Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0406200-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:16654366:16658086:1 gene:Os03g0406200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC ELONGATION FACTOR 1-BETA2 description:Elongation factor 1 beta 2. (Os03t0406200-01);Elongation factor 1 beta 2. (Os03t0406200-02)
Sequence

ATGGCGATTACTTTGTCCAATGTCAACTCTGAGGCAGGCCTCCAGAAGCTTGATGAGTAC
CTCCTTACTCGCAGCTACATCAGTGGGTACCAGGCTTCAAAGGATGACATGACTGTTTTC
ACCTCACTTCCTTCTGCTCCCGCAGCAAGCTATGTCAATGTCACAAGGTGGTATGATCAC
ATCAGTGCTCTCCTAAGATCCAGTGGAGTTACCGCAGAGGGTGAAGGTGTGAAGGTTGAG
TCAACTGCTTGTTCTGTGTCTCCAACTGCTGACCAAAAGGCACCAGCAGCTGATGAAGAA
GATGATGACGATGTTGATCTGTTTGGTGAGGAGACTGAAGAGGAGAAGAAAGCAGCAGAA
GAACGGGCCGCAGCTGTCAAGGCTTCTGGAAAGAAGAAAGAATCTGGGAAATCATCGGTT
CTGCTAGATGTAAAGCCATGGGATGACGAAACAGACATGGCAAAGCTTGAGGAAGCTGTG
AGGAATGTGAAGATGGAGGGCCTGCTCTGGGGTGCATCCAAACTTGTACCAGTTGGATAT
GGCATCAAGAAGTTGCAAATTATGATGACCATTGTGGACGATCTTGTTTCTGTGGACAGT
CTCATTGAGGATTATTTTTACACGGAACCAGCTAATGAGTTTATTCAGAGTTGTGACATT
GTTGCTTTCAACAAAATCTAA

Peptide Sequence

PEP ID

Os03t0406200-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:16654366:16658086:1 gene:Os03g0406200 transcript:Os03t0406200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC ELONGATION FACTOR 1-BETA2 description:Elongation factor 1 beta 2. (Os03t0406200-01);Elongation factor 1 beta 2. (Os03t0406200-02)
Sequence

MAITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDH
ISALLRSSGVTAEGEGVKVESTACSVSPTADQKAPAADEEDDDDVDLFGEETEEEKKAAE
ERAAAVKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGY
GIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAFNKI

Transcript Sequence

Transcript ID

Os03t0406200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:16654366:16658086:1 gene:Os03g0406200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC ELONGATION FACTOR 1-BETA2 description:Elongation factor 1 beta 2. (Os03t0406200-01);Elongation factor 1 beta 2. (Os03t0406200-02)
Sequence

CTCGCGACTTTGCCCGCCGCCGCCGCCGCCGCTCTCCATCCCGCGAGAAGCTCGTCGCCG
GCGTCCCGCTGCATCCATCCTCTCCGGCGATGGCGATTACTTTGTCCAATGTCAACTCTG
AGGCAGGCCTCCAGAAGCTTGATGAGTACCTCCTTACTCGCAGCTACATCAGTGGGTACC
AGGCTTCAAAGGATGACATGACTGTTTTCACCTCACTTCCTTCTGCTCCCGCAGCAAGCT
ATGTCAATGTCACAAGGTGGTATGATCACATCAGTGCTCTCCTAAGATCCAGTGGAGTTA
CCGCAGAGGGTGAAGGTGTGAAGGTTGAGTCAACTGCTTGTTCTGTGTCTCCAACTGCTG
ACCAAAAGGCACCAGCAGCTGATGAAGAAGATGATGACGATGTTGATCTGTTTGGTGAGG
AGACTGAAGAGGAGAAGAAAGCAGCAGAAGAACGGGCCGCAGCTGTCAAGGCTTCTGGAA
AGAAGAAAGAATCTGGGAAATCATCGGTTCTGCTAGATGTAAAGCCATGGGATGACGAAA
CAGACATGGCAAAGCTTGAGGAAGCTGTGAGGAATGTGAAGATGGAGGGCCTGCTCTGGG
GTGCATCCAAACTTGTACCAGTTGGATATGGCATCAAGAAGTTGCAAATTATGATGACCA
TTGTGGACGATCTTGTTTCTGTGGACAGTCTCATTGAGGATTATTTTTACACGGAACCAG
CTAATGAGTTTATTCAGAGTTGTGACATTGTTGCTTTCAACAAAATCTAAAATGGAGTCT
TGTCAGAGGCAGCCTTACTAAAAGAGGAATGCTATATGCTCATCATCAGAATTTCCCAAT
GGTTTATGTTTCGTCTATGGACCTTGAGTGTACTGCGAACCAGCGTTTGGTATTATCATG
AGATTTAAATCTTGGTTGGACTTGTTTTGGCC