Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0389900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:15614227:15621432:1 gene:Os03g0389900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 711, F-box protein 149 description:Cyclin-like F-box domain containing protein. (Os03t0389900-01);Hypothetical conserved gene. (Os03t0389900-02)
Sequence	ATGGCGGCGGGGAACGGCCGGATGGAGGCGGCGCTGGGCTGCCTCGCGGCGCTCCCCGAC GAGGTGCTCTGCGCCGTCGTCGACCTCCTCCCGCCCACCGACGTCGGCCGCCTCGCCTGC GTCAGCAGTGTCATGTACATACTTTGCAATGAGGAGCCTCTCTGGATGAGCAAGTGTCTT TCAGTTGGGGGTCTTCTTGTGTATAGAGGTTCTTGGAAGAAAACAGCATTGTCTAGACTT AATCTTTGTTCAGAAAATGATGAGATTTACCAGAAGCCTCGCCATTTTGATGGGTTCAAT TCCATGCACTTATACAGGAGATGGTACAGATGTTTTACTAATTTGAGTAGCTTTTCCTTT GATAATGGGCACGTTGAAAGGAAAGATGACCTTTCTCTAGACCAATTTCGCGCTCAGTAT GATGGAAAATGTCCAGTTTTGCTTACTAAACTGGCTGAAACCTGGCCAGCAAGGACTAAA TGGACAGCGCAGCAACTGACACATGATTATGGTGAAGTTCCCTTTAGGATATCTCAGAGA AGCCCTCAAAAGATAAAAATGAAACTAAAAGATTATGTTTTTTACATGGAACTCCAGCAT GACGAAGATCCACTTTACATATTTGATGATAAGTTTGGAGAATCAGCACCTACACTATTG GAAGATTACAGTGTCCCTCATCTATTTCAAGAAGATTTCTTTGAAATCATGGATTACGAC CAACGACCAGCTTTCAGATGGCTTATTATTGGACCAGAGAGATCAGGTGCTTCTTGGCAT GTTGATCCAGGGTTGACCAGTGCCTGGAATACTCTTCTTTGTGGCCGAAAAAGGTGGGCA ATGTACCCTCCTGGAAGAGTACCAGGTGGTGTCACAGTACATGTCAGTGATGAAGATGGT GATGTTGACATTGAAACTCCTACATCTTTGCAGTGGTGGCTAGATATCTACCCAAATCTT GCTGAGCATGAGAAACCACTGGAATGCACACAATTACCAGGAGAGACCATATTTGTTCCT AGTGGGTGGTGGCATTGTGTTTTGAACCTTGACATGACAATTGCTGTCACGCAAAATTTT GTCAACCAATCAAATTTTAAGCATGTATGTTTGGACATGGCACCTGGTTACTGTCACAAA GGAGTTTGCCGTGCTGGCTTACTTGCTGCTCCAGACAAATCTATTAGAGATATTGAAAAT CTTCCTAGTATAACGAGTAGATTGAACCACTCTGACATGGCCTGTAAGGAAAAAAGACTG AAAAGTTCAGAGCCTATAAGAACTTCAAATAATGCAAATCAGTGTTCTGCATTTGAGTTC TCAGATGTTCATGAAAACTTGGGGGACCAAGTTTTTTCGTATGATATAGATTTCTTATCC CAATTCCTTGAGAAAGAAAAGGATCACTATTCTTCTGTCTGGAGCCCTACTAATTCAATT GGCCAGAGAGAAGCAAGAGAATGGCTACGTAGGCTATGGGTTCTTAAACCTGAATTGAGA GAACTAATATGGAAGGGTGCATGTCTAGCAATTAATGTAGACAAGTGGTATTCATGCTTA GAGGAAATAAGTGCATGCCATAGTTTACCACCACCTTCTGAAGATGAGAAGCTTCCTGTT GGCACAGGTAGCAACCCAGTCTTCATTGTTTCTGGCAATGTGATCAAAATTTATGCTGAA GGAGGGTTGGGTTATTCTATACATGGTTTGGGCACAGAGCTTGAGTTCTATGATCTTCTG CAAAAACTTGGCTCGCCATTGATCAACCATGTCCCTGAGATCATTGCAAGTGGCTTTCTT GTGTACCTGGATGGTGTCTACAAGACAGTTCCATGGGATGGAAACGGAATACCAGATGTT CTAGCTAAATACTACTCTTTGGAGGTGTCTTATGCAAACGGCTCTTTTCCTCTTGGATTA TGGAGCAAGCAACTGTTTGGATTGAGTAATTCAACTGATGCTCCAGACAGACCAATTTGT CCTTACATGGTTACCAGAAAATGCAAAGGGGATATTTTTGCTCGCATACGTGATAAATTG ACCAAGACTGATGTTTTGAATCTTGCATCATCCTTGGGAGTTCAAATGCGAAATATTCAT CAATTACCCCTTCCACATGTGGAACACATATCCAAATCTGGGAACGAAGATATCAAAGCA AAGGAAAATTCAATTTCTGATGTCACTCATGTTCCGCCTGAATGGAAACAAGTAGTTTCT ACTCTAGACAGGAGAAAGAAAAGTATAAAGAAGCATCTAAGTAACTGGGGTGGTTCAATT CCACAGGTTCTAATTGAGAAGGCTGAAGAATATCTCCCTGACGACATCCGCTTTCTTATC AAGTTTGTTAAGGACGATGATGGTGATTCAGTCTATGTGGTACCTTCTTGGATACATTCA GATATAATGGATGATAACATTCTCATTGAGGGGACCACAGAACCAGGAACTTCCACTGAT TGCATTGCCGTTGAAGATCTGAACAAAATGGATGCAATTCATATCATTGATTTCAGTGAT CTGTCCATTGGGGATCCTCTATGTGACTTAATTCCACTGCACTTGGATGTATTCCGTGGT GATATTGATCTTCTCAGGCAGTTTTTACGAAGCTATCAGCTTCCTTTTCTGAGAGCAGAA TCAAATAAAGATATATACAAGTCAATACAAAATTCTAAATTCAGCAGGGCATCGTATCGT GCGATGTGCTACTGCATACTTCACGAGGACAACGTCCTGGGAGCCATATTTAGCCTGTGG AAGGATCTGGGCACCGCGACGTCATGGGAAGATGTTGAACACTTGGTTTGGGGAGAGCTG AATCAATACCAGCAGTCATGCAGCGTGGGCGAAATTAACTGA

Peptide Sequence

PEP ID	Os03t0389900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:15614227:15621432:1 gene:Os03g0389900 transcript:Os03t0389900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 711, F-box protein 149 description:Cyclin-like F-box domain containing protein. (Os03t0389900-01);Hypothetical conserved gene. (Os03t0389900-02)
Sequence	MAAGNGRMEAALGCLAALPDEVLCAVVDLLPPTDVGRLACVSSVMYILCNEEPLWMSKCL SVGGLLVYRGSWKKTALSRLNLCSENDEIYQKPRHFDGFNSMHLYRRWYRCFTNLSSFSF DNGHVERKDDLSLDQFRAQYDGKCPVLLTKLAETWPARTKWTAQQLTHDYGEVPFRISQR SPQKIKMKLKDYVFYMELQHDEDPLYIFDDKFGESAPTLLEDYSVPHLFQEDFFEIMDYD QRPAFRWLIIGPERSGASWHVDPGLTSAWNTLLCGRKRWAMYPPGRVPGGVTVHVSDEDG DVDIETPTSLQWWLDIYPNLAEHEKPLECTQLPGETIFVPSGWWHCVLNLDMTIAVTQNF VNQSNFKHVCLDMAPGYCHKGVCRAGLLAAPDKSIRDIENLPSITSRLNHSDMACKEKRL KSSEPIRTSNNANQCSAFEFSDVHENLGDQVFSYDIDFLSQFLEKEKDHYSSVWSPTNSI GQREAREWLRRLWVLKPELRELIWKGACLAINVDKWYSCLEEISACHSLPPPSEDEKLPV GTGSNPVFIVSGNVIKIYAEGGLGYSIHGLGTELEFYDLLQKLGSPLINHVPEIIASGFL VYLDGVYKTVPWDGNGIPDVLAKYYSLEVSYANGSFPLGLWSKQLFGLSNSTDAPDRPIC PYMVTRKCKGDIFARIRDKLTKTDVLNLASSLGVQMRNIHQLPLPHVEHISKSGNEDIKA KENSISDVTHVPPEWKQVVSTLDRRKKSIKKHLSNWGGSIPQVLIEKAEEYLPDDIRFLI KFVKDDDGDSVYVVPSWIHSDIMDDNILIEGTTEPGTSTDCIAVEDLNKMDAIHIIDFSD LSIGDPLCDLIPLHLDVFRGDIDLLRQFLRSYQLPFLRAESNKDIYKSIQNSKFSRASYR AMCYCILHEDNVLGAIFSLWKDLGTATSWEDVEHLVWGELNQYQQSCSVGEIN

Transcript Sequence

Transcript ID	Os03t0389900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:15614227:15621432:1 gene:Os03g0389900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 711, F-box protein 149 description:Cyclin-like F-box domain containing protein. (Os03t0389900-01);Hypothetical conserved gene. (Os03t0389900-02)
Sequence	AGCCGCGTGGTCTCCGACTCCCCTCCCCTACCCTACCCACGCCCACCGATCTGATCCACC TCGCCCCTCCCCTCCTCTCCTTGCCCGCCTCGGCCTCCGGGCTCCGGCGATGGCGGCGGG GAACGGCCGGATGGAGGCGGCGCTGGGCTGCCTCGCGGCGCTCCCCGACGAGGTGCTCTG CGCCGTCGTCGACCTCCTCCCGCCCACCGACGTCGGCCGCCTCGCCTGCGTCAGCAGTGT CATGTACATACTTTGCAATGAGGAGCCTCTCTGGATGAGCAAGTGTCTTTCAGTTGGGGG TCTTCTTGTGTATAGAGGTTCTTGGAAGAAAACAGCATTGTCTAGACTTAATCTTTGTTC AGAAAATGATGAGATTTACCAGAAGCCTCGCCATTTTGATGGGTTCAATTCCATGCACTT ATACAGGAGATGGTACAGATGTTTTACTAATTTGAGTAGCTTTTCCTTTGATAATGGGCA CGTTGAAAGGAAAGATGACCTTTCTCTAGACCAATTTCGCGCTCAGTATGATGGAAAATG TCCAGTTTTGCTTACTAAACTGGCTGAAACCTGGCCAGCAAGGACTAAATGGACAGCGCA GCAACTGACACATGATTATGGTGAAGTTCCCTTTAGGATATCTCAGAGAAGCCCTCAAAA GATAAAAATGAAACTAAAAGATTATGTTTTTTACATGGAACTCCAGCATGACGAAGATCC ACTTTACATATTTGATGATAAGTTTGGAGAATCAGCACCTACACTATTGGAAGATTACAG TGTCCCTCATCTATTTCAAGAAGATTTCTTTGAAATCATGGATTACGACCAACGACCAGC TTTCAGATGGCTTATTATTGGACCAGAGAGATCAGGTGCTTCTTGGCATGTTGATCCAGG GTTGACCAGTGCCTGGAATACTCTTCTTTGTGGCCGAAAAAGGTGGGCAATGTACCCTCC TGGAAGAGTACCAGGTGGTGTCACAGTACATGTCAGTGATGAAGATGGTGATGTTGACAT TGAAACTCCTACATCTTTGCAGTGGTGGCTAGATATCTACCCAAATCTTGCTGAGCATGA GAAACCACTGGAATGCACACAATTACCAGGAGAGACCATATTTGTTCCTAGTGGGTGGTG GCATTGTGTTTTGAACCTTGACATGACAATTGCTGTCACGCAAAATTTTGTCAACCAATC AAATTTTAAGCATGTATGTTTGGACATGGCACCTGGTTACTGTCACAAAGGAGTTTGCCG TGCTGGCTTACTTGCTGCTCCAGACAAATCTATTAGAGATATTGAAAATCTTCCTAGTAT AACGAGTAGATTGAACCACTCTGACATGGCCTGTAAGGAAAAAAGACTGAAAAGTTCAGA GCCTATAAGAACTTCAAATAATGCAAATCAGTGTTCTGCATTTGAGTTCTCAGATGTTCA TGAAAACTTGGGGGACCAAGTTTTTTCGTATGATATAGATTTCTTATCCCAATTCCTTGA GAAAGAAAAGGATCACTATTCTTCTGTCTGGAGCCCTACTAATTCAATTGGCCAGAGAGA AGCAAGAGAATGGCTACGTAGGCTATGGGTTCTTAAACCTGAATTGAGAGAACTAATATG GAAGGGTGCATGTCTAGCAATTAATGTAGACAAGTGGTATTCATGCTTAGAGGAAATAAG TGCATGCCATAGTTTACCACCACCTTCTGAAGATGAGAAGCTTCCTGTTGGCACAGGTAG CAACCCAGTCTTCATTGTTTCTGGCAATGTGATCAAAATTTATGCTGAAGGAGGGTTGGG TTATTCTATACATGGTTTGGGCACAGAGCTTGAGTTCTATGATCTTCTGCAAAAACTTGG CTCGCCATTGATCAACCATGTCCCTGAGATCATTGCAAGTGGCTTTCTTGTGTACCTGGA TGGTGTCTACAAGACAGTTCCATGGGATGGAAACGGAATACCAGATGTTCTAGCTAAATA CTACTCTTTGGAGGTGTCTTATGCAAACGGCTCTTTTCCTCTTGGATTATGGAGCAAGCA ACTGTTTGGATTGAGTAATTCAACTGATGCTCCAGACAGACCAATTTGTCCTTACATGGT TACCAGAAAATGCAAAGGGGATATTTTTGCTCGCATACGTGATAAATTGACCAAGACTGA TGTTTTGAATCTTGCATCATCCTTGGGAGTTCAAATGCGAAATATTCATCAATTACCCCT TCCACATGTGGAACACATATCCAAATCTGGGAACGAAGATATCAAAGCAAAGGAAAATTC AATTTCTGATGTCACTCATGTTCCGCCTGAATGGAAACAAGTAGTTTCTACTCTAGACAG GAGAAAGAAAAGTATAAAGAAGCATCTAAGTAACTGGGGTGGTTCAATTCCACAGGTTCT AATTGAGAAGGCTGAAGAATATCTCCCTGACGACATCCGCTTTCTTATCAAGTTTGTTAA GGACGATGATGGTGATTCAGTCTATGTGGTACCTTCTTGGATACATTCAGATATAATGGA TGATAACATTCTCATTGAGGGGACCACAGAACCAGGAACTTCCACTGATTGCATTGCCGT TGAAGATCTGAACAAAATGGATGCAATTCATATCATTGATTTCAGTGATCTGTCCATTGG GGATCCTCTATGTGACTTAATTCCACTGCACTTGGATGTATTCCGTGGTGATATTGATCT TCTCAGGCAGTTTTTACGAAGCTATCAGCTTCCTTTTCTGAGAGCAGAATCAAATAAAGA TATATACAAGTCAATACAAAATTCTAAATTCAGCAGGGCATCGTATCGTGCGATGTGCTA CTGCATACTTCACGAGGACAACGTCCTGGGAGCCATATTTAGCCTGTGGAAGGATCTGGG CACCGCGACGTCATGGGAAGATGTTGAACACTTGGTTTGGGGAGAGCTGAATCAATACCA GCAGTCATGCAGCGTGGGCGAAATTAACTGACGCGATAGAGTTTTCCATACTAAGATAAA GGCACAAGAAATTTGATTTGTAACCTGAAACTGTACCACAAAGTATACCATCGAAACAGT GTATTATGTTACACTAACACATGCTTGATATGCAATAACAACGCATCGAAAGGACAACTT CGTTCAGATGCAACATATT