Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0403100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:16421056:16439493:1 gene:Os03g0403100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-directed RNA polymerase subunit. (Os03t0403100-01)
Sequence	ATGGAACGCACTGAGGAGGAGGAGGCGCCCGCCGCCAAGGACCCCAACGCGTCGCTGCCG TCGCCGACGTACAGGTCGCTCGCCGCGCCCGTCACCAAGCCCGTCGACAAGTTCGCGCTC CTTCCTGCCTTCCTCAAGGTTAGAGGCCTCGTTAAGGAGCACATCGACTCCTTCAACTAC TTCATCACCAAGGGAATTAGGAACATTGTCAAGGCAAACAATCGCATCGAAGCGCGCAAC AACCCCTCTATTTTTCTTAGGTACAATAGTGTAAGGGTTGGTGTGCCCTCCGTACAAGTA CAATACATCGCTGAAAAAATCACGCCACACTTTTGCCGCCTTACCGATCGCACATACTCT GCTCCTGTGTTGGCTGATATTGAATACACAGTTGGAAAGCAGTATGAGCTGAAAAGGAAG CCTAATTTCATCATTGGGTACTTGCCAATTATGCTTAGAAGTCATGCATGCGTTCTGAAT GGAAAGGATGAAGCTGAATTAGCAAGATATGGTGAGTGCCCTCTTGATCCTGGTGGTTAC TTCATTGTTAAGGGAACCGAGAAGGTCATTCTTATACAAGAACAGCTATCAAAGAATCGT ATTATTATCGACACCGATAGTAAAGGAAGGGTGATTGCATCTGTTACGAGCAGCACACAT GAAATAAAAAGCAAAACTGTGATTTTTATGGAGAAGGAGAAAATTTATCTACAGTTGAAT CAATTCACTAAGCCGATACCTATAATTGTGGTTATGAAAGCGATGGGGATGGAAAGTGAC CAAGAGGTTGCACAAATGGTCGGAAGAGATCCAAGATATGGAGATCTCCTATATCCATCT ATTCAGGAATGTGCCTTTGAGAGAATCTATACACAGAAGCAAGCTCTGCAGTACATGGAT GACAAGGTGATGTATCCTGGTGCAGGAAATCAGAAGGAAGGTCGTTCAAAATCAATCCTC CGTGATGTTTTTGTTGCACATGTTCCGGTTGAAAGCGGGAATTTCCGACCAAAGTGCATA TACACAGCTGTTATGTTAAGGCGCATGATGGATGCAATCTTGAATGCCGACACTTTTGAT GATAAGGATTATGTAGGAAATAAGAGGCTAGAGCTGTCTGGTCAACTAATATCCCTGCTT TTTGAGGATTTGTTCAAAACGATGAACTCCAATGCTGTGGAGCTTATGAACAAAACAAGT GAAAAGATCCATTCTAGCCCATTGGATTTAAGCCTGCATATAAAGGAAAATATCATAACC CATGGTTTGGAGAGGGCTATTTCCACAGGAAATTGGGATATTAAACGATTTAGGATGCAT AGAAAAGGTGTATCACAGGTTCTTTCAAGATTATCCTACATGGCATCTTTAGGCTATATG ACAAGGATAACACCACAATTTGAGAAGACCCGGAAAACAAGTGGACCTCGTGCTTTGCAG CCTAGTCAGTGGGGTATGCTTTGTCCATGTGATACTCCTGAAGGGGAGGCTTGTGGCTTG ACAAAAAATTTAGCTTTGTTGACCCACGTTACAACAGATCAAGAGGAAGGCCCACTCATG AATCTCTGTTATAGTCTAGGTGTGGAAGATTTATCACTTCTGTCTGGAGAAGAAATCCAT GCATCGGGTTCGTTTTTGGTCATGTTCAATGGGTTAATACTGGGGAAACACAGACAACCT CAGAGATTTGCTAATGCTATGAGAAAATTGCGTCGTTCGGGTATAATTGGAGAGTTCGTA AGCATTTTTGTAAACGAGAAGCAGCATTGCATTCACATTGCCTCTGATGGCGGTCGTGTC TGTCGCCCACTTATAATTGCTGATAAGGGGATACCAAGAGTCAAAGAGCATCATATGAAA CAATTGAGAGATGGTATTCGTTCGTTTGATGATTTTCTGCGTGATGGGTTGATCGAATAT CTTGACGTTAATGAAGAAAACAATGCATTGATTGCCCTGTATGAGCATGAGGATCAAGAT GATGTTCAAAGAAGCAGTATCACACATATTGAAATAGAGCCCTTGACCATTTTAGGGGTT GTAGCTGGACTTATTCCTTATCCACATCATAACCAGTCTCCCCGTAACACTTACCAGTGT GCAATGGGTAAGCAAGCAATGGGAAATATCGCGTATAATCAGTTATTCCGAGCAGATTCT CTACTCTATTTACTAGTGTATGCACAGCGTCCCCTTCTTACAACAAAAACTATTGAGTTG GTTGGATATGATAAGCTTGGGGCTGGACAGAATGCAACTGTTGCTGTCATGAGTTATAGT GGATACGATATTGAAGATGCAATTGTAATGAACAAATCATCCCTTGACCGAGGTTTTGGT CGTTGCATTGCAATGAAAAAGTACACTGTGACAAAGGAGAAGTATGAAGGTGGTTATTCA GACAGGATCGTTAAGCCCCAGAGGGATAAAGATGGTGCTCTGTTAAAACAGAACATGCGG GCATTGGATGAAGATGGATTTGCTGCACCAGGTCTAATAATACGCAATCATGATATCTAT GTGAACAAGCAAACTCCCAGAAATACCAAGAGAGATTCTGGTGCTCATTTAACAGACAGG GACTATAAGGACTCGCCTGCTGTCTACAAAGGTGTTGATGGCGAGACCACTGTTGTAGAT CGTGTAATGCTTTGTTCAGATACAGATGAGAAATTAATCATCAAATGTATTATCCGTCAC ACTAGGCGTCCAGAGGTTGGTGACAAATTCAGTAGCAGACATGGACAGAAAGGTGTTTGT GGTACCATTGTTCAGCAGGAAGACTTCCCCTTCTCTGAGAGAGGAATATGCCCTGATTTG ATTATGAATCCCCATGGATTTCCAAGTCGAATGACAATAGGTAAAATGATTGAACTTCTT GGGGGGAAGGCTGGCGTATCTTGTGGTCAATTTCATTATGGCAGTGCATTTGGGGAACCA AGTGGTAATGCTGATAAGGTTGAAGATATAAGCCGTACTCTGGTAAAGCATGGCTTCAGC TATAATGGAAAAGATCTCTTGTACTCAGGAATTTTAGGCCATCCTTGTCAGGCATATGTA TTCATGGGGCCAATCTACTACCAGAAGTTGAAGCACATGGTTCTTGATAAGATGCATGCT CGAGCTAGTGGACCACGAGTATTGCTGACCCGGCAACCTACTGAAGGGCGAAGTCGTGAT GGAGGCCTACGTCTTGGTGAGATGGAGCGTGACTGTTTAATCGCATACGGTGCTAGCATG CTAATCTTTGAACGTCTACTAATATCTAGTGATCCATATCAAGTACAGGTTTGCAGAAAA TGTGGCTTGTTAGGCTATTACAATCATAAACTGAAGGCTTCCTACTGTTCCATGTGCAAA AATGGAGAAAATATGGCCAAGATGAGGATGCCGTATGCTTGCAAGCTTTTATTCCAGGAG CTGCAAGCAATGAACGTTGTTCCACGATTGAAGTTAACTGAAGGATAA

Peptide Sequence

PEP ID	Os03t0403100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:16421056:16439493:1 gene:Os03g0403100 transcript:Os03t0403100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-directed RNA polymerase subunit. (Os03t0403100-01)
Sequence	MERTEEEEAPAAKDPNASLPSPTYRSLAAPVTKPVDKFALLPAFLKVRGLVKEHIDSFNY FITKGIRNIVKANNRIEARNNPSIFLRYNSVRVGVPSVQVQYIAEKITPHFCRLTDRTYS APVLADIEYTVGKQYELKRKPNFIIGYLPIMLRSHACVLNGKDEAELARYGECPLDPGGY FIVKGTEKVILIQEQLSKNRIIIDTDSKGRVIASVTSSTHEIKSKTVIFMEKEKIYLQLN QFTKPIPIIVVMKAMGMESDQEVAQMVGRDPRYGDLLYPSIQECAFERIYTQKQALQYMD DKVMYPGAGNQKEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFD DKDYVGNKRLELSGQLISLLFEDLFKTMNSNAVELMNKTSEKIHSSPLDLSLHIKENIIT HGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQ PSQWGMLCPCDTPEGEACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIH ASGSFLVMFNGLILGKHRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRV CRPLIIADKGIPRVKEHHMKQLRDGIRSFDDFLRDGLIEYLDVNEENNALIALYEHEDQD DVQRSSITHIEIEPLTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADS LLYLLVYAQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG RCIAMKKYTVTKEKYEGGYSDRIVKPQRDKDGALLKQNMRALDEDGFAAPGLIIRNHDIY VNKQTPRNTKRDSGAHLTDRDYKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRH TRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELL GGKAGVSCGQFHYGSAFGEPSGNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYV FMGPIYYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASM LIFERLLISSDPYQVQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQE LQAMNVVPRLKLTEG

Transcript Sequence

Transcript ID	Os03t0403100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:16421056:16439493:1 gene:Os03g0403100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-directed RNA polymerase subunit. (Os03t0403100-01)
Sequence	GCGCCGCCGCCGCCGCCGCCACCGCCACCGCCGCCCTCCCACTCCCACTCCCACTTCCAC CCCATCCAATCCGCCGCCGTCACGACCGTCGCCGCTGCAGTCGACGACGACATGGAACGC ACTGAGGAGGAGGAGGCGCCCGCCGCCAAGGACCCCAACGCGTCGCTGCCGTCGCCGACG TACAGGTCGCTCGCCGCGCCCGTCACCAAGCCCGTCGACAAGTTCGCGCTCCTTCCTGCC TTCCTCAAGGTTAGAGGCCTCGTTAAGGAGCACATCGACTCCTTCAACTACTTCATCACC AAGGGAATTAGGAACATTGTCAAGGCAAACAATCGCATCGAAGCGCGCAACAACCCCTCT ATTTTTCTTAGGTACAATAGTGTAAGGGTTGGTGTGCCCTCCGTACAAGTACAATACATC GCTGAAAAAATCACGCCACACTTTTGCCGCCTTACCGATCGCACATACTCTGCTCCTGTG TTGGCTGATATTGAATACACAGTTGGAAAGCAGTATGAGCTGAAAAGGAAGCCTAATTTC ATCATTGGGTACTTGCCAATTATGCTTAGAAGTCATGCATGCGTTCTGAATGGAAAGGAT GAAGCTGAATTAGCAAGATATGGTGAGTGCCCTCTTGATCCTGGTGGTTACTTCATTGTT AAGGGAACCGAGAAGGTCATTCTTATACAAGAACAGCTATCAAAGAATCGTATTATTATC GACACCGATAGTAAAGGAAGGGTGATTGCATCTGTTACGAGCAGCACACATGAAATAAAA AGCAAAACTGTGATTTTTATGGAGAAGGAGAAAATTTATCTACAGTTGAATCAATTCACT AAGCCGATACCTATAATTGTGGTTATGAAAGCGATGGGGATGGAAAGTGACCAAGAGGTT GCACAAATGGTCGGAAGAGATCCAAGATATGGAGATCTCCTATATCCATCTATTCAGGAA TGTGCCTTTGAGAGAATCTATACACAGAAGCAAGCTCTGCAGTACATGGATGACAAGGTG ATGTATCCTGGTGCAGGAAATCAGAAGGAAGGTCGTTCAAAATCAATCCTCCGTGATGTT TTTGTTGCACATGTTCCGGTTGAAAGCGGGAATTTCCGACCAAAGTGCATATACACAGCT GTTATGTTAAGGCGCATGATGGATGCAATCTTGAATGCCGACACTTTTGATGATAAGGAT TATGTAGGAAATAAGAGGCTAGAGCTGTCTGGTCAACTAATATCCCTGCTTTTTGAGGAT TTGTTCAAAACGATGAACTCCAATGCTGTGGAGCTTATGAACAAAACAAGTGAAAAGATC CATTCTAGCCCATTGGATTTAAGCCTGCATATAAAGGAAAATATCATAACCCATGGTTTG GAGAGGGCTATTTCCACAGGAAATTGGGATATTAAACGATTTAGGATGCATAGAAAAGGT GTATCACAGGTTCTTTCAAGATTATCCTACATGGCATCTTTAGGCTATATGACAAGGATA ACACCACAATTTGAGAAGACCCGGAAAACAAGTGGACCTCGTGCTTTGCAGCCTAGTCAG TGGGGTATGCTTTGTCCATGTGATACTCCTGAAGGGGAGGCTTGTGGCTTGACAAAAAAT TTAGCTTTGTTGACCCACGTTACAACAGATCAAGAGGAAGGCCCACTCATGAATCTCTGT TATAGTCTAGGTGTGGAAGATTTATCACTTCTGTCTGGAGAAGAAATCCATGCATCGGGT TCGTTTTTGGTCATGTTCAATGGGTTAATACTGGGGAAACACAGACAACCTCAGAGATTT GCTAATGCTATGAGAAAATTGCGTCGTTCGGGTATAATTGGAGAGTTCGTAAGCATTTTT GTAAACGAGAAGCAGCATTGCATTCACATTGCCTCTGATGGCGGTCGTGTCTGTCGCCCA CTTATAATTGCTGATAAGGGGATACCAAGAGTCAAAGAGCATCATATGAAACAATTGAGA GATGGTATTCGTTCGTTTGATGATTTTCTGCGTGATGGGTTGATCGAATATCTTGACGTT AATGAAGAAAACAATGCATTGATTGCCCTGTATGAGCATGAGGATCAAGATGATGTTCAA AGAAGCAGTATCACACATATTGAAATAGAGCCCTTGACCATTTTAGGGGTTGTAGCTGGA CTTATTCCTTATCCACATCATAACCAGTCTCCCCGTAACACTTACCAGTGTGCAATGGGT AAGCAAGCAATGGGAAATATCGCGTATAATCAGTTATTCCGAGCAGATTCTCTACTCTAT TTACTAGTGTATGCACAGCGTCCCCTTCTTACAACAAAAACTATTGAGTTGGTTGGATAT GATAAGCTTGGGGCTGGACAGAATGCAACTGTTGCTGTCATGAGTTATAGTGGATACGAT ATTGAAGATGCAATTGTAATGAACAAATCATCCCTTGACCGAGGTTTTGGTCGTTGCATT GCAATGAAAAAGTACACTGTGACAAAGGAGAAGTATGAAGGTGGTTATTCAGACAGGATC GTTAAGCCCCAGAGGGATAAAGATGGTGCTCTGTTAAAACAGAACATGCGGGCATTGGAT GAAGATGGATTTGCTGCACCAGGTCTAATAATACGCAATCATGATATCTATGTGAACAAG CAAACTCCCAGAAATACCAAGAGAGATTCTGGTGCTCATTTAACAGACAGGGACTATAAG GACTCGCCTGCTGTCTACAAAGGTGTTGATGGCGAGACCACTGTTGTAGATCGTGTAATG CTTTGTTCAGATACAGATGAGAAATTAATCATCAAATGTATTATCCGTCACACTAGGCGT CCAGAGGTTGGTGACAAATTCAGTAGCAGACATGGACAGAAAGGTGTTTGTGGTACCATT GTTCAGCAGGAAGACTTCCCCTTCTCTGAGAGAGGAATATGCCCTGATTTGATTATGAAT CCCCATGGATTTCCAAGTCGAATGACAATAGGTAAAATGATTGAACTTCTTGGGGGGAAG GCTGGCGTATCTTGTGGTCAATTTCATTATGGCAGTGCATTTGGGGAACCAAGTGGTAAT GCTGATAAGGTTGAAGATATAAGCCGTACTCTGGTAAAGCATGGCTTCAGCTATAATGGA AAAGATCTCTTGTACTCAGGAATTTTAGGCCATCCTTGTCAGGCATATGTATTCATGGGG CCAATCTACTACCAGAAGTTGAAGCACATGGTTCTTGATAAGATGCATGCTCGAGCTAGT GGACCACGAGTATTGCTGACCCGGCAACCTACTGAAGGGCGAAGTCGTGATGGAGGCCTA CGTCTTGGTGAGATGGAGCGTGACTGTTTAATCGCATACGGTGCTAGCATGCTAATCTTT GAACGTCTACTAATATCTAGTGATCCATATCAAGTACAGGTTTGCAGAAAATGTGGCTTG TTAGGCTATTACAATCATAAACTGAAGGCTTCCTACTGTTCCATGTGCAAAAATGGAGAA AATATGGCCAAGATGAGGATGCCGTATGCTTGCAAGCTTTTATTCCAGGAGCTGCAAGCA ATGAACGTTGTTCCACGATTGAAGTTAACTGAAGGATAACTTGAAATACGATGGTCAAGC AGAGCTCAAGCACTGTTGGTACAAGCTTTTGCAGCAAGAAGGCAAGCTGTAAACATGTCG ACGACAGCAATGAACGTCTGAACCTATACATCATTCAGGAGTCGGGATATGTTTGGTTTC TGTACAGAAGAGAGGTAGCTTAGATTTCTTTCTTCATATGAGGGAGACAAAAGTGCAAGG AAGAAAGAGAAGCATACCAACCAATAGCTTCACATGAGCTGTACAGTGGAAACGCTTTAC TTTGTATGCTCCAATGTTAATTTGCTTCCTTCCTCCTTATCTACCATCGTTTCCTTGTAT GCATCCATAGCTTTCAGGAAGTCAATATATCAAAAAAGAAAAAAAAAAGCTTTGCG