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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0398250-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:16117258:16117918:1 gene:Os03g0398250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0398250-00)
Sequence

ATGGTCATGGCCGGCGCGATGGTCGCTGGTGCGGCCGCCGCCGCTGCGGCGATTCTTGCT
CTGATGACGACGACGCAGCACGATCGGCTGGGCGAGGAGTGCGACGCGGTGGTAGCGCCG
GCGGCGCAGGAGTGCGCGGTGTGCCTGTGCGAGCTCGCCGGAGCGGCGGGGTGCTCCGAA
CCCGAGGCGGCGGCGGCCGCCGTGCGGACGCTGCCGGGGTGCGGGCACGGGTTCCACGCG
GAGTGCATCGGCAGGTGGCTGCCGTTGCGGGCCGAGTGCCCGATCTGCCGCCGGCCCGTC
GTCACCGGCGCCGACGGGCAGGCGCCCGTCGCTGTGGCCGAAGCTGCGGCGGCGGCGGCG
GCGCCGGCGTGGTCGAGGGCGGCGAGGATGGCGTGCGAGTTCGGCGACGGGCGGGTGGTG
TGGACGCGTAGCCCGTCTGCGTAG

Peptide Sequence

PEP ID

Os03t0398250-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:16117258:16117918:1 gene:Os03g0398250 transcript:Os03t0398250-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0398250-00)
Sequence

MVMAGAMVAGAAAAAAAILALMTTTQHDRLGEECDAVVAPAAQECAVCLCELAGAAGCSE
PEAAAAAVRTLPGCGHGFHAECIGRWLPLRAECPICRRPVVTGADGQAPVAVAEAAAAAA
APAWSRAARMACEFGDGRVVWTRSPSA

Transcript Sequence

Transcript ID

Os03t0398250-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:16117258:16117918:1 gene:Os03g0398250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0398250-00)
Sequence

ACTCGATCATGGTCATGGCCGGCGCGATGGTCGCTGGTGCGGCCGCCGCCGCTGCGGCGA
TTCTTGCTCTGATGACGACGACGCAGCACGATCGGCTGGGCGAGGAGTGCGACGCGGTGG
TAGCGCCGGCGGCGCAGGAGTGCGCGGTGTGCCTGTGCGAGCTCGCCGGAGCGGCGGGGT
GCTCCGAACCCGAGGCGGCGGCGGCCGCCGTGCGGACGCTGCCGGGGTGCGGGCACGGGT
TCCACGCGGAGTGCATCGGCAGGTGGCTGCCGTTGCGGGCCGAGTGCCCGATCTGCCGCC
GGCCCGTCGTCACCGGCGCCGACGGGCAGGCGCCCGTCGCTGTGGCCGAAGCTGCGGCGG
CGGCGGCGGCGCCGGCGTGGTCGAGGGCGGCGAGGATGGCGTGCGAGTTCGGCGACGGGC
GGGTGGTGTGGACGCGTAGCCCGTCTGCGTAGGAGCTCTGATTGATCATTATTAGCTCGA
TCAAAACAATAGCCTCCATTTCTTTTCCATATATTGTTACTGTTTGCTAATGGTTATTAC
TCTCTCTCCGTTCATTGTTCCTGTAAGAGATGATATTTCTAGGTTTTTTTTTTACGAAAC
CTAGGTAAATTTTCTCCGAGGGCTGACTAAATTTATAAAAAATATAGTAATATATTATAT
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