Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0391400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:15676873:15678725:1 gene:Os03g0391400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D alpha 6 description:Similar to Phospholipase D nu-2 (Fragment). (Os03t0391400-01)
Sequence

ATCGCCAAGGGCGGGCCGAGGGAGCCATGGCACGACATCCACTGCCGCGTCGAGGGCCCC
GCGGCCTGGGACGTGCTCGACAACTTCGAGCAGCGGTGGCGCAAGCAGGCCGGCAGGGGC
AAGGACAGCCTTCTGGTCACCCTCGACCGGAGCATGGCCGCGCGCGACGCCGACCAGGCC
GACCCGGAGCACTGGAACGTGCAGGTGTTCCGCTCCATCGACGGCGGCGCGGCGGCGGGG
TTCCCGGAGAGCCCCGACGAGGCCGCGGCGGCGGGGCTGGTGTCCGGCAAGGACCAGGTG
ATCGAGCGCAGCATCCAGGACGCGTACATCCACGCGATCCGGCGCGCCCGCGACTTCATC
TACGTCGAGAACCAGTACTTCCTGGGGAGCTCGTACGCGTGGCGCGGCGGCAAGGGCGGC
GTGGCGAGCGTGGAGGGGATCAACGCGCTGCACCTGGTCCCGAGGGAGCTCTCCCTCAAG
ATCGCGAGCAAGATCGCCGCCGGCGAGCGGTTCGCCGTGTACGTGGTGGTGCCGATGTGG
CCGGAGGGCGTGCCGGAGAGCGACTCCGTGCAGGCCATCCTGGACTGGCAGCGGCGCACC
ATGGAGATGATGTACAGGGACGTGGACGCCGCCATCCAGGCCAAGGGGATCCGCGCCGAC
CCCACCGACTACCTCAACTTCTTCTGCCTCGGCAACCGCGAGCGCCTCCCCGTCCCCGGC
GGGTACAGCTACGAGCCAACGGAGCGCCCCGACCCCGACACCGACTACATGAGGGCGCAG
AACGCCCGCCGCTTCATGATCTACGTCCACGCCAAGACGATGATAGTGGACGACGAGTAC
ATCATCGTGGGGTCGGCGAACATCAACCAGAGGTCGATGGACGGCGGGCGGGACACGGAG
ATCGCGATGGGCGCGTACCAGCCGAGCCACCTGGCGTCGGTGAACCGGCCGGCGAGGGGC
CAGGTGCACGGCTTCCGCCTCGCGCTGTGGCACGAGCACCTGGGCAGGGCGGCTGCGGCG
TCGGCCGCCGGCGAACTCCTCCGGCCGTCGAGCCTGGCGAGCGTGAGGCTCGTGAACCAG
GCGGCGCGGCGCCACTGGGACGCGTTCGCGAGAGGCGACGGCGACGGCGCGCCGCCGACG
GAAGACCTCCCGGGCCACCTGATGGCGTACCCGGTGCGCTGGACGGGCTGCGGCGGCAGC
GACGGCAGCGACGGCAGCGACGGCAAGCTCGTCGCGGCGACGGAGACGTTCCCGGACACC
AAGGCGAAGGTGCTGGGTGCCAAGTCTGACGTGCTCCCGCCCATCCTCACCACATGA

Peptide Sequence

PEP ID

Os03t0391400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:15676873:15678725:1 gene:Os03g0391400 transcript:Os03t0391400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D alpha 6 description:Similar to Phospholipase D nu-2 (Fragment). (Os03t0391400-01)
Sequence

IAKGGPREPWHDIHCRVEGPAAWDVLDNFEQRWRKQAGRGKDSLLVTLDRSMAARDADQA
DPEHWNVQVFRSIDGGAAAGFPESPDEAAAAGLVSGKDQVIERSIQDAYIHAIRRARDFI
YVENQYFLGSSYAWRGGKGGVASVEGINALHLVPRELSLKIASKIAAGERFAVYVVVPMW
PEGVPESDSVQAILDWQRRTMEMMYRDVDAAIQAKGIRADPTDYLNFFCLGNRERLPVPG
GYSYEPTERPDPDTDYMRAQNARRFMIYVHAKTMIVDDEYIIVGSANINQRSMDGGRDTE
IAMGAYQPSHLASVNRPARGQVHGFRLALWHEHLGRAAAASAAGELLRPSSLASVRLVNQ
AARRHWDAFARGDGDGAPPTEDLPGHLMAYPVRWTGCGGSDGSDGSDGKLVAATETFPDT
KAKVLGAKSDVLPPILTT

Transcript Sequence

Transcript ID

Os03t0391400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:15676873:15678725:1 gene:Os03g0391400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D alpha 6 description:Similar to Phospholipase D nu-2 (Fragment). (Os03t0391400-01)
Sequence

CATCGCCAAGGGCGGGCCGAGGGAGCCATGGCACGACATCCACTGCCGCGTCGAGGGCCC
CGCGGCCTGGGACGTGCTCGACAACTTCGAGCAGCGGTGGCGCAAGCAGGCCGGCAGGGG
CAAGGACAGCCTTCTGGTCACCCTCGACCGGAGCATGGCCGCGCGCGACGCCGACCAGGC
CGACCCGGAGCACTGGAACGTGCAGGTGTTCCGCTCCATCGACGGCGGCGCGGCGGCGGG
GTTCCCGGAGAGCCCCGACGAGGCCGCGGCGGCGGGGCTGGTGTCCGGCAAGGACCAGGT
GATCGAGCGCAGCATCCAGGACGCGTACATCCACGCGATCCGGCGCGCCCGCGACTTCAT
CTACGTCGAGAACCAGTACTTCCTGGGGAGCTCGTACGCGTGGCGCGGCGGCAAGGGCGG
CGTGGCGAGCGTGGAGGGGATCAACGCGCTGCACCTGGTCCCGAGGGAGCTCTCCCTCAA
GATCGCGAGCAAGATCGCCGCCGGCGAGCGGTTCGCCGTGTACGTGGTGGTGCCGATGTG
GCCGGAGGGCGTGCCGGAGAGCGACTCCGTGCAGGCCATCCTGGACTGGCAGCGGCGCAC
CATGGAGATGATGTACAGGGACGTGGACGCCGCCATCCAGGCCAAGGGGATCCGCGCCGA
CCCCACCGACTACCTCAACTTCTTCTGCCTCGGCAACCGCGAGCGCCTCCCCGTCCCCGG
CGGGTACAGCTACGAGCCAACGGAGCGCCCCGACCCCGACACCGACTACATGAGGGCGCA
GAACGCCCGCCGCTTCATGATCTACGTCCACGCCAAGACGATGATAGTGGACGACGAGTA
CATCATCGTGGGGTCGGCGAACATCAACCAGAGGTCGATGGACGGCGGGCGGGACACGGA
GATCGCGATGGGCGCGTACCAGCCGAGCCACCTGGCGTCGGTGAACCGGCCGGCGAGGGG
CCAGGTGCACGGCTTCCGCCTCGCGCTGTGGCACGAGCACCTGGGCAGGGCGGCTGCGGC
GTCGGCCGCCGGCGAACTCCTCCGGCCGTCGAGCCTGGCGAGCGTGAGGCTCGTGAACCA
GGCGGCGCGGCGCCACTGGGACGCGTTCGCGAGAGGCGACGGCGACGGCGCGCCGCCGAC
GGAAGACCTCCCGGGCCACCTGATGGCGTACCCGGTGCGCTGGACGGGCTGCGGCGGCAG
CGACGGCAGCGACGGCAGCGACGGCAAGCTCGTCGCGGCGACGGAGACGTTCCCGGACAC
CAAGGCGAAGGTGCTGGGTGCCAAGTCTGACGTGCTCCCGCCCATCCTCACCACATGAGG
ATGAGGAAGTCCCCATGCGTCGTCATGCTGTGCTTGCTGAGTGCAGAAATGTTCGTTTAC
GTGCAATGCAAGGTGGTTGTGAACTTACAAGTGT