Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0390200-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:15628350:15632384:-1 gene:Os03g0390200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STRESS/ABA-ACTIVATED PROTEIN KINASE 1 description:Serine/threonine protein kinase, Hyperosmotic stress response (Os03t0390200-01);Serine/threonine-protein kinase SAPK1 (EC 2.7.1.37) (Osmotic stress/abscisic acid-activated protein kinase 1). (Os03t0390200-02)
Sequence	ATGGAGCGGTACGAGGTGATGAGGGACATCGGGTCCGGGAACTTCGGGGTGGCCAAGCTC GTCCGCGACGTCGCCACCAACCACCTCTTCGCCGTCAAGTTCATCGAGAGGGGACTCAAG ATTGATGAACATGTTCAAAGGGAGATTATGAACCACCGATCACTGAAGCATCCAAACATA ATCCGGTTCAAGGAGGTCGTGCTAACTCCCACACATTTGGCAATAGTTATGGAATATGCT GCTGGTGGTGAGCTATTTGAAAGGATTTGCAACGCAGGGAGATTCAGTGAGGATGAGGCA AGGTTCTTCTTCCAACAGCTGATTTCTGGAGTGAGCTATTGTCATTCTATGCAAGTATGC CATAGAGATTTGAAACTCGAAAATACTCTCTTGGATGGCAGTGTCACACCTCGGCTTAAG ATTTGTGATTTTGGTTACTCCAAGTCTTCTGTCCTGCACTCTCAACCGAAATCAACTGTT GGCACACCGGCTTACATTGCTCCAGAGGTCCTCTCTAGAAAGGAATACGATGGAAAGGTA GCTGATGTTTGGTCATGTGGGGTAACACTCTATGTGATGCTTGTTGGTGCGTATCCTTTT GAGGACCCTGATGACCCAAGGAACTTCCGCAAGACGATCACTAGGATACTCAGTGTACAG TATTCAATTCCAGACTACGTTCGAGTTTCAGCGGACTGCAGACATCTCCTGTCCCGGATT TTCGTTGGAAATCCTGAGCAGAGGATAACTATCCCAGAGATCAAGAACCACCCATGGTTC CTGAAGAACCTGCCCATCGAGATGACCGACGAGTACCAGAGGAGCATGCAGCTGGCGGAC ATGAACACGCCGTCGCAGAGCCTGGAGGAGGTCATGGCGATCATTCAGGAGGCCCGGAAA CCGGGCGACGCCATGAAGCTCGCCGGCGCCGGGCAGGTCGCCTGCCTGGGGAGCATGGAT CTCGACGACATCGACGATATCGACGACATTGACATCGAGAACAGCGGGGACTTCGTGTGC GCCTTGTGA

Peptide Sequence

PEP ID	Os03t0390200-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:15628350:15632384:-1 gene:Os03g0390200 transcript:Os03t0390200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STRESS/ABA-ACTIVATED PROTEIN KINASE 1 description:Serine/threonine protein kinase, Hyperosmotic stress response (Os03t0390200-01);Serine/threonine-protein kinase SAPK1 (EC 2.7.1.37) (Osmotic stress/abscisic acid-activated protein kinase 1). (Os03t0390200-02)
Sequence	MERYEVMRDIGSGNFGVAKLVRDVATNHLFAVKFIERGLKIDEHVQREIMNHRSLKHPNI IRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVC HRDLKLENTLLDGSVTPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKV ADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTITRILSVQYSIPDYVRVSADCRHLLSRI FVGNPEQRITIPEIKNHPWFLKNLPIEMTDEYQRSMQLADMNTPSQSLEEVMAIIQEARK PGDAMKLAGAGQVACLGSMDLDDIDDIDDIDIENSGDFVCAL

Transcript Sequence

Transcript ID	Os03t0390200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:15628350:15632384:-1 gene:Os03g0390200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STRESS/ABA-ACTIVATED PROTEIN KINASE 1 description:Serine/threonine protein kinase, Hyperosmotic stress response (Os03t0390200-01);Serine/threonine-protein kinase SAPK1 (EC 2.7.1.37) (Osmotic stress/abscisic acid-activated protein kinase 1). (Os03t0390200-02)
Sequence	ACGAGCGCCCCAGAATCCCTCCCCTCCCTCGTGCACCGCCTCCCGTCCCATCCAGCTCCT TCTTCTTGGCGGGCGAGAGATCGATCGAGCTGGCTGCGTGTGAGCGAGTTGCCACGAGCG GCCAAGAGATTAACGGAGGGGGCGGACCAGCGGAGCGAGGTCGTTGAGGGGATATGGAGC GGTACGAGGTGATGAGGGACATCGGGTCCGGGAACTTCGGGGTGGCCAAGCTCGTCCGCG ACGTCGCCACCAACCACCTCTTCGCCGTCAAGTTCATCGAGAGGGGACTCAAGATTGATG AACATGTTCAAAGGGAGATTATGAACCACCGATCACTGAAGCATCCAAACATAATCCGGT TCAAGGAGGTCGTGCTAACTCCCACACATTTGGCAATAGTTATGGAATATGCTGCTGGTG GTGAGCTATTTGAAAGGATTTGCAACGCAGGGAGATTCAGTGAGGATGAGGCAAGGTTCT TCTTCCAACAGCTGATTTCTGGAGTGAGCTATTGTCATTCTATGCAAGTATGCCATAGAG ATTTGAAACTCGAAAATACTCTCTTGGATGGCAGTGTCACACCTCGGCTTAAGATTTGTG ATTTTGGTTACTCCAAGTCTTCTGTCCTGCACTCTCAACCGAAATCAACTGTTGGCACAC CGGCTTACATTGCTCCAGAGGTCCTCTCTAGAAAGGAATACGATGGAAAGGTAGCTGATG TTTGGTCATGTGGGGTAACACTCTATGTGATGCTTGTTGGTGCGTATCCTTTTGAGGACC CTGATGACCCAAGGAACTTCCGCAAGACGATCACTAGGATACTCAGTGTACAGTATTCAA TTCCAGACTACGTTCGAGTTTCAGCGGACTGCAGACATCTCCTGTCCCGGATTTTCGTTG GAAATCCTGAGCAGAGGATAACTATCCCAGAGATCAAGAACCACCCATGGTTCCTGAAGA ACCTGCCCATCGAGATGACCGACGAGTACCAGAGGAGCATGCAGCTGGCGGACATGAACA CGCCGTCGCAGAGCCTGGAGGAGGTCATGGCGATCATTCAGGAGGCCCGGAAACCGGGCG ACGCCATGAAGCTCGCCGGCGCCGGGCAGGTCGCCTGCCTGGGGAGCATGGATCTCGACG ACATCGACGATATCGACGACATTGACATCGAGAACAGCGGGGACTTCGTGTGCGCCTTGT GATCGATAGATGCCAAATTCGATCGATCGATCATCAGCTGGTTGAAGACTGAAGTAGCGG GGCAGCGAGCTTTCTTTGTGGCTGATGTGTTGCTGTCATTCATGCCTCGTTTTTACTTCT GGGATCACATATGCTTTGTGACCAAGAGATTGCCATCGCTGTGGATAAATAAGATGAATT TAATTGCAT