Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0392600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:15763550:15767310:-1 gene:Os03g0392600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 14 description:Peptidase S10, serine carboxypeptidase family protein. (Os03t0392600-01)
Sequence	ATGCACCGCCGCGAGTTCGCGCTCTTTCTGCTGTATCTGAAGATGGACACACACGCTCTT CCTCTGCTCTGCATCCTCTGCCTCATCACCCTTCTTCAGCTCGACGGCGGCGCTGCCATC TCCGGCGGCACCAACGACGGCTCCGAGCGCTGGGGATACGTCCAAGTCCGGCCAAAGGCG CACCTGTTCTGGTGGTACTACAGGAGCCCGCAGCGGGTGTCGTCGCCGGGGGGGAAGCCA TGGCCGACCATCCTCTGGCTGCAAGGCGGCCCGGGAGCGTCGGGCGTCGGGCTCGGCAAC TTCCTGGAGGTCGGCCCGCTGGACGGCGACCTGAAGCCGCGCGGCTCGACGTGGCTGCAG AAGGCCGACCTCATCTTCGTGGACAACCCGGTGGGGACAGGATACAGCTACGTGGAGGAC GACGCGCTGCTCGTCACGACGGACGGCGAGGCGGCGGCGGACCTGGCGGCGCTGCTCAGG GCGCTCGCCGCCAAGGAGATACCCACCCTGCAGAGCAGCCCGCTGTTCCTCGTCGCCGAG TCCTACGGCGGCAAGTACGCCGCCACGCTCGGCGTCTCCCTCGCCCGGGCCATCCGCGCC GGCGGCCTCAAGCTCACGCTCGCCGGCGTGGCGCTCGGCGACAGCTGGATCTCGCCGGAG GATTTCGCGCTGTCGTACGGGCCGCTTCTGCGGCAGGTGTCGAGGCTGGACAGCAATGGC GCCGACAGCGCGAGCAAGAAAGCACAGGTGGTGAAGCAGCGCATCGCATCGGGGCAGTGG AAGCTGGCGCAGTACGCGCTGAGCAGCATGCTCACCTCGATCGTCGCCAGCAGCGGCCAC GTGGACGTGTACAACTTCCTGCTCGACACCGGGATGGACCCGGTCGCCGCCGGCGCTGCT CCGGCGAGGAGCTTCCCGCCGGCGTACTCGGCGTACCTGGACAGCAAGCTGTCCGTCGGA GACTCCATTCGAAGCGTCATGAATGGAGCCATCAAGGAGAAGCTCAAGATCATCCCTAAA GACGTTGTATGGGAGGAGCAGTCCTACACGGTCTACAATGCGCTGATCAATGACTTCATG AAGCCGAGAATTCAGGAGGTCGATGAGCTCCTGTCGTATGGCGTCAATGTGACGGTGTAC AATGGACAGCTCGATGTGATCTGCTCAACGGTTGGTGCAGAAGCATGGGTTCAGAAGCTC AAATGGGATGGGCTGAAGAACTTCTTGAGATTGCCAAGGCAGCCTCTACATTGTGGCTCT AGTGAAGTCACAAAGGGCTTTGTCAGATCCTACAAAAACCTGCATTTCTACTGGATCCTT GGAGCTGGCCATTTTGTACCTGTTGATCAGCCCTGCATTGCTCTTGACATGATTGGTAGC ATAACGCAATCTTCAGTTCAGTCTCATCCATAG

Peptide Sequence

PEP ID	Os03t0392600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:15763550:15767310:-1 gene:Os03g0392600 transcript:Os03t0392600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 14 description:Peptidase S10, serine carboxypeptidase family protein. (Os03t0392600-01)
Sequence	MHRREFALFLLYLKMDTHALPLLCILCLITLLQLDGGAAISGGTNDGSERWGYVQVRPKA HLFWWYYRSPQRVSSPGGKPWPTILWLQGGPGASGVGLGNFLEVGPLDGDLKPRGSTWLQ KADLIFVDNPVGTGYSYVEDDALLVTTDGEAAADLAALLRALAAKEIPTLQSSPLFLVAE SYGGKYAATLGVSLARAIRAGGLKLTLAGVALGDSWISPEDFALSYGPLLRQVSRLDSNG ADSASKKAQVVKQRIASGQWKLAQYALSSMLTSIVASSGHVDVYNFLLDTGMDPVAAGAA PARSFPPAYSAYLDSKLSVGDSIRSVMNGAIKEKLKIIPKDVVWEEQSYTVYNALINDFM KPRIQEVDELLSYGVNVTVYNGQLDVICSTVGAEAWVQKLKWDGLKNFLRLPRQPLHCGS SEVTKGFVRSYKNLHFYWILGAGHFVPVDQPCIALDMIGSITQSSVQSHP

Transcript Sequence

Transcript ID	Os03t0392600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:15763550:15767310:-1 gene:Os03g0392600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 14 description:Peptidase S10, serine carboxypeptidase family protein. (Os03t0392600-01)
Sequence	CCATTTCATGCACCGCCGCGAGTTCGCGCTCTTTCTGCTGTATCTGAAGATGGACACACA CGCTCTTCCTCTGCTCTGCATCCTCTGCCTCATCACCCTTCTTCAGCTCGACGGCGGCGC TGCCATCTCCGGCGGCACCAACGACGGCTCCGAGCGCTGGGGATACGTCCAAGTCCGGCC AAAGGCGCACCTGTTCTGGTGGTACTACAGGAGCCCGCAGCGGGTGTCGTCGCCGGGGGG GAAGCCATGGCCGACCATCCTCTGGCTGCAAGGCGGCCCGGGAGCGTCGGGCGTCGGGCT CGGCAACTTCCTGGAGGTCGGCCCGCTGGACGGCGACCTGAAGCCGCGCGGCTCGACGTG GCTGCAGAAGGCCGACCTCATCTTCGTGGACAACCCGGTGGGGACAGGATACAGCTACGT GGAGGACGACGCGCTGCTCGTCACGACGGACGGCGAGGCGGCGGCGGACCTGGCGGCGCT GCTCAGGGCGCTCGCCGCCAAGGAGATACCCACCCTGCAGAGCAGCCCGCTGTTCCTCGT CGCCGAGTCCTACGGCGGCAAGTACGCCGCCACGCTCGGCGTCTCCCTCGCCCGGGCCAT CCGCGCCGGCGGCCTCAAGCTCACGCTCGCCGGCGTGGCGCTCGGCGACAGCTGGATCTC GCCGGAGGATTTCGCGCTGTCGTACGGGCCGCTTCTGCGGCAGGTGTCGAGGCTGGACAG CAATGGCGCCGACAGCGCGAGCAAGAAAGCACAGGTGGTGAAGCAGCGCATCGCATCGGG GCAGTGGAAGCTGGCGCAGTACGCGCTGAGCAGCATGCTCACCTCGATCGTCGCCAGCAG CGGCCACGTGGACGTGTACAACTTCCTGCTCGACACCGGGATGGACCCGGTCGCCGCCGG CGCTGCTCCGGCGAGGAGCTTCCCGCCGGCGTACTCGGCGTACCTGGACAGCAAGCTGTC CGTCGGAGACTCCATTCGAAGCGTCATGAATGGAGCCATCAAGGAGAAGCTCAAGATCAT CCCTAAAGACGTTGTATGGGAGGAGCAGTCCTACACGGTCTACAATGCGCTGATCAATGA CTTCATGAAGCCGAGAATTCAGGAGGTCGATGAGCTCCTGTCGTATGGCGTCAATGTGAC GGTGTACAATGGACAGCTCGATGTGATCTGCTCAACGGTTGGTGCAGAAGCATGGGTTCA GAAGCTCAAATGGGATGGGCTGAAGAACTTCTTGAGATTGCCAAGGCAGCCTCTACATTG TGGCTCTAGTGAAGTCACAAAGGGCTTTGTCAGATCCTACAAAAACCTGCATTTCTACTG GATCCTTGGAGCTGGCCATTTTGTACCTGTTGATCAGCCCTGCATTGCTCTTGACATGAT TGGTAGCATAACGCAATCTTCAGTTCAGTCTCATCCATAGAAGTGGGTCAATACAAAGGA TGGAAAGGAAAGAAACTAAACCTAGTTTGCTTTTCATAAGCATATACGAAGGTCTGTTAC GTAGAAGCCAATTGCATTGACAGTATTAGCTGGGCATTTTTCTTTGTTATTATAACATTC TGAGTTTACATCATAAATCAAAGAATATGATTATGTC