Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0383800-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:15214197:15219068:-1 gene:Os03g0383800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAP domain containing protein, expressed. (Os03t0383800-01);Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0383800-02);Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0383800-03)
Sequence

ATGTCATCATACCCTGTGCTAAACAACAGACCTATTGATCAATGGAGAGTTACTGATCTG
AAGGATGAACTTCGTAAGAGGAGGCTCCCTGTTAAAGGCTTGAAAGATGAACTTGTAAGG
CGACTCTTCGAGTCAATTCAGAGTGAAAAAGAAGAAGAAGAAGAAGAACAAGATAATGAA
ACTGTCGAAGTGAATCCAGCAGCTAACCAGGCATCTGAAATACAGAGTGTTTCTCAGGAA
ACTACAGTTTCTATTACAGAAGTTCACAAGGAAACTGTGGTTCAAGTAACTCAGGAAGCT
ACACCTCCTATCACTGAAGTAAGTCAGTCGCTCACAGTTTCAGCTGCCGAAGAGCCCCCC
AAGGTTAACGCGGTGGCAACCCATGAAGCTCCCTTAAGCAAGGCCCCAACAGACAAAGGA
GAAGAGCCACCAATTGCAGGAGATGTTTCCACAGTGGAAAACGAACATCTTCATGCTGAA
AATAATACTGAACCTTTTGTTGAGAAGACACAAGATGTTGGCACCAACGAAGCAATTGGT
GCCCTTGATATGACCAGTGCTGATGTAGAGTCAGACATGACCTCTTCTGATATCAAGATA
GATGCTACTGAAGCCAGCAAAGTTCAACAACATGACACAGTAGCAACAACTGTGGATGCC
ATCCCAACAGATGCTGATCCTATGGATACTGATGTTGCAACTGAGAAGGCGGTTCTTAAT
GATTTGGGTGACACTACTTCAGTGTATGATGAAGAGCGCAAAGATTCTGAGCTCACGAAT
GAGGACGAGAAGCCCATCGCACCAAAACCAAATGATCAGGTACCTGAGGTTAGCCCAGAT
TTAGGGTCTCCAATTAAGTGTGAGTCAATTTCTAGCGATGATATATCAACTAACAAAAAG
AATAATATAAAGGATAATTTGAATGCTAATAATTTTGATTTAGAACTAGAGGCTAAGCCA
GAGATGGTAAAACCATCTTCTGGCATTACTTCCATAGGTGGAGATTTGCAGCCATTGGAT
GATGACAAAGATCTGGGTAAAAACCAGTCATCTTTGGAATACATAGATTCCACAGCTAAT
GTGGATGAAGGCGGCTCTCCAGAGAAACTAAATTTAGACAGGAGTTCAGGTGATGAGTCA
ATGGAGGAGGATGTCATGGAGATTAAGCAAGTTGAGTCCAACATTAAATCTGAAGGAACA
GCTGAGCTTAGCTCAGATCATGTGAAAGAGGTGTCCCTCCCTGATACTGTTGTGGACAAT
TCCTCTGTTGACACGAAAGAAGTTATAGCTGATGAAAAGACAGCAGCTTCAACTGAAAAG
AGGAAACTCGAAGCTGAAGAAACTGTTGCTGCCACTGAGCCAATCAAACGCCAGCGTCGA
TGGGCTGCAGATGGTGCCAAAGTTCCAGAGAGACAACCAATAAGTCATAGTGGCTCTGAT
GCTCCTAAGGAAAATTTTCAGCCTGCTTTAAAACGATCTTTTGGCAGGTCTGATTCAACA
GCTAGTGGAGATTCCCCAAAGGAGCGGGTTGTGCCACCATCTCAGAAACCTGCAACAGCT
TCCTTGAGAATTGATCGATTTGTAAGGCCATTTACGCTGAAGGCTGTGCAAGAACTTCTT
GGTAAAACTGGATCTCTTTGTAGTTTCTGGATGGATCACATCAAGACCCACTGCTATGTT
ACGTTTTCATCAGTAGAGGAAGCTGTGGCTACTCGGGATGCTGTCTACGATTTGCAGTGG
CCACCAAACAACGGCAATCGTTTGGTTGCTGAATTTGTTGATCCCCAGGAAGTGAAGCTC
AAACTTGAACCTCCTCCGCCAGCGGCGGCTCCTATTAGCCCTGCTACTACACCAAAGGAG
CCACCCTTTCAACAGGCTCAGGCTAATCAAAACATGCCTCGTCAAGCCGCTGCACCAAGG
GAGCACTTGCCACCTCCACCGCCTCTTACTACGCTTCCTACATCTGACTCAGGATCAGCA
AAGGAGAGGCTTCCACCCACCCCAAAGAAACAGCCGGAACCTCCTGTTGTGACACTCGAT
GATCTCTTCAGGAAGACACATTCTTCTCCTAGGATTTATTACCTTCCTTTATCAGAAGAG
GAAGTGGCAGCCAAGCTTGCTTCACAGGGCAAAGGCAAGAGAGAATGA

Peptide Sequence

PEP ID

Os03t0383800-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:15214197:15219068:-1 gene:Os03g0383800 transcript:Os03t0383800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAP domain containing protein, expressed. (Os03t0383800-01);Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0383800-02);Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0383800-03)
Sequence

MSSYPVLNNRPIDQWRVTDLKDELRKRRLPVKGLKDELVRRLFESIQSEKEEEEEEQDNE
TVEVNPAANQASEIQSVSQETTVSITEVHKETVVQVTQEATPPITEVSQSLTVSAAEEPP
KVNAVATHEAPLSKAPTDKGEEPPIAGDVSTVENEHLHAENNTEPFVEKTQDVGTNEAIG
ALDMTSADVESDMTSSDIKIDATEASKVQQHDTVATTVDAIPTDADPMDTDVATEKAVLN
DLGDTTSVYDEERKDSELTNEDEKPIAPKPNDQVPEVSPDLGSPIKCESISSDDISTNKK
NNIKDNLNANNFDLELEAKPEMVKPSSGITSIGGDLQPLDDDKDLGKNQSSLEYIDSTAN
VDEGGSPEKLNLDRSSGDESMEEDVMEIKQVESNIKSEGTAELSSDHVKEVSLPDTVVDN
SSVDTKEVIADEKTAASTEKRKLEAEETVAATEPIKRQRRWAADGAKVPERQPISHSGSD
APKENFQPALKRSFGRSDSTASGDSPKERVVPPSQKPATASLRIDRFVRPFTLKAVQELL
GKTGSLCSFWMDHIKTHCYVTFSSVEEAVATRDAVYDLQWPPNNGNRLVAEFVDPQEVKL
KLEPPPPAAAPISPATTPKEPPFQQAQANQNMPRQAAAPREHLPPPPPLTTLPTSDSGSA
KERLPPTPKKQPEPPVVTLDDLFRKTHSSPRIYYLPLSEEEVAAKLASQGKGKRE

Transcript Sequence

Transcript ID

Os03t0383800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:15214197:15219068:-1 gene:Os03g0383800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAP domain containing protein, expressed. (Os03t0383800-01);Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0383800-02);Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0383800-03)
Sequence

CCCCCGCACCACACGCGCCCCGTACCCCGCACATCCACCTCCTCTCTCTCCTCCCTCCGC
GCCGCGCGCCCCCAAACCCTAGAACTCCACGCACGCGACGCGAGCTCCAATCCCACCCGG
TGTTCCCCCCCTCCCCCTGATTCGCCTGCAACCACCACTCCCCTCTCCAATCTAATCCTC
TTCCGGCTGTGCCGTCCTCCTGCTCCGCTTCCCTTTTTTCCGCGAGATTTTGTTCTGTTT
GGGGGAGAAACTTTTTTTGGGTGCTTTTTTTTTTCTTTGGTTGTGTTGTTTCAGGAGCGC
GCGTGGCCTCGGAGGATTCGCGGCGGCTGGGTTTTGGCGCTTCCGTGAAGGGTCGTGCCC
CTCCCGTCTCCGACGTCCGATCTCTGTGCGCCGGGGTTGTCAGCTACAATGTCATCATAC
CCTGTGCTAAACAACAGACCTATTGATCAATGGAGAGTTACTGATCTGAAGGATGAACTT
CGTAAGAGGAGGCTCCCTGTTAAAGGCTTGAAAGATGAACTTGTAAGGCGACTCTTCGAG
TCAATTCAGAGTGAAAAAGAAGAAGAAGAAGAAGAACAAGATAATGAAACTGTCGAAGTG
AATCCAGCAGCTAACCAGGCATCTGAAATACAGAGTGTTTCTCAGGAAACTACAGTTTCT
ATTACAGAAGTTCACAAGGAAACTGTGGTTCAAGTAACTCAGGAAGCTACACCTCCTATC
ACTGAAGTAAGTCAGTCGCTCACAGTTTCAGCTGCCGAAGAGCCCCCCAAGGTTAACGCG
GTGGCAACCCATGAAGCTCCCTTAAGCAAGGCCCCAACAGACAAAGGAGAAGAGCCACCA
ATTGCAGGAGATGTTTCCACAGTGGAAAACGAACATCTTCATGCTGAAAATAATACTGAA
CCTTTTGTTGAGAAGACACAAGATGTTGGCACCAACGAAGCAATTGGTGCCCTTGATATG
ACCAGTGCTGATGTAGAGTCAGACATGACCTCTTCTGATATCAAGATAGATGCTACTGAA
GCCAGCAAAGTTCAACAACATGACACAGTAGCAACAACTGTGGATGCCATCCCAACAGAT
GCTGATCCTATGGATACTGATGTTGCAACTGAGAAGGCGGTTCTTAATGATTTGGGTGAC
ACTACTTCAGTGTATGATGAAGAGCGCAAAGATTCTGAGCTCACGAATGAGGACGAGAAG
CCCATCGCACCAAAACCAAATGATCAGGTACCTGAGGTTAGCCCAGATTTAGGGTCTCCA
ATTAAGTGTGAGTCAATTTCTAGCGATGATATATCAACTAACAAAAAGAATAATATAAAG
GATAATTTGAATGCTAATAATTTTGATTTAGAACTAGAGGCTAAGCCAGAGATGGTAAAA
CCATCTTCTGGCATTACTTCCATAGGTGGAGATTTGCAGCCATTGGATGATGACAAAGAT
CTGGGTAAAAACCAGTCATCTTTGGAATACATAGATTCCACAGCTAATGTGGATGAAGGC
GGCTCTCCAGAGAAACTAAATTTAGACAGGAGTTCAGGTGATGAGTCAATGGAGGAGGAT
GTCATGGAGATTAAGCAAGTTGAGTCCAACATTAAATCTGAAGGAACAGCTGAGCTTAGC
TCAGATCATGTGAAAGAGGTGTCCCTCCCTGATACTGTTGTGGACAATTCCTCTGTTGAC
ACGAAAGAAGTTATAGCTGATGAAAAGACAGCAGCTTCAACTGAAAAGAGGAAACTCGAA
GCTGAAGAAACTGTTGCTGCCACTGAGCCAATCAAACGCCAGCGTCGATGGGCTGCAGAT
GGTGCCAAAGTTCCAGAGAGACAACCAATAAGTCATAGTGGCTCTGATGCTCCTAAGGAA
AATTTTCAGCCTGCTTTAAAACGATCTTTTGGCAGGTCTGATTCAACAGCTAGTGGAGAT
TCCCCAAAGGAGCGGGTTGTGCCACCATCTCAGAAACCTGCAACAGCTTCCTTGAGAATT
GATCGATTTGTAAGGCCATTTACGCTGAAGGCTGTGCAAGAACTTCTTGGTAAAACTGGA
TCTCTTTGTAGTTTCTGGATGGATCACATCAAGACCCACTGCTATGTTACGTTTTCATCA
GTAGAGGAAGCTGTGGCTACTCGGGATGCTGTCTACGATTTGCAGTGGCCACCAAACAAC
GGCAATCGTTTGGTTGCTGAATTTGTTGATCCCCAGGAAGTGAAGCTCAAACTTGAACCT
CCTCCGCCAGCGGCGGCTCCTATTAGCCCTGCTACTACACCAAAGGAGCCACCCTTTCAA
CAGGCTCAGGCTAATCAAAACATGCCTCGTCAAGCCGCTGCACCAAGGGAGCACTTGCCA
CCTCCACCGCCTCTTACTACGCTTCCTACATCTGACTCAGGATCAGCAAAGGAGAGGCTT
CCACCCACCCCAAAGAAACAGCCGGAACCTCCTGTTGTGACACTCGATGATCTCTTCAGG
AAGACACATTCTTCTCCTAGGATTTATTACCTTCCTTTATCAGAAGAGGAAGTGGCAGCC
AAGCTTGCTTCACAGGGCAAAGGCAAGAGAGAATGAGGAGCTGTAGCCTCTTTTTTTCTT
GTCGCTAGTATGGGGGCATGTGGAGGTATGTAGTGGTTACATACTTGCATGTGTACGCTG
CAGGTTGTAGGGCTGAGAGCCTGAGATCTTTCTTCCTAACTTTCCAGGAAAAATGGTGTA
TTACAGCTCAGCAGCTGGCTCTTGCAGTTCATTTGAAATAACAGGAGGCGGCGACTGCTG
TTAGGTATTTTGCTGCAAGAGAGAGTAGCTGTAGGCTAGTGTAGAAGCAGCAAATGTATT
TTCTACAGAAGGAATGTTTTTTGTTCTATCACTGTCTAGTGTGTTGCGTCTAACTCTTGT
TACTTGGAACGTCTGACGTCTGAGATTATGGTTGGTTTAAACAATCGGGTATGGTTGCGA
CTTGTGACTCCTGTTATAATTTAATTGCGAGGATATTTATTGTCACATTGGCCATTTTGC
TTGGTAAATTCTCACCTGTATGGG