Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0387900-03
CDS Infomation

cds chromosome:IRGSP-1.0:3:15467967:15473684:1 gene:Os03g0387900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0387900-01);Conserved hypothetical protein. (Os03t0387900-02);Conserved hypothetical protein. (Os03t0387900-03);Hypothetical conserved gene. (Os03t0387900-04)
Sequence

ATGCCAGATTGGAGGGTGGGCGAGTTTGAAGGTAAGCTCAAGGATGGATTTGCTCGGAGC
AATAATAGCGAACATGAAAATGGAGCCGGGACTGTGAGTATATCCAGCAAGAAGTCGAAG
CATCGGGTTGACAGTGAAAAAAAACCCCATGTTGACATCTCTGGAGTGATTGATTCAGAT
TCGCAGAAATGTAATTCAGAGCAAATCCATTCAGCTAATGGGATAGTATCCCGGGATGTC
AACCATGATCACATAGAAAACTGCAAAGTTGAATCAAATGATTTTCCCTTGAATACTATC
TCTGAAACAAGATATCCAACAGACAATTGGAACAGTTCTCAGTTTGCTCTGAGCAATGAT
GGTTCACCTGTTCTCAATAATCAGAGTACTCCACAAACTGGTCATGGCTATGGAGATAAT
GATCTAACCTACATTGATTGGCCTGCTATTGATAATTTTGAGGACGTCGACAACTTATTC
AGGAGGTGTGATTCCACGTACGGTCAGCAGCAACTTCCGAACACGGATGAACTGTCATGG
ATTCCTTCTTCAGATGCCATGTACTCTTCTGATGTTGCTATGCAACCAGGGTTTGAATCC
TCGTATTCTGATTATGGTATCCTGGATGACCTCTCCGCATTCAATTGTACGGAAGATAAA
TCCCTGACAACAGCTGATCCTTCAAGTGCTGTATGTGACGAGCAATTCGATGACTCTTAT
CTGTTCAATGAGCAAAAACCTGAAGATGTTTATGGCGAACAGGCTTACCAAAGGGATGCG
ATGGAATTGTTGTCCAGCGACCAGATATGCACTGGGCAGGAAAACCTAGATATGATTGGA
AATCGATATTCATCGGAAAATGCCATGGAACAGCCTGAAGATCAGAAGTTTTCTATAGCT
TCAGGTTCTCAACTAAGCTCTTCTCAGAATTTATTGAACCAAAAGAACCACTTGGATTCA
ACTTCACCAAGTAACATAACTTCTGAGTCCTATCCAGAAAGAAATTGCCAGATCATTCCA
TCTGGGGCTTCCTTTGCAGAGAGAAACTTGAAGGTGCAGAAGAAAGTGGCCAGTTCGGCA
TCAGGACAACTTATCAGTGATAATGTGACTGGACATCCTGGTCATCAAACATTGACAAGA
AGGGCTTCATATCCTTGTGAGAATCATGAAATTGGAAAGAGGTCCTTAGGAAAAAGAGGT
TTGGGTCATTCTGATGTTGCAATGGGCACCTCAATGGTAGTTGATGGGTCCTTCGTATCG
TCTATTTCTTCTGATAACTCAGTTGAAGAGAACAGCTTTCGGCAGCTTCAGGATGCAGTT
AGTCAGTTGGATGTGAAAACAAAAATGTGCATTCGAGATGGGTTATACCGCCTGGCAAGA
AGTGCGCAGAATAGGCAAGTCTTCCCAAATACAATGAACAACAATGGAGATAGCCACAAT
GTAAAGGACATGCAAAATGCAGAAACTTCGGGAAAGTTTGTTGATCCTGGGAGCATCGAG
ACACAGACAAATCCAATTGATCGGTCCATAGCTCTGTTGCTTTTCCATCAGCCATCAGAG
CATGTCACTGGAGCTGTTGATGAAGCGGCTTCACTAAAGTCACATAATGATAACCACCAG
GCTGCTGCTAAAAACCAAAGAGTGATGCATGCTTCATCTGTACATTCACCAAGAGGGCAG
GGAGACCCCATGGATGCAAAATCTTGCAGAAACAACTGA

Peptide Sequence

PEP ID

Os03t0387900-03
PEP Infomation

pep chromosome:IRGSP-1.0:3:15467967:15473684:1 gene:Os03g0387900 transcript:Os03t0387900-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0387900-01);Conserved hypothetical protein. (Os03t0387900-02);Conserved hypothetical protein. (Os03t0387900-03);Hypothetical conserved gene. (Os03t0387900-04)
Sequence

MPDWRVGEFEGKLKDGFARSNNSEHENGAGTVSISSKKSKHRVDSEKKPHVDISGVIDSD
SQKCNSEQIHSANGIVSRDVNHDHIENCKVESNDFPLNTISETRYPTDNWNSSQFALSND
GSPVLNNQSTPQTGHGYGDNDLTYIDWPAIDNFEDVDNLFRRCDSTYGQQQLPNTDELSW
IPSSDAMYSSDVAMQPGFESSYSDYGILDDLSAFNCTEDKSLTTADPSSAVCDEQFDDSY
LFNEQKPEDVYGEQAYQRDAMELLSSDQICTGQENLDMIGNRYSSENAMEQPEDQKFSIA
SGSQLSSSQNLLNQKNHLDSTSPSNITSESYPERNCQIIPSGASFAERNLKVQKKVASSA
SGQLISDNVTGHPGHQTLTRRASYPCENHEIGKRSLGKRGLGHSDVAMGTSMVVDGSFVS
SISSDNSVEENSFRQLQDAVSQLDVKTKMCIRDGLYRLARSAQNRQVFPNTMNNNGDSHN
VKDMQNAETSGKFVDPGSIETQTNPIDRSIALLLFHQPSEHVTGAVDEAASLKSHNDNHQ
AAAKNQRVMHASSVHSPRGQGDPMDAKSCRNN

Transcript Sequence

Transcript ID

Os03t0387900-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:15467967:15473684:1 gene:Os03g0387900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0387900-01);Conserved hypothetical protein. (Os03t0387900-02);Conserved hypothetical protein. (Os03t0387900-03);Hypothetical conserved gene. (Os03t0387900-04)
Sequence

AAGGAAATTCGCAGGAGAAATCCCTGGAAGCCTCTAGAGACCGCGCGAACAGGAGACCCC
GAGGAGCAGAGCAGAGCAGAGCAGAGGCGGCGCCAGCTTTGGGAGCTCTCGGATTGATCA
AGAACTGGGGATCCTGAGTTGAATATGATATCAAATCCGGTGAATTGGTACAGTTTCGGT
CCCGGATAGAATTTGTAGTGATGCCAGATTGGAGGGTGGGCGAGTTTGAAGGTAAGCTCA
AGGATGGATTTGCTCGGAGCAATAATAGCGAACATGAAAATGGAGCCGGGACTGTGAGTA
TATCCAGCAAGAAGTCGAAGCATCGGGTTGACAGTGAAAAAAAACCCCATGTTGACATCT
CTGGAGTGATTGATTCAGATTCGCAGAAATGTAATTCAGAGCAAATCCATTCAGCTAATG
GGATAGTATCCCGGGATGTCAACCATGATCACATAGAAAACTGCAAAGTTGAATCAAATG
ATTTTCCCTTGAATACTATCTCTGAAACAAGATATCCAACAGACAATTGGAACAGTTCTC
AGTTTGCTCTGAGCAATGATGGTTCACCTGTTCTCAATAATCAGAGTACTCCACAAACTG
GTCATGGCTATGGAGATAATGATCTAACCTACATTGATTGGCCTGCTATTGATAATTTTG
AGGACGTCGACAACTTATTCAGGAGGTGTGATTCCACGTACGGTCAGCAGCAACTTCCGA
ACACGGATGAACTGTCATGGATTCCTTCTTCAGATGCCATGTACTCTTCTGATGTTGCTA
TGCAACCAGGGTTTGAATCCTCGTATTCTGATTATGGTATCCTGGATGACCTCTCCGCAT
TCAATTGTACGGAAGATAAATCCCTGACAACAGCTGATCCTTCAAGTGCTGTATGTGACG
AGCAATTCGATGACTCTTATCTGTTCAATGAGCAAAAACCTGAAGATGTTTATGGCGAAC
AGGCTTACCAAAGGGATGCGATGGAATTGTTGTCCAGCGACCAGATATGCACTGGGCAGG
AAAACCTAGATATGATTGGAAATCGATATTCATCGGAAAATGCCATGGAACAGCCTGAAG
ATCAGAAGTTTTCTATAGCTTCAGGTTCTCAACTAAGCTCTTCTCAGAATTTATTGAACC
AAAAGAACCACTTGGATTCAACTTCACCAAGTAACATAACTTCTGAGTCCTATCCAGAAA
GAAATTGCCAGATCATTCCATCTGGGGCTTCCTTTGCAGAGAGAAACTTGAAGGTGCAGA
AGAAAGTGGCCAGTTCGGCATCAGGACAACTTATCAGTGATAATGTGACTGGACATCCTG
GTCATCAAACATTGACAAGAAGGGCTTCATATCCTTGTGAGAATCATGAAATTGGAAAGA
GGTCCTTAGGAAAAAGAGGTTTGGGTCATTCTGATGTTGCAATGGGCACCTCAATGGTAG
TTGATGGGTCCTTCGTATCGTCTATTTCTTCTGATAACTCAGTTGAAGAGAACAGCTTTC
GGCAGCTTCAGGATGCAGTTAGTCAGTTGGATGTGAAAACAAAAATGTGCATTCGAGATG
GGTTATACCGCCTGGCAAGAAGTGCGCAGAATAGGCAAGTCTTCCCAAATACAATGAACA
ACAATGGAGATAGCCACAATGTAAAGGACATGCAAAATGCAGAAACTTCGGGAAAGTTTG
TTGATCCTGGGAGCATCGAGACACAGACAAATCCAATTGATCGGTCCATAGCTCTGTTGC
TTTTCCATCAGCCATCAGAGCATGTCACTGGAGCTGTTGATGAAGCGGCTTCACTAAAGT
CACATAATGATAACCACCAGGCTGCTGCTAAAAACCAAAGAGTGATGCATGCTTCATCTG
TACATTCACCAAGAGGGCAGGGAGACCCCATGGATGCAAAATCTTGCAGAAACAACTGAA
GTTATCTCATGAAGCTTCAACAACTGTGACTGTTAATATTGTACTTGTTGCTGCAAACCT
TTCTCCGTTTTGATCCGATCATGCAGTTAGCAGCTGTGTAGTGTGTACTACTACTCTAGT
CGATTAGTCAGGTACAGGCAAACTTGTAACACCAATTTAACAAGTTAGATTGGCTTTTGA
CCATTAGCTTTGTATCTTAATTATTGAGAAGGTCGTCTGTGCCGTGGCCATTCGTGTCTG
TTCTC