Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0406100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:16645244:16646434:1 gene:Os03g0406100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPX (SYG/PHO81/XPR1) domain gene 5 description:SPX domain-containing protein, Negative regulation of phosphate signaling, Pi homeostasis (Os03t0406100-01)
Sequence	ATGAAGTTCGGGAAGCGGCTGAAGAGGCAGATCGAGGAGAGCCTGCCGGAGTGGCGCGAC CATTTCCTCAACTACAAGGAGCTCAAGCGCCGCCTCAACGCCGTCTCCTCCCCCGACCCC GCCGCCGAGGCCCGCTTCCTCGCCCTCCTCCACGCCGAGGTCGACAAGTTCAACGCCTTC TTCCTCGAGCAGGAGGAGGACTTCGTCATCAGGCAGCGGGAGCTGCAGGAGAGGATCCAG TCGTCGTCGTCGGCGGCGGCGGAGATGGAGGGGCGGGTGCGGAGGGAGGTGGTGGACCTG CACGGGGAGATGGTGCTGCTGCTCAACTACAGCAGCATCAACTACACGGGGCTCGCCAAG ATCCTCAAGAAGTACGACAAGCGCACCGGCGGCGTGCTCCGCCTCCCCGTCATCGCCGGC GTCCTCCGCCAGCCCTTCTACGCCACCGACCTCCTCTCCAGCCTCGTCAGGGACTGCGAG GCCATCATGGACGCCGTCTTCCCCTCCCTCCCCTCCCCCTCCGCCGCCGCCGCCGCCGCC GCCCGCGCCGCCGCCGAGCAGGCCATCTTCCGCAACACCGTCGCCGCCCTGCTCACCATG CAGGAGGTCCGCAGCGGCAGCTCCACCTACGGCCACTTCTCCCTCCCGCCGATGACCCCG CTGCCCGACTCCGACTGGCTCATCCAGTCCGTCCAGCCGCCGCCGCCGCCGCCGCCGTCG TCGCCGCTCATCATCCCCACGTAG

Peptide Sequence

PEP ID	Os03t0406100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:16645244:16646434:1 gene:Os03g0406100 transcript:Os03t0406100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPX (SYG/PHO81/XPR1) domain gene 5 description:SPX domain-containing protein, Negative regulation of phosphate signaling, Pi homeostasis (Os03t0406100-01)
Sequence	MKFGKRLKRQIEESLPEWRDHFLNYKELKRRLNAVSSPDPAAEARFLALLHAEVDKFNAF FLEQEEDFVIRQRELQERIQSSSSAAAEMEGRVRREVVDLHGEMVLLLNYSSINYTGLAK ILKKYDKRTGGVLRLPVIAGVLRQPFYATDLLSSLVRDCEAIMDAVFPSLPSPSAAAAAA ARAAAEQAIFRNTVAALLTMQEVRSGSSTYGHFSLPPMTPLPDSDWLIQSVQPPPPPPPS SPLIIPT

Transcript Sequence

Transcript ID	Os03t0406100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:16645244:16646434:1 gene:Os03g0406100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPX (SYG/PHO81/XPR1) domain gene 5 description:SPX domain-containing protein, Negative regulation of phosphate signaling, Pi homeostasis (Os03t0406100-01)
Sequence	AGATTGGATATTACAGCAGCCCAACTCCGACCAACTTAATTTCCACCGGCCGTCGAGGAG GAGGAGGCGGCCATGAAGTTCGGGAAGCGGCTGAAGAGGCAGATCGAGGAGAGCCTGCCG GAGTGGCGCGACCATTTCCTCAACTACAAGGAGCTCAAGCGCCGCCTCAACGCCGTCTCC TCCCCCGACCCCGCCGCCGAGGCCCGCTTCCTCGCCCTCCTCCACGCCGAGGTCGACAAG TTCAACGCCTTCTTCCTCGAGCAGGAGGAGGACTTCGTCATCAGGCAGCGGGAGCTGCAG GAGAGGATCCAGTCGTCGTCGTCGGCGGCGGCGGAGATGGAGGGGCGGGTGCGGAGGGAG GTGGTGGACCTGCACGGGGAGATGGTGCTGCTGCTCAACTACAGCAGCATCAACTACACG GGGCTCGCCAAGATCCTCAAGAAGTACGACAAGCGCACCGGCGGCGTGCTCCGCCTCCCC GTCATCGCCGGCGTCCTCCGCCAGCCCTTCTACGCCACCGACCTCCTCTCCAGCCTCGTC AGGGACTGCGAGGCCATCATGGACGCCGTCTTCCCCTCCCTCCCCTCCCCCTCCGCCGCC GCCGCCGCCGCCGCCCGCGCCGCCGCCGAGCAGGCCATCTTCCGCAACACCGTCGCCGCC CTGCTCACCATGCAGGAGGTCCGCAGCGGCAGCTCCACCTACGGCCACTTCTCCCTCCCG CCGATGACCCCGCTGCCCGACTCCGACTGGCTCATCCAGTCCGTCCAGCCGCCGCCGCCG CCGCCGCCGTCGTCGCCGCTCATCATCCCCACGTAGTCATCTCACGGCAAATGCCACATA TTGCGACGAGCTGCAACATTGTCAAATTTTTTTTCTTCTTTTGGCAGCAAATTGAAATCG AAATCGAAAAGAACAGACATGTAATTACAAATCTGTAATGTTGTCTTTCTCTTTTTGTTT TTTTGGTGTGTGTTTTTATCATAGTTTCTCTAACTAATAGGAGTAGTAAATAATGTAACG AATGAGATCAATACCAATGGTTCTTGATGGCCATAACTAAGAAATACTAGTATTAGTACT AGATTGCACATCACAGGTGCTC