Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0395000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:15924075:15927434:-1 gene:Os03g0395000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:heme oxgenase 2, heme oxygenase-2, Young Leaf Chlorosis 2 description:Stroma-localized heme oxygenase 2, Tetrapyrrole biosynthesis (Os03t0395000-01);Similar to Heme oxygenase 2 (Fragment). (Os03t0395000-02)
Sequence	ATGCCGCTCGCCGCCGCCGTCGCCGCCTCGGCGGTCGTGCCGCCGCGGCCGCCTCCTCCG CCGCCGCGGAGAGCGCGGCCCTTGCGCTCCTTTACTGGACTAATACTAACGAGGGACCTA GCAGCCCTAACGGTGGCCCGCTGCGCTCCCTCCCCTCCTGCCCCCGCGGCGGAGGCGGAG GCGGAGGCGGTGGCGGTGGATGAGGCGCCGCCAGCGAAGCCGCGGCCGCGGCGGTACCCG AGGCAGTACCCCGGCGAGGCGGTGGGCGTCGCCGAGGAGATGCGGTTCGTCGCCATGCGC CTCCGGAACCCCAAGCGGACCACCCTCAAGATGGACGATACGGGGGCCGAGGAGGAGGTG GGCGATGGCGTCAGTGAGGATGCGTCGGCGTCAGAGGAGGAGGAGGAGGAGGAGGACGAC GACGACGTGGTTGAGGAGGAGGAGGAGGGAGCGGGGTTGGAGGGGGAGTGGATGCCGAGC ATGGAGGGGTTCGTCAAGTACCTGGTGGACAGCAAGCTCGTCTTCGACACCGTCGAGCGG ATCGTAGCCGAGTCCACCGACGTCGCCTATGTTTACTTCAGGAAAAGTGGTCTGGAACGC TCAGCTAGAATTACAAAAGATTTGGAGTGGTTTGGAGGGCAAGGAATTGCAGTACCAGAG CCAAGTACTGCTGGATCAACATATGCAACTTATCTGACTGAACTTGCTGAGAGCAATGCC CCAGCCTTCCTTTCCCACTATTACAATATTTATTTTGCACATACAACTGGAGGGGTGGCT ATAGGTAACAAGATATCCAAGAAAATTTTGGAAGGAAGGGAGCTAGAGTTTTACAAATGG GATTCTGATGTAGAACTTTTGCTAAAAGATACCAGGGAGAAGCTTAACGAACTTAGCAAG CATTGGTCTCGGAAGGACAGGAACTTGTGCTTGAAAGAAGCTGCAAAATGTTTCCAGCAT TTGGGGCGGATTGTTCGCTTAATCATCTTATAG

Peptide Sequence

PEP ID	Os03t0395000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:15924075:15927434:-1 gene:Os03g0395000 transcript:Os03t0395000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:heme oxgenase 2, heme oxygenase-2, Young Leaf Chlorosis 2 description:Stroma-localized heme oxygenase 2, Tetrapyrrole biosynthesis (Os03t0395000-01);Similar to Heme oxygenase 2 (Fragment). (Os03t0395000-02)
Sequence	MPLAAAVAASAVVPPRPPPPPPRRARPLRSFTGLILTRDLAALTVARCAPSPPAPAAEAE AEAVAVDEAPPAKPRPRRYPRQYPGEAVGVAEEMRFVAMRLRNPKRTTLKMDDTGAEEEV GDGVSEDASASEEEEEEEDDDDVVEEEEEGAGLEGEWMPSMEGFVKYLVDSKLVFDTVER IVAESTDVAYVYFRKSGLERSARITKDLEWFGGQGIAVPEPSTAGSTYATYLTELAESNA PAFLSHYYNIYFAHTTGGVAIGNKISKKILEGRELEFYKWDSDVELLLKDTREKLNELSK HWSRKDRNLCLKEAAKCFQHLGRIVRLIIL

Transcript Sequence

Transcript ID	Os03t0395000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:15924075:15927434:-1 gene:Os03g0395000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:heme oxgenase 2, heme oxygenase-2, Young Leaf Chlorosis 2 description:Stroma-localized heme oxygenase 2, Tetrapyrrole biosynthesis (Os03t0395000-01);Similar to Heme oxygenase 2 (Fragment). (Os03t0395000-02)
Sequence	GCCGTGCAGGATGCCCGAGTGGATAACCCGTTAAACCCCCCGATGCCGCTCGCCGCCGCC GTCGCCGCCTCGGCGGTCGTGCCGCCGCGGCCGCCTCCTCCGCCGCCGCGGAGAGCGCGG CCCTTGCGCTCCTTTACTGGACTAATACTAACGAGGGACCTAGCAGCCCTAACGGTGGCC CGCTGCGCTCCCTCCCCTCCTGCCCCCGCGGCGGAGGCGGAGGCGGAGGCGGTGGCGGTG GATGAGGCGCCGCCAGCGAAGCCGCGGCCGCGGCGGTACCCGAGGCAGTACCCCGGCGAG GCGGTGGGCGTCGCCGAGGAGATGCGGTTCGTCGCCATGCGCCTCCGGAACCCCAAGCGG ACCACCCTCAAGATGGACGATACGGGGGCCGAGGAGGAGGTGGGCGATGGCGTCAGTGAG GATGCGTCGGCGTCAGAGGAGGAGGAGGAGGAGGAGGACGACGACGACGTGGTTGAGGAG GAGGAGGAGGGAGCGGGGTTGGAGGGGGAGTGGATGCCGAGCATGGAGGGGTTCGTCAAG TACCTGGTGGACAGCAAGCTCGTCTTCGACACCGTCGAGCGGATCGTAGCCGAGTCCACC GACGTCGCCTATGTTTACTTCAGGAAAAGTGGTCTGGAACGCTCAGCTAGAATTACAAAA GATTTGGAGTGGTTTGGAGGGCAAGGAATTGCAGTACCAGAGCCAAGTACTGCTGGATCA ACATATGCAACTTATCTGACTGAACTTGCTGAGAGCAATGCCCCAGCCTTCCTTTCCCAC TATTACAATATTTATTTTGCACATACAACTGGAGGGGTGGCTATAGGTAACAAGATATCC AAGAAAATTTTGGAAGGAAGGGAGCTAGAGTTTTACAAATGGGATTCTGATGTAGAACTT TTGCTAAAAGATACCAGGGAGAAGCTTAACGAACTTAGCAAGCATTGGTCTCGGAAGGAC AGGAACTTGTGCTTGAAAGAAGCTGCAAAATGTTTCCAGCATTTGGGGCGGATTGTTCGC TTAATCATCTTATAGTTCCTCATAGATGAGCAACTGATCAAATCAACCTATAATCTATTC CTGAAGACAGGAAAGCTAGAGATATATTAAACTTGAGGCTTAGTGCAGTCATTTTTGTCG AAGACTACACGTCTTAACTATGTTGAAGTCTGGTACAGAAGGATCTTCTGGTGTGAGACT GAAGCTGATCAGCGAGCACTATCCTGGAGATTGAAAACACCAGGCCACAACAATAGCCTC TTTTCTGGCTTGCATGGTGGAGCTGCTCGTTGGAGTGAGCTCTTGCTTTCAGCAACTTCG AACTGTGCAAAGTTGAAGATGCTTGCTGCTGTCGATCAGGATCTCACGCGTTCAATCGCA ATGATGCCAGCCTGACACAATTCACTTAGCAGCAGAACACCATGCTAGCCAGCCAGGATC CCCCCATGCCTGCCAAAGCTTCGTCTCCTCTTGTACCTCACCACATTATCCATTTATCCT TGCAATGAATTCGCTTTGCTTGTACCAATCCTAGCTACTACTACTACTACCATCTTACAT TATCCTTGCAATC