Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0389700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:15603830:15608696:1 gene:Os03g0389700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 description:3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase, Chorismate biosynthesis (Os03t0389700-01)
Sequence	ATGTCGCTCGCCACCAGCTCCTCGATGGCCGGTGGGGCGGCGGTGGTTCCACGCAGCGCG ACGGCGACGACGGCCTCGGCGTTCGTCACGATGAAGCGGCGCGCCACGGCCGTGCGCGCC GTACACGCGGCGGAGCCGTCGAAGAACCCGCCCGTCGGCGTCCCGTCCGCGGCGAAGACG TCGTCGCCGTCGGTGGCGGCGCCGGAGAAGGCCCCCGTGGCGGCCGCGCCCGCGCCTGTG GCTCCGGCTCCGGCGGCCACGAAGCAGGTGGCGCCGGCGAGGTGGGCGGTGGACAGCTGG AGGACGAAGAAGGCGCTGCAGCTGCCGGAGTACCCCAACGCGGCGGAGCTGGAGGCGGTG CTCAAGACGATCGAGGCGTTCCCGCCGATCGTGTTCGCCGGGGAGGCGAGGCACCTGGAG GAGCGCCTCGCCGACGCCGCCATGGGCCGCGCCTTCCTCCTCCAGGGCGGCGACTGCGCC GAGAGCTTCAAGGAGTTCAACGGCAACAACATCCGCGACACCTTCCGCGTCCTCCTCCAG ATGTCCGCCGTCCTCACCTTCGGCGGCCAAATGCCCGTCATCAAGGTTGGGAGAATGGCG GGGCAATTCGCGAAGCCGAGGTCGGAGGCGTTCGAGGAGAGGGACGGGGTGAAGCTGCCG AGCTACAGGGGCGACAACATCAATGGCGACGCGTTCAACGAGAAGAGCCGCATCCCTGAC CCGCAGAGGATGGTCCGGGCCTATGCGCAGTCCGCCGCCACGCTCAACCTCCTCCGCGCT TTCGCCACCGGAGGATACGCCGCCATGCAGCGCGTGACGCAGTGGAACCTCGATTTCACC CAGCACAGCGAGCAGGGCGACAGGTACCGTGAATTGGCACACAGGGTTGATGAAGCCCTT GGCTTTATGTCTGCTGCTGGGCTAACAGTGGACCACCCGTTGATGACAAGTACTGATTTC TGGACCTCACATGAGTGCCTTCTCCTACCCTATGAACAATCTCTGACCCGTCAGGACTCC ACAACTGGTCATTTCTACGACTGCTCTGCCCACATGCTATGGGTGGGCGAACGCACTCGC CAGCTCGATGGTGCTCATGTTGAGTTCCTCAGGGGTGTGGCCAACCCTCTTGGCATCAAG GTGAGTGACAAAATGAACCCAACCGAGTTGGTGAAGCTGATTGAGATTTTGAACCCATCA AACAAGCCTGGGAGAATTACCATCATCACAAGGATGGGGGCAGAGAACATGAGGGTCAAG TTACCTCATCTTATCCGTGCGGTCCGCCACGCTGGACAAATTGTCACATGGATTACTGAT CCAATGCACGGGAACACCATCAAGGCTCCTTGTGGTCTGAAGACACGCCCCTTTGACTCC ATTCTGGCCGAGGTACGAGCATTCTTCGATGTGCATGATCAAGAAGGAAGCCACCCAGGA GGTGTCCACCTCGAGATGACTGGGCAGAACGTAACCGAGTGCATCGGCGGATCCCGAACC GTCACCTTCGATGACCTGGGTGACCGCTACCACACCCACTGCGACCCGAGGCTGAACGCG TCCCAGTCGCTGGAGCTCTCCTTCATCATCGCCGAGAGGCTGAGGAGGAAGAGGATCCGG TCGTCGAAGCTGAACAACATGTTGCCGTTGCCACCCTTCGGTGTCTGA

Peptide Sequence

PEP ID	Os03t0389700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:15603830:15608696:1 gene:Os03g0389700 transcript:Os03t0389700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 description:3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase, Chorismate biosynthesis (Os03t0389700-01)
Sequence	MSLATSSSMAGGAAVVPRSATATTASAFVTMKRRATAVRAVHAAEPSKNPPVGVPSAAKT SSPSVAAPEKAPVAAAPAPVAPAPAATKQVAPARWAVDSWRTKKALQLPEYPNAAELEAV LKTIEAFPPIVFAGEARHLEERLADAAMGRAFLLQGGDCAESFKEFNGNNIRDTFRVLLQ MSAVLTFGGQMPVIKVGRMAGQFAKPRSEAFEERDGVKLPSYRGDNINGDAFNEKSRIPD PQRMVRAYAQSAATLNLLRAFATGGYAAMQRVTQWNLDFTQHSEQGDRYRELAHRVDEAL GFMSAAGLTVDHPLMTSTDFWTSHECLLLPYEQSLTRQDSTTGHFYDCSAHMLWVGERTR QLDGAHVEFLRGVANPLGIKVSDKMNPTELVKLIEILNPSNKPGRITIITRMGAENMRVK LPHLIRAVRHAGQIVTWITDPMHGNTIKAPCGLKTRPFDSILAEVRAFFDVHDQEGSHPG GVHLEMTGQNVTECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELSFIIAERLRRKRIR SSKLNNMLPLPPFGV

Transcript Sequence

Transcript ID	Os03t0389700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:15603830:15608696:1 gene:Os03g0389700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 description:3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase, Chorismate biosynthesis (Os03t0389700-01)
Sequence	CACCTTCCTCCTCAGGAGACACCACCCGCCGCCGCCGCCTCCTCCATTACCGAGAAGAAG AGAAACCTCTCTTCTACTGTTGGATCCAACTACTACCTACCCGCACGCCGCAATGTCGCT CGCCACCAGCTCCTCGATGGCCGGTGGGGCGGCGGTGGTTCCACGCAGCGCGACGGCGAC GACGGCCTCGGCGTTCGTCACGATGAAGCGGCGCGCCACGGCCGTGCGCGCCGTACACGC GGCGGAGCCGTCGAAGAACCCGCCCGTCGGCGTCCCGTCCGCGGCGAAGACGTCGTCGCC GTCGGTGGCGGCGCCGGAGAAGGCCCCCGTGGCGGCCGCGCCCGCGCCTGTGGCTCCGGC TCCGGCGGCCACGAAGCAGGTGGCGCCGGCGAGGTGGGCGGTGGACAGCTGGAGGACGAA GAAGGCGCTGCAGCTGCCGGAGTACCCCAACGCGGCGGAGCTGGAGGCGGTGCTCAAGAC GATCGAGGCGTTCCCGCCGATCGTGTTCGCCGGGGAGGCGAGGCACCTGGAGGAGCGCCT CGCCGACGCCGCCATGGGCCGCGCCTTCCTCCTCCAGGGCGGCGACTGCGCCGAGAGCTT CAAGGAGTTCAACGGCAACAACATCCGCGACACCTTCCGCGTCCTCCTCCAGATGTCCGC CGTCCTCACCTTCGGCGGCCAAATGCCCGTCATCAAGGTTGGGAGAATGGCGGGGCAATT CGCGAAGCCGAGGTCGGAGGCGTTCGAGGAGAGGGACGGGGTGAAGCTGCCGAGCTACAG GGGCGACAACATCAATGGCGACGCGTTCAACGAGAAGAGCCGCATCCCTGACCCGCAGAG GATGGTCCGGGCCTATGCGCAGTCCGCCGCCACGCTCAACCTCCTCCGCGCTTTCGCCAC CGGAGGATACGCCGCCATGCAGCGCGTGACGCAGTGGAACCTCGATTTCACCCAGCACAG CGAGCAGGGCGACAGGTACCGTGAATTGGCACACAGGGTTGATGAAGCCCTTGGCTTTAT GTCTGCTGCTGGGCTAACAGTGGACCACCCGTTGATGACAAGTACTGATTTCTGGACCTC ACATGAGTGCCTTCTCCTACCCTATGAACAATCTCTGACCCGTCAGGACTCCACAACTGG TCATTTCTACGACTGCTCTGCCCACATGCTATGGGTGGGCGAACGCACTCGCCAGCTCGA TGGTGCTCATGTTGAGTTCCTCAGGGGTGTGGCCAACCCTCTTGGCATCAAGGTGAGTGA CAAAATGAACCCAACCGAGTTGGTGAAGCTGATTGAGATTTTGAACCCATCAAACAAGCC TGGGAGAATTACCATCATCACAAGGATGGGGGCAGAGAACATGAGGGTCAAGTTACCTCA TCTTATCCGTGCGGTCCGCCACGCTGGACAAATTGTCACATGGATTACTGATCCAATGCA CGGGAACACCATCAAGGCTCCTTGTGGTCTGAAGACACGCCCCTTTGACTCCATTCTGGC CGAGGTACGAGCATTCTTCGATGTGCATGATCAAGAAGGAAGCCACCCAGGAGGTGTCCA CCTCGAGATGACTGGGCAGAACGTAACCGAGTGCATCGGCGGATCCCGAACCGTCACCTT CGATGACCTGGGTGACCGCTACCACACCCACTGCGACCCGAGGCTGAACGCGTCCCAGTC GCTGGAGCTCTCCTTCATCATCGCCGAGAGGCTGAGGAGGAAGAGGATCCGGTCGTCGAA GCTGAACAACATGTTGCCGTTGCCACCCTTCGGTGTCTGAATCTGAAATGGGTAAGGGAA ACCAGGGGAAGACGGAGGAATGACGAACGGGGTAGATAAGATAGCTGCAGCAAGAACTCG ACGACGCCTATTCCATTTGTTGGTGGGATGCTCTTGGTGAAATCCTATATTTTGCGAGCT TTTTTTTCTGTTGTAACTTTTCAGTTGGTATATATATGCTCTGTAATATCATGCCAGGCT GAAAGGCTTTGACATTTCGGTTTTTCTATGTTTCTATCATGGATAAGAGAATAAAATGCA AGATAGAAGAAGGCTTTGTG