSFGVVLLEILSGRRAVDKTRPSRE QHLVEHMRSWLKDPQKLSRVMDPALEGQYFATAAHKAALVAYKCLSGNPKNRPDMCQVVK DLEPLLNVTDDVSDESVAPIAPVREDNAVRKERTARRRPGERDGGKLRQSKMRSPQKVVR RRPGQSEEFWVWHMPGEVKC

Transcript Sequence

Transcript ID	Os03t0407900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:16749318:16754223:-1 gene:Os03g0407900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 110 description:Similar to Serine/threonine protein kinase-like. (Os03t0407900-01)
Sequence	GCGGGCGAGAAGAGAGGAGACGTCACGGACGGAAGAGTCGAGTAGTAGTAGGAGGAGGAG GAAGAAGAAGAAGAAGAAGAAGATGTCCATGTCCTTACTATCGGTTGGTAGGTAAGCCGA GGCACACGCGGTCATCTCTCCACACACGCGCCCCCTCGCTTCCCCCACATGTATATATAC CCCTCTCTCTCTCCCAACACTGACTCCACCTCACCACTCGATCGATCGCAAGAACACGAT AAGGATTCAGGGATCGATCGATTCATCTCTCCTCGTCGTTGGTCACAGGACGGAGAGAGA TCACCATCAGCAGCTAGCAGCAGGATGACGAGGAAGAAGGAGAGGTCAGGGTGGGGGAGC CTGTTCAGGGGATGCCTGAGCGGAGGAGGCGCGGCGGGGAGCCGGAAGGTGCGACCGGGG CCGAGGACGGCGGCGGCGGCGGCGGCGAAGCACGGCGGAGGAGCATCATCGGCGGCGGCG CAGCGGCTGTCGTTCACGGACGTGATGAGCACGGCGTCGGAGCAGGAGCTGTCGGTGTCG CTGGTGGGGTCGAACCTGCACGTGTTCACGGTGGGGGAGCTGAAGGCGGCGACGCAGGGG TTCCTCGACGGCAACTTCCTCGGCGAGGGCGGCTTCGGCCCCGTCTACAAGGGCAACGTC GCCGACAAGGCCAAGCCGGGCCTCAAGGCCCAGCCCATCGCCGTCAAGCTCTGGGACCCC GAGGGCGCCCAGGGTCACAAAGAATGGCTGTCGGAGGTGATCTTCCTTGGGCAGCTCAGG CACCCCAACCTGGTGAAGCTCATCGGCTACTGCTGCGAGGACGAGCACCGCCTGCTCGTC TACGAGTACATGGCCAAGGGCAGCCTCGAGAACCACCTCTTCAAGAAGTTTCCTTCGATG CTGTCGTGGTCAACCCGGTTGAACATCGCGGTTGGCGCCGCCAAGGGCCTCGTCTTCCTT CACGACGCCGAGAAGCCCGTCATCTACCGCGACTTCAAGACCTCCAACATCCTACTCGAC CCGGAGTACAAGGCGAAGCTGTCGGACTTTGGGCTGGCCAAAGATGGGCCGGAGGGCGAC GACACCCACGTCTCCACACGCGTCATGGGCACCCACGGCTACGCCGCACCGGAGTACATC CTCACCGGTCACCTTACAGCAAAGAGCGACGTATACAGCTTTGGTGTCGTTCTGCTAGAG ATCCTATCCGGGCGACGGGCTGTGGACAAGACACGACCTAGCAGGGAGCAGCATCTAGTC GAACACATGCGCTCCTGGCTCAAGGATCCACAGAAGTTAAGCCGAGTCATGGACCCGGCC CTGGAGGGCCAGTACTTCGCTACCGCGGCTCATAAGGCGGCCCTGGTGGCGTATAAGTGC CTGAGCGGTAACCCCAAAAATAGACCGGACATGTGTCAAGTCGTGAAAGACCTAGAGCCC CTCCTCAATGTCACCGATGATGTCTCTGATGAGTCGGTGGCACCCATAGCCCCGGTAAGG GAGGATAATGCTGTGAGAAAGGAAAGAACAGCAAGGAGAAGGCCCGGTGAGAGGGATGGT GGAAAACTTAGGCAAAGTAAAATGCGTTCACCCCAGAAGGTCGTTAGGAGACGTCCAGGC CAAAGCGAGGAGTTTTGGGTGTGGCATATGCCTGGAGAAGTAAAATGCTAAATATCAAGT GTAATATATATATATCCGTAACCCGCAATGTAATGTTTTTGTGTAGTGACTGATGATGAG GATGTAAAATGTAGATGGTGGTGCAGCCGGTGGTCACTGGCCAGGAAGGATTGCACCCCC TGTAATTCCTTGTTTCTTTTCTCTTGGTTTGAAATTTATTGGTCTTGGCCTCTTTGTAC