Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0407100-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:16715256:16715939:1 gene:Os03g0407100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1677, plant family protein. (Os03t0407100-00)
Sequence	ATGGAGGAGGTGGGGGAAGTGGAGGAGGAGGAGGAGGCGGCGGCGGCGGCGGTGGTGGTG GCGGCGGCGTGCGAGTGCTGCGGGTTCACGCAGGAGTGCACGGCGCCGTACATGGCGGCG GTGCGGGCGCGGTACGGCGGGAGGTGGATCTGCGGGCTGTGCGGGGACGCCGCCGGCGAG GAGCTGGGGCGCGCCGACCCGCCCATCTCGCCCGGCGAGGCGCTCGACCGCCACGCCGCC GTCTGCCGCGCCCGCCGTGCCTCCGTGCCGCCGTCGCCCGAGGAGAATGCCGGGGACCTC ATCGCCGCCGTACGCGTGCTCCTCCTCCGCCGCCTCGGCTCGGGCGGCGCCTCCTCGCCG CCGCCGCCGCCGAGGAGGGTAGTCCGCTCCACGCCGAGCAGCCCCAGGCGCGGCGTGGGC GGCGCCGCCGACGCGTCCGACGCCGTCGTCGTCGCCGCCGCCAGCGTCGCGCTCGCGCGC ACGGGAAGCTGCTTCGCGGCGCTCCTGGAGTGA

Peptide Sequence

PEP ID	Os03t0407100-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:16715256:16715939:1 gene:Os03g0407100 transcript:Os03t0407100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1677, plant family protein. (Os03t0407100-00)
Sequence	MEEVGEVEEEEEAAAAAVVVAAACECCGFTQECTAPYMAAVRARYGGRWICGLCGDAAGE ELGRADPPISPGEALDRHAAVCRARRASVPPSPEENAGDLIAAVRVLLLRRLGSGGASSP PPPPRRVVRSTPSSPRRGVGGAADASDAVVVAAASVALARTGSCFAALLE

Transcript Sequence

Transcript ID	Os03t0407100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:16715256:16715939:1 gene:Os03g0407100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1677, plant family protein. (Os03t0407100-00)
Sequence	ATGGAAGCGGGGCACCACGGCGGTGACCCCTCGCCGGCGCCGGCGCCGGCCACCGGCGGC GACGAGGAGCGCCTTCGCACTGTACGGATCCTGTGACCTTCGTCTCCGGATTCTGCTCGA GAGCGCGCTCGCGTCTAGCTTGAGGGTATACATAGAAGGTCGTCGTTTCGGATGGAGGAG GTGGGGGAAGTGGAGGAGGAGGAGGAGGCGGCGGCGGCGGCGGTGGTGGTGGCGGCGGCG TGCGAGTGCTGCGGGTTCACGCAGGAGTGCACGGCGCCGTACATGGCGGCGGTGCGGGCG CGGTACGGCGGGAGGTGGATCTGCGGGCTGTGCGGGGACGCCGCCGGCGAGGAGCTGGGG CGCGCCGACCCGCCCATCTCGCCCGGCGAGGCGCTCGACCGCCACGCCGCCGTCTGCCGC GCCCGCCGTGCCTCCGTGCCGCCGTCGCCCGAGGAGAATGCCGGGGACCTCATCGCCGCC GTACGCGTGCTCCTCCTCCGCCGCCTCGGCTCGGGCGGCGCCTCCTCGCCGCCGCCGCCG CCGAGGAGGGTAGTCCGCTCCACGCCGAGCAGCCCCAGGCGCGGCGTGGGCGGCGCCGCC GACGCGTCCGACGCCGTCGTCGTCGCCGCCGCCAGCGTCGCGCTCGCGCGCACGGGAAGC TGCTTCGCGGCGCTCCTGGAGTGA