Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0389501-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:15586221:15587152:-1 gene:Os03g0389501 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Metacaspase 2 description:Similar to LOL3. (Os03t0389501-00)
Sequence	ATGGCGAGCGCGAGGCCGCCGCGGGGGACGGCATGGTGCGGCGGCTGCGGCGCGTACCTG GCCGTGCCGCCGGGGGCGCGCTCGGTGCGGTGCGCGCTCTGCCGCGCCGTGACGCGCGTC GAGCGCCGCGGCCACCACGGCGGCCACGGCGGGGCCCTGGGCTTCATCAAGGGCCTCATC AGCGCGTTCGCCCCGCCGCCGCCGCTGACGCCGTCGGCGGGTGCGGCGGCGGCGGCGAGC TACTACCCGCGCGTCAGCGGCAAGAAGCGCGCGCTCCTCGTCGGCATCAGCTACGCCGCC ACCGGGTACGAGCTCAAGGGCACCGTCAACGACGTCAACTGCATGTCCTTCCTCCTCCGC GAGCGCTTCGCCTTCCCCGCCGACTGCATCCTCGTCCTCACGCAGGAGAACGGCGACCCG TACAGGGTGCCGACGAGGGCGAACCTGCTGGCGGCGATGCGGTGGCTGGTGGAAGGGTGC AGCGCCGGCGACTCGCTGGTGCTCCACTTCTCCGGCCACGGCGTGCAGAAGCTGGACGTC GACGGCGACGAGGCGGACGGCTACGACGAGGCGCTGTGCCCCGTGGACTTCGAGCGGGCG GGGGTCATCCTCGACGACGAGATC

Peptide Sequence

PEP ID	Os03t0389501-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:15586221:15587152:-1 gene:Os03g0389501 transcript:Os03t0389501-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Metacaspase 2 description:Similar to LOL3. (Os03t0389501-00)
Sequence	MASARPPRGTAWCGGCGAYLAVPPGARSVRCALCRAVTRVERRGHHGGHGGALGFIKGLI SAFAPPPPLTPSAGAAAAASYYPRVSGKKRALLVGISYAATGYELKGTVNDVNCMSFLLR ERFAFPADCILVLTQENGDPYRVPTRANLLAAMRWLVEGCSAGDSLVLHFSGHGVQKLDV DGDEADGYDEALCPVDFERAGVILDDEI

Transcript Sequence

Transcript ID	Os03t0389501-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:15586221:15587152:-1 gene:Os03g0389501 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Metacaspase 2 description:Similar to LOL3. (Os03t0389501-00)
Sequence	ACCCAATCTTCTTCCTCACCTTCGCTTTCTCCACACGCAACCGACCACCCCTTCTTCGTC ATCGCCAAGAACATTCTTAGCTGCTGATCACTGTCAAGCTAGATAAGCTAAGCTAAGCTA AGCTAGGCTAGGTGGCTAGGTTAATTAGCTAGGTGTGTAGTACACCCGGCGACACATTTG ATCCACACGTGTACGTAGCCAAGAAGGCAGCAGCTAAGCTAGCGAGCGAGCGCCATGGCG AGCGCGAGGCCGCCGCGGGGGACGGCATGGTGCGGCGGCTGCGGCGCGTACCTGGCCGTG CCGCCGGGGGCGCGCTCGGTGCGGTGCGCGCTCTGCCGCGCCGTGACGCGCGTCGAGCGC CGCGGCCACCACGGCGGCCACGGCGGGGCCCTGGGCTTCATCAAGGGCCTCATCAGCGCG TTCGCCCCGCCGCCGCCGCTGACGCCGTCGGCGGGTGCGGCGGCGGCGGCGAGCTACTAC CCGCGCGTCAGCGGCAAGAAGCGCGCGCTCCTCGTCGGCATCAGCTACGCCGCCACCGGG TACGAGCTCAAGGGCACCGTCAACGACGTCAACTGCATGTCCTTCCTCCTCCGCGAGCGC TTCGCCTTCCCCGCCGACTGCATCCTCGTCCTCACGCAGGAGAACGGCGACCCGTACAGG GTGCCGACGAGGGCGAACCTGCTGGCGGCGATGCGGTGGCTGGTGGAAGGGTGCAGCGCC GGCGACTCGCTGGTGCTCCACTTCTCCGGCCACGGCGTGCAGAAGCTGGACGTCGACGGC GACGAGGCGGACGGCTACGACGAGGCGCTGTGCCCCGTGGACTTCGAGCGGGCGGGGGTC ATCCTCGACGACGAGATC