Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0388900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:15530630:15532454:-1 gene:Os03g0388900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Metacaspase 1 description:Peptidase C14, caspase catalytic domain containing protein. (Os03t0388900-01)
Sequence	ATGGATCACTTCGGCGGACGTGCTCTCGGCTTCGGCGGTGGCGGCGGCTGCGGCGCGGTG CGGTGCAGGCACTGCAGCGCGTCCCTCCCGGCTATGCCTGGCGCCCGCGTCATCCAGTGC GCGCAGTGCTACGGCGTGACGCGCGTCGGCGGCCGCGGCCGGCGCCGCCACCCCAACCCG GTCGAGCCGTGGCGCCCGGCCGTGCCGATGCCCGTGGCCGGCGGCGGCTTCTTCCCGGGC TCCCGCGGCAAGAAGCGCGCCGTCCTGATCGGCATCACGTACGCCGGCATGCGGCGGCGC GGCAGCCAGCTGATGAGGGGCCCCGTCAACGACGTCAAGTGCATGCGGTACCTCCTCTGC GAGCGCTTCGGCTTCCCCAACGACTGCGTCCTCATCCTCACCGACGAGGAGAAGGACCCG TGCAGGTTGGCGACGAAGGAGAACATCAGGATGGCGATGAACTGGCTGGTGCAGGGGTGC AGCTCCGGTGACTCGCTGGTGTTCCACTTCTCCGGGATCGGGGTGCAGGTGCCGGACGAC GACGGCGACGAGGTGGACGGGTACGACGAGGCGATCTGCCCCATGGACTCGTTCAGCCAG GGCCCCATCCTGGACGACGAGATCAACGAGGCCATCGTCCGCCCGCTCGTCCACGGCGCC AAGCTCCACGCCGTCGTCGACGCCGAGCACAGCTCCACCGTCCTCGACCTCCCCTTCCTC TGCTGCCTCTCGTCCAGGTCCGGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGC GCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAAC AACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATC AAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGC ATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGC AAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGAC ATCTACCGCAAGCCGTTCGTCCTGTAA

Peptide Sequence

PEP ID	Os03t0388900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:15530630:15532454:-1 gene:Os03g0388900 transcript:Os03t0388900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Metacaspase 1 description:Peptidase C14, caspase catalytic domain containing protein. (Os03t0388900-01)
Sequence	MDHFGGRALGFGGGGGCGAVRCRHCSASLPAMPGARVIQCAQCYGVTRVGGRGRRRHPNP VEPWRPAVPMPVAGGGFFPGSRGKKRAVLIGITYAGMRRRGSQLMRGPVNDVKCMRYLLC ERFGFPNDCVLILTDEEKDPCRLATKENIRMAMNWLVQGCSSGDSLVFHFSGIGVQVPDD DGDEVDGYDEAICPMDSFSQGPILDDEINEAIVRPLVHGAKLHAVVDAEHSSTVLDLPFL CCLSSRSGGWQWEDHRPPTGAYKGSSGGQAMLFSGCSDGNNKHSLLPEASTVGAMTHSFI KAVECEPRATYGSLLTTMRSIMRDGGVTCNLQGPIGAPIRKVANFSGIQEPNLSCSEMFD IYRKPFVL

Transcript Sequence

Transcript ID	Os03t0388900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:15530630:15532454:-1 gene:Os03g0388900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Metacaspase 1 description:Peptidase C14, caspase catalytic domain containing protein. (Os03t0388900-01)
Sequence	AGCCTGGTGAGATCGCTCGAGACTAACAAGCAAACTAACGTAGTTGCTAGCTAGCTCTAG CTATCTCGGCAATGGATCACTTCGGCGGACGTGCTCTCGGCTTCGGCGGTGGCGGCGGCT GCGGCGCGGTGCGGTGCAGGCACTGCAGCGCGTCCCTCCCGGCTATGCCTGGCGCCCGCG TCATCCAGTGCGCGCAGTGCTACGGCGTGACGCGCGTCGGCGGCCGCGGCCGGCGCCGCC ACCCCAACCCGGTCGAGCCGTGGCGCCCGGCCGTGCCGATGCCCGTGGCCGGCGGCGGCT TCTTCCCGGGCTCCCGCGGCAAGAAGCGCGCCGTCCTGATCGGCATCACGTACGCCGGCA TGCGGCGGCGCGGCAGCCAGCTGATGAGGGGCCCCGTCAACGACGTCAAGTGCATGCGGT ACCTCCTCTGCGAGCGCTTCGGCTTCCCCAACGACTGCGTCCTCATCCTCACCGACGAGG AGAAGGACCCGTGCAGGTTGGCGACGAAGGAGAACATCAGGATGGCGATGAACTGGCTGG TGCAGGGGTGCAGCTCCGGTGACTCGCTGGTGTTCCACTTCTCCGGGATCGGGGTGCAGG TGCCGGACGACGACGGCGACGAGGTGGACGGGTACGACGAGGCGATCTGCCCCATGGACT CGTTCAGCCAGGGCCCCATCCTGGACGACGAGATCAACGAGGCCATCGTCCGCCCGCTCG TCCACGGCGCCAAGCTCCACGCCGTCGTCGACGCCGAGCACAGCTCCACCGTCCTCGACC TCCCCTTCCTCTGCTGCCTCTCGTCCAGGTCCGGCGGCTGGCAGTGGGAGGACCACCGCC CGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCA GCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGC ACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCA CCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCG CCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTG AGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATG GACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAA TCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAA ATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGA AGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTC ACTGTTGTAATAAGGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAA ATGTTTCTGC