Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0401100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:16282782:16290478:1 gene:Os03g0401100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase domain containing protein, expressed. (Os03t0401100-01)
Sequence	ATGGACTGGAGGGAACCAGCTAACATCTGTGAACAGAAACTACCAACAAAACGGCCATAT CCTTCACTCAGTGACACCAGCAGTGAGGGATCATGCAATCGGTACCCCCGAAATCATTAT GATGATACACCAATGAGAATTAAGTTTATTTGTAATTTTGGTGGTAGATTCTTACCAAGG CCGAGTGATGGTCAGCTCCGGTATGTCGGAGGTGAGAGGCACTTGATTAAAATTAGCCGG GACATTTCATGGAAAGAGCTCATCTGCAAGACATCAAAGTTAATAAGGCGAGCTCATATG ATCAAATACCACCTACCAGGGGAGCCAATGAACATGCTCATTTCCATCACCTGTGATGAT GACCTCCGGAATATGATTGATGAGTGCATTGTTCTAGAACGAACCAAAGTATTGTTGACC GTTTACCTCTTTGCTGATAATGATGATGAGCGCCATGTGCATTTCGTATTAGGAAGCTCA TCCAGTACAGACAAGGAAGCGCAGTTCATTGCTCTTGTCAATGGGCTCGTCAGACCAGGT GAGGAATTGAAAAAGCAGAGGCTTAGAAACACCTCAGCCAATGACCTAGATCAACTTATG TTTGACATCAATGAAGAAGGGTTGTTAGCCAGGACAGACAAAGCTTCACCAAACGTCCAA AGTAAGCTCTCACCAAGTATCGTCAAGGTACCGCTGAAGACATCAAGGGAGCAGCTGGAG AACATGCCTCCAAGTTCCCAACTAGCTGTGACCAACCAAGATTACAAGGCACCAAGAAAT GAAGATAACCCACTGTGTACCGCCAGAAAGACAAATAATGCTCACCTTGGCTCCTCTGTA CCTTCTGAATCCACGTGCATAGGTAAGGTGGAAGCTGGGGCTCATGCTGTCTCCAGGCAT CATCCAGGACAGAGAAATACTGCTACAAACATGACCAGAAAGAGCAACCAAGCAACAGAA GATCAGGTAAAAGGATCACCAAGAAAACAGCTTCCGATACAAGTAGACAGCAGAGGTGTG AATGTAGTGTCATCAAATTCAAACAACAATAGCCTAACGATGCATATACATCTACCTGTT TATGAAAAGGTTGCATCCTTATCAGGGGGTTCAGAGAAAACAGTCAACCAGCCAACCTCC CATGATAACAAGATGAAACTAAAAACATATAGCACCCAAGAAGAAGCTGTGTCTCACTCA GCATCCCATAATAAGACGGAGATGCATAAACGTAGTCTTGACTTTCCTACTCCATCACGA TGCCATGATGATACGTACAACAGTACGAACAGTACAAACCTGCATATTCTGGAGAAGTCA ATTACAACTAACAACAAGCAGAAGCAACAGCCTGCAGTCATGTGCATTGACATTTTGAAG AAAAACCATCCTCCTGAACCGACCAAAGGTGAAACAGTACTTTCCTGTTCTTATCTATCT TCAGACAAGACAACTGAGCTGCAGAAAAATATTCTAGTCAGATCTTCAAGTGAGCGACAA GAACGACCCAACAGTCCAAAACCAGATGAACATTTATCAACAGCCCGTTCTCGATCAGTT GGTGCAGATAGAATTAGCCCTCAGATCAGAACTCCATCGCAAGAATCTAAAGATAATGTT GCACCATTTATCGAAGAGTCTGAGGCATGTGAGACCAAGAACAGTGAGGAAGCTTTATCT GCAAACACAGTAATGGGGAGAGAACTTATAAGTAATGTCCAGGTAATAAACAATGGGGAC CTTGAAGATCTCCGTGAGATAGGCTCTGGTTCATTTGGGACTGTTTTCCATGGAAGATGG AAGGGGACAGATGTTGCCATTAAGCGCATAAAGAACAGCTGTTTTATGTACCCATCGTCT CAGGCAGATAAACTGGTAAGCCTATATGAACTCACCCAGATGATTTGA

Peptide Sequence

PEP ID	Os03t0401100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:16282782:16290478:1 gene:Os03g0401100 transcript:Os03t0401100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase domain containing protein, expressed. (Os03t0401100-01)
Sequence	MDWREPANICEQKLPTKRPYPSLSDTSSEGSCNRYPRNHYDDTPMRIKFICNFGGRFLPR PSDGQLRYVGGERHLIKISRDISWKELICKTSKLIRRAHMIKYHLPGEPMNMLISITCDD DLRNMIDECIVLERTKVLLTVYLFADNDDERHVHFVLGSSSSTDKEAQFIALVNGLVRPG EELKKQRLRNTSANDLDQLMFDINEEGLLARTDKASPNVQSKLSPSIVKVPLKTSREQLE NMPPSSQLAVTNQDYKAPRNEDNPLCTARKTNNAHLGSSVPSESTCIGKVEAGAHAVSRH HPGQRNTATNMTRKSNQATEDQVKGSPRKQLPIQVDSRGVNVVSSNSNNNSLTMHIHLPV YEKVASLSGGSEKTVNQPTSHDNKMKLKTYSTQEEAVSHSASHNKTEMHKRSLDFPTPSR CHDDTYNSTNSTNLHILEKSITTNNKQKQQPAVMCIDILKKNHPPEPTKGETVLSCSYLS SDKTTELQKNILVRSSSERQERPNSPKPDEHLSTARSRSVGADRISPQIRTPSQESKDNV APFIEESEACETKNSEEALSANTVMGRELISNVQVINNGDLEDLREIGSGSFGTVFHGRW KGTDVAIKRIKNSCFMYPSSQADKLVSLYELTQMI

Transcript Sequence

Transcript ID	Os03t0401100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:16282782:16290478:1 gene:Os03g0401100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase domain containing protein, expressed. (Os03t0401100-01)
Sequence	ATGAGAACCAATTGGCAAACTTGATGTGAGCTCCAGTAGTAGCTCAGAAGCTGAAACCCC CAGAGGTCAGTAACTCTTTCCTGCTTTCTACACTTGTTCCCTTTTGATTCAGCTTCTGTG ATGCTTATATTATTATTGTTTAAATTTTAGCAACCCAAAACTCATGAAAAGAAAAACAGA AGGCCTTTAGTCATTTATTGATCTTTGTTACCTTTTTGTATTTCTAAGAATTGATTATTC ATTGCCATGTTCTTGTAGTAAAGTACATATGGCTGCCTTTTTATCATGACTTGACCTGAT AATTCAAAGGTTCCAACAATCTTCCATACCAAGTCTGATGAACGCCCAAATCATACGAAT CCAGAGATTTTGTGAGAAGCAAGCAACATATAACTAAATTACTAGTCAGACTAGCGAGGG ATTGCCTATTCAATTTATGCAGCTTTGCAAATACAACGAATCCTTCAGTTCCAACCATCT CGAGAGAAAAGCCTACAGACATAACTAAACCAGTTCCATGGACTGGAGGGAACCAGCTAA CATCTGTGAACAGAAACTACCAACAAAACGGCCATATCCTTCACTCAGTGACACCAGCAG TGAGGGATCATGCAATCGGTACCCCCGAAATCATTATGATGATACACCAATGAGAATTAA GTTTATTTGTAATTTTGGTGGTAGATTCTTACCAAGGCCGAGTGATGGTCAGCTCCGGTA TGTCGGAGGTGAGAGGCACTTGATTAAAATTAGCCGGGACATTTCATGGAAAGAGCTCAT CTGCAAGACATCAAAGTTAATAAGGCGAGCTCATATGATCAAATACCACCTACCAGGGGA GCCAATGAACATGCTCATTTCCATCACCTGTGATGATGACCTCCGGAATATGATTGATGA GTGCATTGTTCTAGAACGAACCAAAGTATTGTTGACCGTTTACCTCTTTGCTGATAATGA TGATGAGCGCCATGTGCATTTCGTATTAGGAAGCTCATCCAGTACAGACAAGGAAGCGCA GTTCATTGCTCTTGTCAATGGGCTCGTCAGACCAGGTGAGGAATTGAAAAAGCAGAGGCT TAGAAACACCTCAGCCAATGACCTAGATCAACTTATGTTTGACATCAATGAAGAAGGGTT GTTAGCCAGGACAGACAAAGCTTCACCAAACGTCCAAAGTAAGCTCTCACCAAGTATCGT CAAGGTACCGCTGAAGACATCAAGGGAGCAGCTGGAGAACATGCCTCCAAGTTCCCAACT AGCTGTGACCAACCAAGATTACAAGGCACCAAGAAATGAAGATAACCCACTGTGTACCGC CAGAAAGACAAATAATGCTCACCTTGGCTCCTCTGTACCTTCTGAATCCACGTGCATAGG TAAGGTGGAAGCTGGGGCTCATGCTGTCTCCAGGCATCATCCAGGACAGAGAAATACTGC TACAAACATGACCAGAAAGAGCAACCAAGCAACAGAAGATCAGGTAAAAGGATCACCAAG AAAACAGCTTCCGATACAAGTAGACAGCAGAGGTGTGAATGTAGTGTCATCAAATTCAAA CAACAATAGCCTAACGATGCATATACATCTACCTGTTTATGAAAAGGTTGCATCCTTATC AGGGGGTTCAGAGAAAACAGTCAACCAGCCAACCTCCCATGATAACAAGATGAAACTAAA AACATATAGCACCCAAGAAGAAGCTGTGTCTCACTCAGCATCCCATAATAAGACGGAGAT GCATAAACGTAGTCTTGACTTTCCTACTCCATCACGATGCCATGATGATACGTACAACAG TACGAACAGTACAAACCTGCATATTCTGGAGAAGTCAATTACAACTAACAACAAGCAGAA GCAACAGCCTGCAGTCATGTGCATTGACATTTTGAAGAAAAACCATCCTCCTGAACCGAC CAAAGGTGAAACAGTACTTTCCTGTTCTTATCTATCTTCAGACAAGACAACTGAGCTGCA GAAAAATATTCTAGTCAGATCTTCAAGTGAGCGACAAGAACGACCCAACAGTCCAAAACC AGATGAACATTTATCAACAGCCCGTTCTCGATCAGTTGGTGCAGATAGAATTAGCCCTCA GATCAGAACTCCATCGCAAGAATCTAAAGATAATGTTGCACCATTTATCGAAGAGTCTGA GGCATGTGAGACCAAGAACAGTGAGGAAGCTTTATCTGCAAACACAGTAATGGGGAGAGA ACTTATAAGTAATGTCCAGGTAATAAACAATGGGGACCTTGAAGATCTCCGTGAGATAGG CTCTGGTTCATTTGGGACTGTTTTCCATGGAAGATGGAAGGGGACAGATGTTGCCATTAA GCGCATAAAGAACAGCTGTTTTATGTACCCATCGTCTCAGGCAGATAAACTGGTAAGCCT ATATGAACTCACCCAGATGATTTGAAGTTGCAATAGCTAGTTAGCTCCTGAGGTCTTGTA CTCCAGTAATCCAACTTTTAAAAGATCCTCATGATTGTGCATGCCTATCACATGTAGTCA TATTAATTTTATCTTACTCTTTGAATTGAAAAAAGAAATAAAACTATAGATCAACAATCC CACCAATATGTCCTATAAACCAACTACATTGGCCAATATCGGACCCAGACCAGGGAGCTC CTCACCAGGTGAGAACAGCTGGTATGGAATACGACCAAGAGCTGCAGTGGCCAACTGGTT CCAGAAATAAGACACCTCTATGGCTCTGAAATCCTAGTATAGAAATTCAGTATTAACTAA AATTTAGCACTATAAAAAAAATGTGCTGCAAATATTACTGTGTTGCCCATCATGTATTGT CATGCAGATCACAGAATTTTGGAGAGAGGCTGCTATAATCTCAAAACTTCACCATCCAAA TGTTCTAGCACTTTATGGTATTGTAAATAATGGACCTGGGGGAACATTAGCTACTGTAAC AGAATTCATGATCAATGGATCCCTCAAGAAAGTCCTCCTTCACAAAAACAAATATCTTGA TTGGCGCAAGCGCATAATGGTTGCAAAGGATGCAGCCATTGGAATGGAATACTTGCACTC CAAGGACATTGTCCACTTTGATCTGAAATGTGATAACTTGTTGGTGAATATTAAGGATCC CTCTCGTCCCATATGCAAGGTTGCTGATTTTGGTTTGTCGAAGATGAAACAAGCGACTCT TGTTTCTGGTGGAATGAGAGGAACTCTTCCTTGGATGGCTCCAGAATTGCTGACAATGAG TGGCACAAAAGTATCCGAAAAGATTGATGTATATTCATTTGGCATTGTGATGTGGGAAAT TCTGACTGGTGAGGATCCATATGACGGCATGCACTATGGAGGAGTCATAGGGGGCATTTT GAGTAACACACTGAGGCCACTAGTGCCAACTTCATGTAACCTGGAATGGAGGAAACTGAT GGAGCAGTGCTGGTCAACTGAACCTGAGCGACGACCTTCCTTCGCTGAAGTTGCAACCCG TCTTCGCTCCATGCTAGAAGCAAGCCAAAGTGTGACTCTGAGAGTTAATTAGCATCACTC TCTGTCTGTATATCTATCATTTAGGTGCATGCTACAGAATTGCAAATATGAATGTTTCTT CTTATATTGAGTATCGCTTATAAGTATGCAATTGTATAACTCCTGCAGACCAAAGCTGAC TATCGGGTGCCCCCTGTCTTGTATTGTACATGCATGTATCCACAGCATGAAACTGTAGGG GAAAAAGTAAACAGAAGCTCCCTTATCTATGTGAAGATCTTTACACTTTAGTGGGGATAC TTTAAAGTTATCCAGATTCTGC