Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0396900-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:16039034:16045538:1 gene:Os03g0396900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0396900-01);Similar to PIMT. (Os03t0396900-02)
Sequence	ATGCCGGGGGACGCGGAGGACCTGCCGCCGGCGATAACGAAGCTGGGGCGGCACTTCAGG CTCACGGAAGCGCACATCTGGGATGGCTGGTACGCCGCTGGCGCCGACGTGAGCCACAGG AGCTGGCACTCCGATGATATCGATTCCGGCGGCTGTTGTCAAACAGATAAAGTCCAAAAC AAGCCAACCAAACAGACAGATGAAGGCGATTTGTTTGTTGAAGATTTAGAATTGTCCAAC CTGATGGGTTCTTTGGGGCTTCCTGTTTCATTCAGCACAAGTAAAGAGAAAAAGAATGCA CCCAATAAGGTAAAGAAGAATGGAAGGAGAGTCTCCTACGAAGCAGCAAATACTCTAATC GACGATGATTCAAGGACATGCACGGGTACTAAAGAAACTGAAAGTATTGTTCAGTTGATG GCTTGTGTGGAGCAAACTAACCCATGCAGTTCATCTAGGATCACTGTGGGTTACAGTGAA GTCTGCCAAGGTGATATCGAGAAGATGGACAAAGACATTGTTTATGCTAATGAACAGGAA GAGTCTGGTGATCTCTGCTCTTCTAAAGTATTATCAAGTAGCAAAGCTGAAGATAACTAT GAACATGAGACTTGTCAGTTTCATGCTAACATGAACAACCCAGTAAAAGCAGATTCTCCT GTTCGAGAAAATGAAACTGCAGAAGTTGTCTTGAAATTGAACAAGGAGATGCTGGGGCAA AACTCTGTTGATAATGAATCTAGATTCTCCTCTGCTGAGATTTGTATGGAAGGAGGATTA TCAACAATAAAAGATCAACTATCTGGGGAAACTCCTTCAACATCCCATGATAATAAGGAT GTTGATCATGAAACTTGTCTAAGTTCAGCAGAGCCATCTCCTGTGGATAATAATCCTGCC CAAAAGTCTGACAGCAGCTTTTACTTCGAATATGGTGATTGGAGAGTCCTGTGGGATCCA TTCTACAGTCGGTATTACTTCTATAACATCTTGACACAGGAGTCTACATGGTATCCTCCT CACGGATTGGAGGATTTTGCATCACATTCTAACACATGTATACCTGAAGACCTGGACGAA TTTGGCTCACAAAATAAAAGCACACCGGCACAAGAACATGATCAGGCTGGTGGTGACAAG CATTTGGATGAGCAGGGGCAAGCTTGTTACAGTGAATTGAGCAATTTATCAGATATTCCT GATGGAGAGAGAATAAATCAATGTATGGTAACTTTCACCGATGAAGCACGCCACACTGAT AATATTCATCATCAGAATGATAGTTCAATGAGTGAAATTTCAGAGATGAATCAGGAGATT GGTCGTACCAAAAAGAAAAAGAGAGTAAGGAGATCTAAGTCATATCATTCATGTCAAGAC TTGGCAGGGAACATCTCCAATGACATTGCCAAGTACTGGGCTCAGCGGTATTCACTTTTC TCCCTTTTTGATAGTGGTATAAAAATGGATGAAGAAGGATGGTTTTCAGTGACACCAGAG CTCATCGCAAAGCATCATGCATCTCGCGTTGGTGCCGGCATTGTGATTGACTGTTTCACA GGAGTTGGCGGAAATGCCATCCATTTTGCCAACAAGTGCAGGCATGTTATCGCTATTGAT ATTGATCCCCAAAAGATTGATTGCGCGCAGCATAATGCAACTGTCTATGGAGTACATGAT CATATAGACTTCGTTAGAGGTGATTTTATTCATGTGGCGCCTCGTCTGAAGGGAGAAACT GTTTTTATGTCGCCTCCTTGGGGTGGACCAGACTATGCCAAAGTAGATGTATATGATATC AAAACCATGCTTAAGCCTTGTGATGGGTATTCTCTCTTTAAACTTGGTACATCAATCGCT TCGAGGGTGGTGATGTTTCTTCCTCGTAACATTGACCAAAATCAATTGGCAGACATGTGC CTGTCAGTTGATCCTCCTTGGGCAGTTGAGGTAGAGAAGAATTTCCTCAATGGGAAGCTG AAAGCCATAACAGCATATTTTGAGCAGCAGGATGGTTCAGATGTGCAGGACGCTAGTGAT ACAAACCCCCAAAACCCAGAATACCATGCTTAG

Peptide Sequence

PEP ID	Os03t0396900-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:16039034:16045538:1 gene:Os03g0396900 transcript:Os03t0396900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0396900-01);Similar to PIMT. (Os03t0396900-02)
Sequence	MPGDAEDLPPAITKLGRHFRLTEAHIWDGWYAAGADVSHRSWHSDDIDSGGCCQTDKVQN KPTKQTDEGDLFVEDLELSNLMGSLGLPVSFSTSKEKKNAPNKVKKNGRRVSYEAANTLI DDDSRTCTGTKETESIVQLMACVEQTNPCSSSRITVGYSEVCQGDIEKMDKDIVYANEQE ESGDLCSSKVLSSSKAEDNYEHETCQFHANMNNPVKADSPVRENETAEVVLKLNKEMLGQ NSVDNESRFSSAEICMEGGLSTIKDQLSGETPSTSHDNKDVDHETCLSSAEPSPVDNNPA QKSDSSFYFEYGDWRVLWDPFYSRYYFYNILTQESTWYPPHGLEDFASHSNTCIPEDLDE FGSQNKSTPAQEHDQAGGDKHLDEQGQACYSELSNLSDIPDGERINQCMVTFTDEARHTD NIHHQNDSSMSEISEMNQEIGRTKKKKRVRRSKSYHSCQDLAGNISNDIAKYWAQRYSLF SLFDSGIKMDEEGWFSVTPELIAKHHASRVGAGIVIDCFTGVGGNAIHFANKCRHVIAID IDPQKIDCAQHNATVYGVHDHIDFVRGDFIHVAPRLKGETVFMSPPWGGPDYAKVDVYDI KTMLKPCDGYSLFKLGTSIASRVVMFLPRNIDQNQLADMCLSVDPPWAVEVEKNFLNGKL KAITAYFEQQDGSDVQDASDTNPQNPEYHA

Transcript Sequence

Transcript ID	Os03t0396900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:16039034:16045538:1 gene:Os03g0396900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0396900-01);Similar to PIMT. (Os03t0396900-02)
Sequence	CCGACGCTTTTCCCCACCCGACAAAGCCGCCAACTCCCCCCTCCGCTCTCCTCCGGCTCG CCGGCCTCGCCAGTCGGCAGCCGCCGCCTCTTCCCGCCCCTCTAATCTCCGGCGCTCGAT GCCGGGGGACGCGGAGGACCTGCCGCCGGCGATAACGAAGCTGGGGCGGCACTTCAGGCT CACGGAAGCGCACATCTGGGATGGCTGGTACGCCGCTGGCGCCGACGTGAGCCACAGGAG CTGGCACTCCGATGATATCGATTCCGGCGGCTGTTGTCAAACAGATAAAGTCCAAAACAA GCCAACCAAACAGACAGATGAAGGCGATTTGTTTGTTGAAGATTTAGAATTGTCCAACCT GATGGGTTCTTTGGGGCTTCCTGTTTCATTCAGCACAAGTAAAGAGAAAAAGAATGCACC CAATAAGGTAAAGAAGAATGGAAGGAGAGTCTCCTACGAAGCAGCAAATACTCTAATCGA CGATGATTCAAGGACATGCACGGGTACTAAAGAAACTGAAAGTATTGTTCAGTTGATGGC TTGTGTGGAGCAAACTAACCCATGCAGTTCATCTAGGATCACTGTGGGTTACAGTGAAGT CTGCCAAGGTGATATCGAGAAGATGGACAAAGACATTGTTTATGCTAATGAACAGGAAGA GTCTGGTGATCTCTGCTCTTCTAAAGTATTATCAAGTAGCAAAGCTGAAGATAACTATGA ACATGAGACTTGTCAGTTTCATGCTAACATGAACAACCCAGTAAAAGCAGATTCTCCTGT TCGAGAAAATGAAACTGCAGAAGTTGTCTTGAAATTGAACAAGGAGATGCTGGGGCAAAA CTCTGTTGATAATGAATCTAGATTCTCCTCTGCTGAGATTTGTATGGAAGGAGGATTATC AACAATAAAAGATCAACTATCTGGGGAAACTCCTTCAACATCCCATGATAATAAGGATGT TGATCATGAAACTTGTCTAAGTTCAGCAGAGCCATCTCCTGTGGATAATAATCCTGCCCA AAAGTCTGACAGCAGCTTTTACTTCGAATATGGTGATTGGAGAGTCCTGTGGGATCCATT CTACAGTCGGTATTACTTCTATAACATCTTGACACAGGAGTCTACATGGTATCCTCCTCA CGGATTGGAGGATTTTGCATCACATTCTAACACATGTATACCTGAAGACCTGGACGAATT TGGCTCACAAAATAAAAGCACACCGGCACAAGAACATGATCAGGCTGGTGGTGACAAGCA TTTGGATGAGCAGGGGCAAGCTTGTTACAGTGAATTGAGCAATTTATCAGATATTCCTGA TGGAGAGAGAATAAATCAATGTATGGTAACTTTCACCGATGAAGCACGCCACACTGATAA TATTCATCATCAGAATGATAGTTCAATGAGTGAAATTTCAGAGATGAATCAGGAGATTGG TCGTACCAAAAAGAAAAAGAGAGTAAGGAGATCTAAGTCATATCATTCATGTCAAGACTT GGCAGGGAACATCTCCAATGACATTGCCAAGTACTGGGCTCAGCGGTATTCACTTTTCTC CCTTTTTGATAGTGGTATAAAAATGGATGAAGAAGGATGGTTTTCAGTGACACCAGAGCT CATCGCAAAGCATCATGCATCTCGCGTTGGTGCCGGCATTGTGATTGACTGTTTCACAGG AGTTGGCGGAAATGCCATCCATTTTGCCAACAAGTGCAGGCATGTTATCGCTATTGATAT TGATCCCCAAAAGATTGATTGCGCGCAGCATAATGCAACTGTCTATGGAGTACATGATCA TATAGACTTCGTTAGAGGTGATTTTATTCATGTGGCGCCTCGTCTGAAGGGAGAAACTGT TTTTATGTCGCCTCCTTGGGGTGGACCAGACTATGCCAAAGTAGATGTATATGATATCAA AACCATGCTTAAGCCTTGTGATGGGTATTCTCTCTTTAAACTTGGTACATCAATCGCTTC GAGGGTGGTGATGTTTCTTCCTCGTAACATTGACCAAAATCAATTGGCAGACATGTGCCT GTCAGTTGATCCTCCTTGGGCAGTTGAGGTAGAGAAGAATTTCCTCAATGGGAAGCTGAA AGCCATAACAGCATATTTTGAGCAGCAGGATGGTTCAGATGTGCAGGACGCTAGTGATAC AAACCCCCAAAACCCAGAATACCATGCTTAGTGAAAAACGCCTGTGCTCAATCATCAAAG GTCAGCGTAATCACAAGGTGCCACTCAGGCCATCGTGTAAGGGCGCGTTCGGCTGTCGTG TGCAGCGGTACCCTGCAGCCTACACCCAGTTCACTTGGTGCAGCAACAAGCTGTAACATG GCTGTGAAACAGCGCTGTACAAGCAGCCGAAGAGGCCCCTCCCTAAGTAGTTGATTTTGG TTCTTACTTGCTAGCATGAAGTTTCTGTAATTATGTCCAGTGTATCTGTTTGTGTCATCA ACCTCTCTGTTATTGCACCGTCCACTGTACGATATATAGCTCTTGCGGCATCCCAGCAAG CATCATGGTGCTGCTTCCCTAGCAAATCTATCTTCGAATGGCATGGGAAAAAGGCTGACG TGATATGTTCTATGCATCGCTCATACTGACTATGTGTTACCACATCGTGGTTTGC