Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0393900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:15836613:15838422:1 gene:Os03g0393900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A II beta description:Similar to S.tuberosum patatin (Fragment). (Os03t0393900-01)
Sequence	ATGGCGGCGAGCTACTCGTGCCGGCGGACATGCGAGGCGTGCAGCACGAGGGCGATGGCC GGGTGCGTGGTGGGCGAGCCGGCGTCGGCGCCGGGGCAGCGGGTGACGTTGCTGGCGATC GACGGCGGCGGCATCAGGGGCCTCATCCCGGGCACCATCCTCGCCTTCCTCGAGGCCAGG CTGCAGGAGCTGGATGGCCCCGACGCGCGCCTCGCCGATTACTTCGACTGCATCGCCGGG ACCAGCACCGGCGGCCTCATCACCGCCATGCTCGCCGCGCCCGGCGACCACGGCCGCCCG CTCTTCGCCGCCAGCGACATCAACCGCTTCTACCTCGACAACGGCCCACTCATCTTCCCA CAAAAGAGGTGCGGCATGGCGGCGGCCATGGCGGCGCTGACGAGGCCGAGGTACAACGGC AAGTACCTGCAGGGGAAGATCAGGAAGATGCTGGGCGAGACGAGGGTGCGCGACACGCTG ACGAACGTCGTCATCCCCACGTTCGACGTCAGGCTGCTCCAGCCAACCATCTTCTCCACA TACGACGCGAAGAGCATGCCGCTCAAGAACGCGCTCCTCTCCGACATCTGCATCAGCACA TCCGCGGCGCCGACCTACCTCCCCGCGCACTGCTTCCAGACCACCGACGACGCCACCGGC AAGGTCCGCGAGTTCGACCTCATCGACGGCGGCGTCGCCGCCAACAACCCGACGATGGTG GCCATGACGCAGATCACCAAGAAGATAATGGTGAAGGACAAGGAGGAGCTGTACCCGGTA AAGCCGTCGGACTGCGGTAAGTTCCTGGTGCTGTCCGTGGGCACCGGGTCGACGTCGGAC CAGGGGATGTACACGGCGAGGCAGTGCTCGCGGTGGGGGATCGTCCGGTGGCTGCGCAAC AAGGGGATGGCGCCCATCATCGACATCTTCATGGCGGCCAGCTCCGACCTCGTCGACATC CACGCCGCCGTCATGTTCCAGTCGCTGCACAGCGACGGCGACTACCTCCGCATCCAGGAC AACACGCTCCACGGCGACGCCGCCACGGTGGACGCCGCCACCAGGGACAACATGCGGGCG CTCGTCGGGATCGGCGAGCGGATGCTGGCGCAGCGGGTGTCGAGGGTCAACGTCGAGACC GGCAGGTACGTCGAGGTGCCCGGCGCCGGCAGCAACGCCGACGCGCTGAGGGGCTTCGCC AGGCAGCTCTCCGAGGAGAGGAGGGCGAGGCTAGGTCGGCGAAACGCCTGCGGCGGCGGC GGCGAAGGAGAGCCCAGCGGCGTGGCGTGCAAGCGTTAG

Peptide Sequence

PEP ID	Os03t0393900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:15836613:15838422:1 gene:Os03g0393900 transcript:Os03t0393900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A II beta description:Similar to S.tuberosum patatin (Fragment). (Os03t0393900-01)
Sequence	MAASYSCRRTCEACSTRAMAGCVVGEPASAPGQRVTLLAIDGGGIRGLIPGTILAFLEAR LQELDGPDARLADYFDCIAGTSTGGLITAMLAAPGDHGRPLFAASDINRFYLDNGPLIFP QKRCGMAAAMAALTRPRYNGKYLQGKIRKMLGETRVRDTLTNVVIPTFDVRLLQPTIFST YDAKSMPLKNALLSDICISTSAAPTYLPAHCFQTTDDATGKVREFDLIDGGVAANNPTMV AMTQITKKIMVKDKEELYPVKPSDCGKFLVLSVGTGSTSDQGMYTARQCSRWGIVRWLRN KGMAPIIDIFMAASSDLVDIHAAVMFQSLHSDGDYLRIQDNTLHGDAATVDAATRDNMRA LVGIGERMLAQRVSRVNVETGRYVEVPGAGSNADALRGFARQLSEERRARLGRRNACGGG GEGEPSGVACKR

Transcript Sequence

Transcript ID	Os03t0393900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:15836613:15838422:1 gene:Os03g0393900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A II beta description:Similar to S.tuberosum patatin (Fragment). (Os03t0393900-01)
Sequence	ACAGTGACTAGTGACAAACGATCGATCGATCCCTCCATCCACAAACCCTCCTCGATCTCA TCTTCCTTCGTCTCGTCAATGGCGGCGAGCTACTCGTGCCGGCGGACATGCGAGGCGTGC AGCACGAGGGCGATGGCCGGGTGCGTGGTGGGCGAGCCGGCGTCGGCGCCGGGGCAGCGG GTGACGTTGCTGGCGATCGACGGCGGCGGCATCAGGGGCCTCATCCCGGGCACCATCCTC GCCTTCCTCGAGGCCAGGCTGCAGGAGCTGGATGGCCCCGACGCGCGCCTCGCCGATTAC TTCGACTGCATCGCCGGGACCAGCACCGGCGGCCTCATCACCGCCATGCTCGCCGCGCCC GGCGACCACGGCCGCCCGCTCTTCGCCGCCAGCGACATCAACCGCTTCTACCTCGACAAC GGCCCACTCATCTTCCCACAAAAGAGGTGCGGCATGGCGGCGGCCATGGCGGCGCTGACG AGGCCGAGGTACAACGGCAAGTACCTGCAGGGGAAGATCAGGAAGATGCTGGGCGAGACG AGGGTGCGCGACACGCTGACGAACGTCGTCATCCCCACGTTCGACGTCAGGCTGCTCCAG CCAACCATCTTCTCCACATACGACGCGAAGAGCATGCCGCTCAAGAACGCGCTCCTCTCC GACATCTGCATCAGCACATCCGCGGCGCCGACCTACCTCCCCGCGCACTGCTTCCAGACC ACCGACGACGCCACCGGCAAGGTCCGCGAGTTCGACCTCATCGACGGCGGCGTCGCCGCC AACAACCCGACGATGGTGGCCATGACGCAGATCACCAAGAAGATAATGGTGAAGGACAAG GAGGAGCTGTACCCGGTAAAGCCGTCGGACTGCGGTAAGTTCCTGGTGCTGTCCGTGGGC ACCGGGTCGACGTCGGACCAGGGGATGTACACGGCGAGGCAGTGCTCGCGGTGGGGGATC GTCCGGTGGCTGCGCAACAAGGGGATGGCGCCCATCATCGACATCTTCATGGCGGCCAGC TCCGACCTCGTCGACATCCACGCCGCCGTCATGTTCCAGTCGCTGCACAGCGACGGCGAC TACCTCCGCATCCAGGACAACACGCTCCACGGCGACGCCGCCACGGTGGACGCCGCCACC AGGGACAACATGCGGGCGCTCGTCGGGATCGGCGAGCGGATGCTGGCGCAGCGGGTGTCG AGGGTCAACGTCGAGACCGGCAGGTACGTCGAGGTGCCCGGCGCCGGCAGCAACGCCGAC GCGCTGAGGGGCTTCGCCAGGCAGCTCTCCGAGGAGAGGAGGGCGAGGCTAGGTCGGCGA AACGCCTGCGGCGGCGGCGGCGAAGGAGAGCCCAGCGGCGTGGCGTGCAAGCGTTAGTAA CTGTACACGCATCATGCTGACGCGATCTTTTTTATTTTTCTTTTTTTTTTTTTACCTTTC TAGCGGACATGGGGAATAACAAGACGTGACAGTAGTGCAATCGGTTTGTAACGTGCGTAT ACCAACATTGATCCATTTCTTCATC