Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0401200-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:16293784:16297120:-1 gene:Os03g0401200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C30 description:Similar to DnaJ homolog subfamily B member 4 (Heat shock 40 kDa protein 1 homolog) (Heat shock protein 40 homolog) (HSP40 homolog). (Os03t0401200-01)
Sequence	ATGGAGTGCAATAAGGATGAGGCTCTTAGGGCGAAGGAGATTGCAGAGAGGAAGTTTGAA TCGAAGGACCTGCAGGGGGCCAAGAAGTTCGCCCTGAAGGCGCAGGCTCTCTTTCCTGGG CTTGAGGGCATTGTTCAGATGATCACCACCTTGGATCTCTATCTTGCTTCAGAGGTGCTA ATTTCTGGGGAGAAGGATTGGTACTCTATCCTTTCCGTGGAGTCTTCTGCTGATGATGAG ACTCTAAAGAAGCAGTACAGGAAGTTGGTCCTTCAGCTCCATCCTGACAAGAACAAGTCG GTGGGTGCTGAGGGTGCTTTCAAGATGGTCCAAGAGGCGTGGACTGTGCTGTCGGATAAA ACAAAGAGAGCTCTGTATGACCAAAAAAGGAAACTAATGGTTCTGAAACGGAATACATCT CAAACAAATAAAGCAAGTGCAGCTCCTGGTGCATCCAATGGCTTTTATAATTTTGCAGCC AATGCTGCTGCTTCCAAGGTGACAAGAGGAAACAAGCAAAAGGCAGGACCAGCAACATCT TCAGTGCGCCAGCGCCCACCCCCTCCCCCTCCCCCTCCCCGTCAGGCTCCTGCTCCACCT CCAGCAAAGCCACCTACATTTTGGACCTCATGCAACAAATGCAAGATGAATTATGAATAC CTGAAAGTGTATCTAAATCACAATCTTCTCTGCCCTACCTGCCGTGAGCCATTCCTAGCA CAAGAGGTACCAATGCCACCCACCGAGAGTGTTCATGCTGTACATGATCCGAACATCAGT GGTGCAAATCAAAACACAAATGGTAGTAGAAATTTCCAATGGGGTCCGTTCTCAAGGACA GCTGGCGCAGCTAGTGCTACCGCATCATCTGCTGCTGCTGCTCAAGCCGCGAATGTGGTT CATCACACATATGAGAAAGTTAGGAGAGAGAGGGAGGAGGCACAAGCAGCTGCTAGAAGG GAAGAAGCTCTTCGGAGGAAGTACAATCCACCAAAAAGGCAAGCGAATATCTCAGAGAAT CTTAACCTTGGAACAGGTGGCAACTCATCTAAGAAGATGAGAACTATGGGTAACGATATT GGAATTGGTTCTTCATCCATTCTATCAGGTTCAGGGGCCAATTATTTTGGAGTTCCAGGT GGAAATATATCATTTTCTACCAACAGTGGAGCACATCATTTTCAAGGTGTTAATGGTGGA TTCAGTTGGAAACCCAGACCTCCTACTCGCATCAGCTTAGTCAAGACCTTCACGCAGTTT GATGTTAGAGGTATTTTGATGGAAAAAGCAAAGAGCGATTTAAAGGACAAGCTAAAGGAG ATGCAGACTAAAAGATCACAGGTTGCTGCTAATGGAAAAAAGAATAAGAAAAACATGTTT AAAGAAAGTGGTGGGGATGATGAATCTCTTGCATCAGATGATTCTACTGCACGTCAAGCT GCACATGTTGATCCAGAGGACAATGCTTCTGTTAATAGCACAGATGCTGATGATGAAAAT GATGATCCTTTATCTTATAATGTTCCTGATCCTGATTTCCATGACTTCGATAAGGATCGT ACTGAAGAATGTTTTCAGAGTGATCAAATTTGGGCTACATATGATGATGAAGATGGTATG CCTCGTTATTATGCATTTATTCAGAAAGTTCTCTCCTTGGAGCCATTCCAGCTCAAAATT AGCTTTCTCACATCAAGGACAAACAGTGAATTTGGTTCTTTGAACTGGGTCTCGTCTGGC TTCACAAAGACATGTGGTGATTTCCGGATTTGTAGATATGAAACCTGTGATATACTCAAC ATGTTCTCTCACCAGATTAAATGGGAGAAAGGCCCACGTGGGGTTATAAAAATTTATCCA CAGAAAGGTAACATCTGGGCTGTGTATCGAAATTGGTCCCCTGACTGGGATGAAGATACT CCAGATAAAGTTCTCCATGCCTATGATGTAGTTGAGGTACTGGATGAGTATGACGAGGAT CTTGGCATTTCTGTCATTCCCTTGGTCAAGGTTGCTGGGTTTCGAACAGTATTTCAGCGA AATCAGGACCTGAATGCCATCAAGAAAATTCCCAAAGAAGAGATGTTTAGGTTTTCACAT GAGGTGCCCTTTTATAGGATGTCAGGGGAAGAAGCTCCAAATGTCCCTAAAGATAGCTAT GAGCTCGACCCAGCTGCTATTTCTAAAGAACTTCTTCAGGAGATCACAGAAACAGTGGAA TCGTCAAAGGCAACTTCTGAATGCTGA

Peptide Sequence

PEP ID	Os03t0401200-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:16293784:16297120:-1 gene:Os03g0401200 transcript:Os03t0401200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C30 description:Similar to DnaJ homolog subfamily B member 4 (Heat shock 40 kDa protein 1 homolog) (Heat shock protein 40 homolog) (HSP40 homolog). (Os03t0401200-01)
Sequence	MECNKDEALRAKEIAERKFESKDLQGAKKFALKAQALFPGLEGIVQMITTLDLYLASEVL ISGEKDWYSILSVESSADDETLKKQYRKLVLQLHPDKNKSVGAEGAFKMVQEAWTVLSDK TKRALYDQKRKLMVLKRNTSQTNKASAAPGASNGFYNFAANAAASKVTRGNKQKAGPATS SVRQRPPPPPPPPRQAPAPPPAKPPTFWTSCNKCKMNYEYLKVYLNHNLLCPTCREPFLA QEVPMPPTESVHAVHDPNISGANQNTNGSRNFQWGPFSRTAGAASATASSAAAAQAANVV HHTYEKVRREREEAQAAARREEALRRKYNPPKRQANISENLNLGTGGNSSKKMRTMGNDI GIGSSSILSGSGANYFGVPGGNISFSTNSGAHHFQGVNGGFSWKPRPPTRISLVKTFTQF DVRGILMEKAKSDLKDKLKEMQTKRSQVAANGKKNKKNMFKESGGDDESLASDDSTARQA AHVDPEDNASVNSTDADDENDDPLSYNVPDPDFHDFDKDRTEECFQSDQIWATYDDEDGM PRYYAFIQKVLSLEPFQLKISFLTSRTNSEFGSLNWVSSGFTKTCGDFRICRYETCDILN MFSHQIKWEKGPRGVIKIYPQKGNIWAVYRNWSPDWDEDTPDKVLHAYDVVEVLDEYDED LGISVIPLVKVAGFRTVFQRNQDLNAIKKIPKEEMFRFSHEVPFYRMSGEEAPNVPKDSY ELDPAAISKELLQEITETVESSKATSEC

Transcript Sequence

Transcript ID	Os03t0401200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:16293784:16297120:-1 gene:Os03g0401200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C30 description:Similar to DnaJ homolog subfamily B member 4 (Heat shock 40 kDa protein 1 homolog) (Heat shock protein 40 homolog) (HSP40 homolog). (Os03t0401200-01)
Sequence	AGTTATCCTGACCCCTCCTCGTCAGTTTGTCCGCCCGCCGCCGCCGCCGCCGCCGCCGTC GATCCCCATCCATCGCGCGCGCGAGCGAGCAGGGGGCGCCGTCGTTCGTCCTGCTGCTTC CGCCGCATCCTGGCGGGCACATCCTCCGCCACCGCCGCCCGCGCCGATCCCCACCCATCG CGCGCGCGCGCGAGCGAGCAGGGTCGCCGTCGTTCGTCCTGCTGCTTCCGCCGCATCCAT CCTGGTAACCGGGAGCATCACACGTGCTCGCTCAATTCGGATTAGAAGAAACAGCTTTGT GGTACTTTGGGGTTGGACTGTTTTGTGAATCTGCTGTGAGGGCTTGTTTTTCTTGGTAGC TTTTCGGGATACGACGGAATGGAGTGCAATAAGGATGAGGCTCTTAGGGCGAAGGAGATT GCAGAGAGGAAGTTTGAATCGAAGGACCTGCAGGGGGCCAAGAAGTTCGCCCTGAAGGCG CAGGCTCTCTTTCCTGGGCTTGAGGGCATTGTTCAGATGATCACCACCTTGGATCTCTAT CTTGCTTCAGAGGTGCTAATTTCTGGGGAGAAGGATTGGTACTCTATCCTTTCCGTGGAG TCTTCTGCTGATGATGAGACTCTAAAGAAGCAGTACAGGAAGTTGGTCCTTCAGCTCCAT CCTGACAAGAACAAGTCGGTGGGTGCTGAGGGTGCTTTCAAGATGGTCCAAGAGGCGTGG ACTGTGCTGTCGGATAAAACAAAGAGAGCTCTGTATGACCAAAAAAGGAAACTAATGGTT CTGAAACGGAATACATCTCAAACAAATAAAGCAAGTGCAGCTCCTGGTGCATCCAATGGC TTTTATAATTTTGCAGCCAATGCTGCTGCTTCCAAGGTGACAAGAGGAAACAAGCAAAAG GCAGGACCAGCAACATCTTCAGTGCGCCAGCGCCCACCCCCTCCCCCTCCCCCTCCCCGT CAGGCTCCTGCTCCACCTCCAGCAAAGCCACCTACATTTTGGACCTCATGCAACAAATGC AAGATGAATTATGAATACCTGAAAGTGTATCTAAATCACAATCTTCTCTGCCCTACCTGC CGTGAGCCATTCCTAGCACAAGAGGTACCAATGCCACCCACCGAGAGTGTTCATGCTGTA CATGATCCGAACATCAGTGGTGCAAATCAAAACACAAATGGTAGTAGAAATTTCCAATGG GGTCCGTTCTCAAGGACAGCTGGCGCAGCTAGTGCTACCGCATCATCTGCTGCTGCTGCT CAAGCCGCGAATGTGGTTCATCACACATATGAGAAAGTTAGGAGAGAGAGGGAGGAGGCA CAAGCAGCTGCTAGAAGGGAAGAAGCTCTTCGGAGGAAGTACAATCCACCAAAAAGGCAA GCGAATATCTCAGAGAATCTTAACCTTGGAACAGGTGGCAACTCATCTAAGAAGATGAGA ACTATGGGTAACGATATTGGAATTGGTTCTTCATCCATTCTATCAGGTTCAGGGGCCAAT TATTTTGGAGTTCCAGGTGGAAATATATCATTTTCTACCAACAGTGGAGCACATCATTTT CAAGGTGTTAATGGTGGATTCAGTTGGAAACCCAGACCTCCTACTCGCATCAGCTTAGTC AAGACCTTCACGCAGTTTGATGTTAGAGGTATTTTGATGGAAAAAGCAAAGAGCGATTTA AAGGACAAGCTAAAGGAGATGCAGACTAAAAGATCACAGGTTGCTGCTAATGGAAAAAAG AATAAGAAAAACATGTTTAAAGAAAGTGGTGGGGATGATGAATCTCTTGCATCAGATGAT TCTACTGCACGTCAAGCTGCACATGTTGATCCAGAGGACAATGCTTCTGTTAATAGCACA GATGCTGATGATGAAAATGATGATCCTTTATCTTATAATGTTCCTGATCCTGATTTCCAT GACTTCGATAAGGATCGTACTGAAGAATGTTTTCAGAGTGATCAAATTTGGGCTACATAT GATGATGAAGATGGTATGCCTCGTTATTATGCATTTATTCAGAAAGTTCTCTCCTTGGAG CCATTCCAGCTCAAAATTAGCTTTCTCACATCAAGGACAAACAGTGAATTTGGTTCTTTG AACTGGGTCTCGTCTGGCTTCACAAAGACATGTGGTGATTTCCGGATTTGTAGATATGAA ACCTGTGATATACTCAACATGTTCTCTCACCAGATTAAATGGGAGAAAGGCCCACGTGGG GTTATAAAAATTTATCCACAGAAAGGTAACATCTGGGCTGTGTATCGAAATTGGTCCCCT GACTGGGATGAAGATACTCCAGATAAAGTTCTCCATGCCTATGATGTAGTTGAGGTACTG GATGAGTATGACGAGGATCTTGGCATTTCTGTCATTCCCTTGGTCAAGGTTGCTGGGTTT CGAACAGTATTTCAGCGAAATCAGGACCTGAATGCCATCAAGAAAATTCCCAAAGAAGAG ATGTTTAGGTTTTCACATGAGGTGCCCTTTTATAGGATGTCAGGGGAAGAAGCTCCAAAT GTCCCTAAAGATAGCTATGAGCTCGACCCAGCTGCTATTTCTAAAGAACTTCTTCAGGAG ATCACAGAAACAGTGGAATCGTCAAAGGCAACTTCTGAATGCTGAGTAAAACAGTTGATT GCTTCCAAGATGCCTCTGTTCACCTCCCATTTTGAAGCTATAAATATGTAGACAACGCTA GGTTCTATAGTTTCCTGCCTTTTATTACTTTTGAGTTTTGACCATTACCTTTGCGCACTA GGATAGTTTGAGCTAATCATTCAGGGGAATAGGGGGATAGCTTCTGTTGTAACTGTGGGG TGTTCTGACATGAATTTGTCGTTATAACTATACTATTAAGCAACTCTAGAAGATGAAGTA CTAATTAGAAGCTCATGTGGCAGTTTGTCAGTGGAAGCTTTTAGG