Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0405500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:16590192:16595911:1 gene:Os03g0405500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PDI-like protein. (Os03t0405500-01);Hypothetical conserved gene. (Os03t0405500-02)
Sequence	ATGGCGGACGCCGCTGGCATCGCCACCGTCCTCGCCGCCGACGGCAGGGACTTCCTCCTC CGCAACTCCGCCGACCAGGTGAAGATCAGCAGCATCGAGGCAAGCACCGTTGCCCTCTAC TTCTCGGCCTCATGGTGCCCACCATGCAGGCGCTTCACGCCTAAGCTTATTGAAGCATAC AATGAGCTGGTCTCCCAGGGAAAGAACTTCGAGGTTGTCTTTGTTTCAGGGGATAAGGAT CAAGAGGCATTCGATGCATACTTTGCAAAGATGCCATGGTTGGCAGTCCCTTTCTCGGAC TCCGAATGCCGTGCCAAACTCAATAAGCGCTTTAAGGTGAGAGGCATTCCACACCTCGTC ATCCTTAATGCAACATCTGGTGAAGTTTATACGGAAGATGGAGTTGAGCTTGTGACTGTG CATGGTACAGAAGCTTACCCTTTTACAACAGAGAGGATCAATGAATTGAAGGAACAGGAA AAGGCAGCTAAGGATAATCAAACTGTTCAAAGTGTGCTTGGTACACCCACCCGCGACTAC TTACTTTCGAACAAGGGAGATAGGGTACCCATCTCTGACCTTGAGGGCAAGTACGTTGGT TTGTGCTTTGTGGTGAATGGCTATGGCCCAGTAGTCCAATTTACCTCATTGCTTGCTAAA TTTTATGAGAAACTCAAAGAAGTAGGGGAGAAATTTGAAGTTGTAGCTGTATCCTTGGAC AGTGATGAGGAATTATCCAATGAGAGTTTTGCAGGCATGCCTTGGCTTGCCATCCCTCAG GAAGACAAGATGGGTGAGAAGCTGGCTCGTTATTTTGAGCTTAGAGGCCTGCCTACACTT GTCCTGATTGGTCCTGATGGGAAGACACTGAACAACAATGTTGCTGACATAATTGATGAG CATGGTCAAGATGCATGGGAAGGGTTTCCTTTCACTGCAGAGAAGATGGAAATTCTTGCT GAGAAGGCAAAGGCTAAAGCAGAGTTACAGACCTTGGAGTCCCTTCTGGTCATTGGTGAT TTGGACTTTGTGCTTGGAAAAGATGGAGCAAAGGTTCCTGTATCAGAACTTGTTGGGAAG ACTGTCCTCCTCTACTTCTCAGCTAAATGGTGCGGACCATGCCGAGCCTTCCTGCCTAAA CTTGTCGACGAGTACAACAAGATCAAGGAGAAGCACAACGACTTCGAGATCATCTTCATC TCCAGCGATCGAGACCAGAGCTCCTACGACGAGTTCTTCTCCGGCATGCCATGGCTCGCT CTTCCCCTGGGTGACGAGAGGAAGCAGCACCTGAGCAAGACCTTCAGAGTCCGCGGGATC CCTTCGCTCGTCGCCATCGGCGCCGACGGGAGGACGGTGGCCAGGGACGCCAAGACCCCG CTGACGGCCCACGGCGCCGACGCGTTCCCGTTCACGGAGGAGAGGCTCCTGGAGATGGAG AGGAAGATCGACGAGATGGCGAAGGGGTGGCCCGGGAAGCTGAAGCACGAGCTGCACGAT GAGCATGAGCTCGTGCTGACTCGCTGCACCACGTATGGCTGTGATGGATGCGACGAGATG GGCAGCTCGTGGTCGTACAGGTGCAGGGAGTGTGACTTCGACCTGCACCCCAAGTGCGCG CTGGGGAAGGAGGAGGAGAAGAAGGGCGATGACGAGGCTGAGGCTGAGGCTGACCCAGCA TGCGAGGGAGGCGTTTGCAGGAAGGCCTAA

Peptide Sequence

PEP ID	Os03t0405500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:16590192:16595911:1 gene:Os03g0405500 transcript:Os03t0405500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PDI-like protein. (Os03t0405500-01);Hypothetical conserved gene. (Os03t0405500-02)
Sequence	MADAAGIATVLAADGRDFLLRNSADQVKISSIEASTVALYFSASWCPPCRRFTPKLIEAY NELVSQGKNFEVVFVSGDKDQEAFDAYFAKMPWLAVPFSDSECRAKLNKRFKVRGIPHLV ILNATSGEVYTEDGVELVTVHGTEAYPFTTERINELKEQEKAAKDNQTVQSVLGTPTRDY LLSNKGDRVPISDLEGKYVGLCFVVNGYGPVVQFTSLLAKFYEKLKEVGEKFEVVAVSLD SDEELSNESFAGMPWLAIPQEDKMGEKLARYFELRGLPTLVLIGPDGKTLNNNVADIIDE HGQDAWEGFPFTAEKMEILAEKAKAKAELQTLESLLVIGDLDFVLGKDGAKVPVSELVGK TVLLYFSAKWCGPCRAFLPKLVDEYNKIKEKHNDFEIIFISSDRDQSSYDEFFSGMPWLA LPLGDERKQHLSKTFRVRGIPSLVAIGADGRTVARDAKTPLTAHGADAFPFTEERLLEME RKIDEMAKGWPGKLKHELHDEHELVLTRCTTYGCDGCDEMGSSWSYRCRECDFDLHPKCA LGKEEEKKGDDEAEAEADPACEGGVCRKA

Transcript Sequence

Transcript ID	Os03t0405500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:16590192:16595911:1 gene:Os03g0405500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PDI-like protein. (Os03t0405500-01);Hypothetical conserved gene. (Os03t0405500-02)
Sequence	ACTCCACTCCACCAGACCGGCCACCACTTGCCCACTCCCTCGCTACTACTAGTACTAGTC CTACACTATACGCTCCCGGATGGCGGACGCCGCTGGCATCGCCACCGTCCTCGCCGCCGA CGGCAGGGACTTCCTCCTCCGCAACTCCGCCGACCAGGTGAAGATCAGCAGCATCGAGGC AAGCACCGTTGCCCTCTACTTCTCGGCCTCATGGTGCCCACCATGCAGGCGCTTCACGCC TAAGCTTATTGAAGCATACAATGAGCTGGTCTCCCAGGGAAAGAACTTCGAGGTTGTCTT TGTTTCAGGGGATAAGGATCAAGAGGCATTCGATGCATACTTTGCAAAGATGCCATGGTT GGCAGTCCCTTTCTCGGACTCCGAATGCCGTGCCAAACTCAATAAGCGCTTTAAGGTGAG AGGCATTCCACACCTCGTCATCCTTAATGCAACATCTGGTGAAGTTTATACGGAAGATGG AGTTGAGCTTGTGACTGTGCATGGTACAGAAGCTTACCCTTTTACAACAGAGAGGATCAA TGAATTGAAGGAACAGGAAAAGGCAGCTAAGGATAATCAAACTGTTCAAAGTGTGCTTGG TACACCCACCCGCGACTACTTACTTTCGAACAAGGGAGATAGGGTACCCATCTCTGACCT TGAGGGCAAGTACGTTGGTTTGTGCTTTGTGGTGAATGGCTATGGCCCAGTAGTCCAATT TACCTCATTGCTTGCTAAATTTTATGAGAAACTCAAAGAAGTAGGGGAGAAATTTGAAGT TGTAGCTGTATCCTTGGACAGTGATGAGGAATTATCCAATGAGAGTTTTGCAGGCATGCC TTGGCTTGCCATCCCTCAGGAAGACAAGATGGGTGAGAAGCTGGCTCGTTATTTTGAGCT TAGAGGCCTGCCTACACTTGTCCTGATTGGTCCTGATGGGAAGACACTGAACAACAATGT TGCTGACATAATTGATGAGCATGGTCAAGATGCATGGGAAGGGTTTCCTTTCACTGCAGA GAAGATGGAAATTCTTGCTGAGAAGGCAAAGGCTAAAGCAGAGTTACAGACCTTGGAGTC CCTTCTGGTCATTGGTGATTTGGACTTTGTGCTTGGAAAAGATGGAGCAAAGGTTCCTGT ATCAGAACTTGTTGGGAAGACTGTCCTCCTCTACTTCTCAGCTAAATGGTGCGGACCATG CCGAGCCTTCCTGCCTAAACTTGTCGACGAGTACAACAAGATCAAGGAGAAGCACAACGA CTTCGAGATCATCTTCATCTCCAGCGATCGAGACCAGAGCTCCTACGACGAGTTCTTCTC CGGCATGCCATGGCTCGCTCTTCCCCTGGGTGACGAGAGGAAGCAGCACCTGAGCAAGAC CTTCAGAGTCCGCGGGATCCCTTCGCTCGTCGCCATCGGCGCCGACGGGAGGACGGTGGC CAGGGACGCCAAGACCCCGCTGACGGCCCACGGCGCCGACGCGTTCCCGTTCACGGAGGA GAGGCTCCTGGAGATGGAGAGGAAGATCGACGAGATGGCGAAGGGGTGGCCCGGGAAGCT GAAGCACGAGCTGCACGATGAGCATGAGCTCGTGCTGACTCGCTGCACCACGTATGGCTG TGATGGATGCGACGAGATGGGCAGCTCGTGGTCGTACAGGTGCAGGGAGTGTGACTTCGA CCTGCACCCCAAGTGCGCGCTGGGGAAGGAGGAGGAGAAGAAGGGCGATGACGAGGCTGA GGCTGAGGCTGACCCAGCATGCGAGGGAGGCGTTTGCAGGAAGGCCTAAAAGAGACTTGT TCTTCCACTGGTTATCTACTGCTGATTTAAGCGTGCCTGGATGTTTGGATGTGAAATTAG AGAATTATGTAGTGAGTAATAAATATGGTTTTGTTTACAAAGTAGTGGTATTGGGGTTGC TGGTACATTGGTATTTGTGTTGATGAACATTAGTTGAGACCAGAGCTTTGGATTATTCAT TATTATGTGCAAACCAAAACCATATGTAAGTATGAGTCCGGATTGGTAATTGGGTATCTT GAATCATGTTGTGAGT