Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0397300-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:16051297:16058311:1 gene:Os03g0397300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metallophosphoesterase domain containing protein. (Os03t0397300-01)
Sequence

ATGCAGAGCGTGACGCGGCTGACGCTGCTGCTGTGCGCGGCCTGGGCGGCCGCGCTGCTC
TACGGCGAGATGGGCGCCTACTGGGCCGCCCGCCTCTCCTGCTCCTGGCCCTCCTCCTCC
TCATCGCCGCCCTCGTCCTTGTCTCCGAATAATCATGTGAAGATTGCTGTTGTTGCCGAT
CCACAGCTTATGGACAGCACCTCCCTTGGCCTTCCACCGAGCTCAATTGCGCTGCAAGCT
GCTGAGTTCTACACGGATTTGAACATGAGAAGGTCCTTTCAGTCTGTTGTACTTCCATTC
AAGCCAGACATGCTATTATTTCTTGGTGATCACTTTGATGGGGGCCCATATATGTCCAAT
GAAGAGTGGCATGAATCGTTGTCTCGCTTTAAGCATATATTCAGCATGAATGAACATATA
ACAAATCCAAACATCCCAATCTACTACCTTTCAGGAAATCATGATATTGGCTACTCAGCA
TTTCACAAAATTCATCCTGAGGTGATTTCTCGGTATGAAAAAGAATTTGGATCAAGAAAT
TACCAATTTTTGGCTGGGAAGGTGGATTTTGTTGTTGTTGATGCCCAAACTCTTGATGGA
GCTAAAGAAAGCAAAGAAAGATCCTCCTCTTGGGAGTTCATCAAAGCATTGTCACCTGGT
AACAAAACAAACCCAAAGGTTCTACTAACACATATTCCACTCTACCGACCTGACAATTCT
CCTTGCGGTCCACATCGTTCTTCACCTGTTATCAATCAGAGGGTATCTAATGCAGCCATG
GATCAAGGGATAACCTACCAGAATTATCTGAGCAAAGAGACTTCTGACCTCTTGCTACAC
TTGTTGAAGCCTGTTCTTGTTCTCTCAGGCCATGATCATGACCAGTGTACAGTAGTTCAT
CCCACTCCTTTTGGACCAGTAACGGAGCATACCCTTGGTACAATAAGTTGGCAACAGGGG
AATCTCTATCCATCTTTTATGCTTCTATCTGCTGGGCCCAAGCTGCCAGCAAATTCTACT
GATATAGAACATGAGGTTCTGACGAATCTTTGTTTTCTGCCTAAACAAACTCATATCTAT
ATATGGTATATCTTCCAGTTTGTGGTGACGCTTCTTCTGCTTATCTTGTGGCCAACAAAT
GGTCTCAGATCTCTTCCGTACGTGAACTCATTTGTAAGCTTCATGCGGTCAGTGGCTGCT
GAATTGTTTTCAAGAACGAAAGAAAAAGATGACGAGGAAGATGGTGAATATGAAATGGTC
TGGGATGCAGAGGGATCCATGCACCTGGTTAAAAAGGCCGTGGCAAGAACCCCCAGCACT
AGCTCAGACTCAAGAACTACAGGACGGGGAAATGTTGTTGCAAGGCCAACAGCCAGAAAG
AATCAACCGGAGCCTGATTCATCGGTTCTTGTTGAGATGAGCTCAGAAATGATATCAGAA
GATGGAGGAAAGGTGCCTCGCTCAAGCAAATTGAAAATAAGGAGGGTGCTTCAGAGGCTG
TTTCGTGTCATTCAGTCAATTGTTGTCATTGCCGCATTGAATGTCCCTCTATACATGATG
CTTCTGTTCAAGGATTGGATCGACCGTTGA

Peptide Sequence

PEP ID

Os03t0397300-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:16051297:16058311:1 gene:Os03g0397300 transcript:Os03t0397300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metallophosphoesterase domain containing protein. (Os03t0397300-01)
Sequence

MQSVTRLTLLLCAAWAAALLYGEMGAYWAARLSCSWPSSSSSPPSSLSPNNHVKIAVVAD
PQLMDSTSLGLPPSSIALQAAEFYTDLNMRRSFQSVVLPFKPDMLLFLGDHFDGGPYMSN
EEWHESLSRFKHIFSMNEHITNPNIPIYYLSGNHDIGYSAFHKIHPEVISRYEKEFGSRN
YQFLAGKVDFVVVDAQTLDGAKESKERSSSWEFIKALSPGNKTNPKVLLTHIPLYRPDNS
PCGPHRSSPVINQRVSNAAMDQGITYQNYLSKETSDLLLHLLKPVLVLSGHDHDQCTVVH
PTPFGPVTEHTLGTISWQQGNLYPSFMLLSAGPKLPANSTDIEHEVLTNLCFLPKQTHIY
IWYIFQFVVTLLLLILWPTNGLRSLPYVNSFVSFMRSVAAELFSRTKEKDDEEDGEYEMV
WDAEGSMHLVKKAVARTPSTSSDSRTTGRGNVVARPTARKNQPEPDSSVLVEMSSEMISE
DGGKVPRSSKLKIRRVLQRLFRVIQSIVVIAALNVPLYMMLLFKDWIDR

Transcript Sequence

Transcript ID

Os03t0397300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:16051297:16058311:1 gene:Os03g0397300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metallophosphoesterase domain containing protein. (Os03t0397300-01)
Sequence

GAGCCCGAACGAACCGACCGGACCGGGGGTTTCGTTGGCAGATCTCGCCGGCCGCCGCCG
CCGCCGCCGCCGCGAGCAGTTCGGCCGGCCAGCCAGCCACATCGGCGGAGTGAGTGTGTG
TGTGTGGGGGGGAGATGCAGAGCGTGACGCGGCTGACGCTGCTGCTGTGCGCGGCCTGGG
CGGCCGCGCTGCTCTACGGCGAGATGGGCGCCTACTGGGCCGCCCGCCTCTCCTGCTCCT
GGCCCTCCTCCTCCTCATCGCCGCCCTCGTCCTTGTCTCCGAATAATCATGTGAAGATTG
CTGTTGTTGCCGATCCACAGCTTATGGACAGCACCTCCCTTGGCCTTCCACCGAGCTCAA
TTGCGCTGCAAGCTGCTGAGTTCTACACGGATTTGAACATGAGAAGGTCCTTTCAGTCTG
TTGTACTTCCATTCAAGCCAGACATGCTATTATTTCTTGGTGATCACTTTGATGGGGGCC
CATATATGTCCAATGAAGAGTGGCATGAATCGTTGTCTCGCTTTAAGCATATATTCAGCA
TGAATGAACATATAACAAATCCAAACATCCCAATCTACTACCTTTCAGGAAATCATGATA
TTGGCTACTCAGCATTTCACAAAATTCATCCTGAGGTGATTTCTCGGTATGAAAAAGAAT
TTGGATCAAGAAATTACCAATTTTTGGCTGGGAAGGTGGATTTTGTTGTTGTTGATGCCC
AAACTCTTGATGGAGCTAAAGAAAGCAAAGAAAGATCCTCCTCTTGGGAGTTCATCAAAG
CATTGTCACCTGGTAACAAAACAAACCCAAAGGTTCTACTAACACATATTCCACTCTACC
GACCTGACAATTCTCCTTGCGGTCCACATCGTTCTTCACCTGTTATCAATCAGAGGGTAT
CTAATGCAGCCATGGATCAAGGGATAACCTACCAGAATTATCTGAGCAAAGAGACTTCTG
ACCTCTTGCTACACTTGTTGAAGCCTGTTCTTGTTCTCTCAGGCCATGATCATGACCAGT
GTACAGTAGTTCATCCCACTCCTTTTGGACCAGTAACGGAGCATACCCTTGGTACAATAA
GTTGGCAACAGGGGAATCTCTATCCATCTTTTATGCTTCTATCTGCTGGGCCCAAGCTGC
CAGCAAATTCTACTGATATAGAACATGAGGTTCTGACGAATCTTTGTTTTCTGCCTAAAC
AAACTCATATCTATATATGGTATATCTTCCAGTTTGTGGTGACGCTTCTTCTGCTTATCT
TGTGGCCAACAAATGGTCTCAGATCTCTTCCGTACGTGAACTCATTTGTAAGCTTCATGC
GGTCAGTGGCTGCTGAATTGTTTTCAAGAACGAAAGAAAAAGATGACGAGGAAGATGGTG
AATATGAAATGGTCTGGGATGCAGAGGGATCCATGCACCTGGTTAAAAAGGCCGTGGCAA
GAACCCCCAGCACTAGCTCAGACTCAAGAACTACAGGACGGGGAAATGTTGTTGCAAGGC
CAACAGCCAGAAAGAATCAACCGGAGCCTGATTCATCGGTTCTTGTTGAGATGAGCTCAG
AAATGATATCAGAAGATGGAGGAAAGGTGCCTCGCTCAAGCAAATTGAAAATAAGGAGGG
TGCTTCAGAGGCTGTTTCGTGTCATTCAGTCAATTGTTGTCATTGCCGCATTGAATGTCC
CTCTATACATGATGCTTCTGTTCAAGGATTGGATCGACCGTTGAATAGAGTGCGAAAGCC
TAGTTCTATCAGTAATTAAGGGATACAACTATAGGAGGACTTGCAAATGCAAGGTCGAAT
AATTAATTTGATATTGCTTTGGTTGACACAGAAAAATGATTTACCAGTTCAACCAGGGTG
ATCGTGTTGTGCATCAACGTTCAGTGGCCCGTTCTTTTGTCTGTTAGGCCTAGAGCTATA
CTTTTTTGTACAATGTTCATACCAGTAGATATTGCTTGAAGATCACAGATGGTTCAGTAG
AAGTATCAGATTTTGGTTGTATCTCCACCTGACCTGACACACGTAATGCGGCATATAGGA
GAGGGCATTGTACTGTATATTCCAACAATCTTTTTATGTTCTTCTAAAAGTCCACCAGAT
ATTATTAATTACATG