Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0380700-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:15076021:15076626:1 gene:Os03g0380700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein. (Os03t0380700-00)
Sequence

ATGGAGACGGAGGAGGACGACCATCGCCTGCACCCCCGCACGCGCACCATCGCCGACCTG
CTCAACCAGCTCGACCAGATCCACTCCACCTCGGCGACAAGAACCACCGGCGGCGGCGGC
GGCGTGGCGCCTGCCTCGGACGAGGCGATCGAGGCGCTCAAGGACGTCACCGGCGACATC
GATCAGCTACCGGCGGAGTGCGCGATCTGCCTCCACGGTGGCCTGGACGCGGCGGCGGCG
CCCGCGGGGTGGAAGGAGATGCCGTGCGGGCACCGGTTCCACGGCGGGTGCCTGGAGAAG
TGGCTGCGCGCGCACGGCACCTGCCCCATGTGCCGCCACCAGATGCCGACCACTACCGCG
CCGCCGCCGCCTGCAGCCGAGCAGGAGGATTATCTGGATGGTGATGAGGAGGAGGACGCC
GGCGACGACGACGAGGTGGAGGCTGGTGTGGGGCCGCTGCCGTTGGAGTTGCGAGTGGTG
GTAGCGCACTCGAGCGGCGGCTATGGAGGAGTGGCGGCGTCGGCTTCGACTACGAGGCGG
CTCCTTGCATGGAGCACGACAATCTAA

Peptide Sequence

PEP ID

Os03t0380700-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:15076021:15076626:1 gene:Os03g0380700 transcript:Os03t0380700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein. (Os03t0380700-00)
Sequence

METEEDDHRLHPRTRTIADLLNQLDQIHSTSATRTTGGGGGVAPASDEAIEALKDVTGDI
DQLPAECAICLHGGLDAAAAPAGWKEMPCGHRFHGGCLEKWLRAHGTCPMCRHQMPTTTA
PPPPAAEQEDYLDGDEEEDAGDDDEVEAGVGPLPLELRVVVAHSSGGYGGVAASASTTRR
LLAWSTTI

Transcript Sequence

Transcript ID

Os03t0380700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:15076021:15076626:1 gene:Os03g0380700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein. (Os03t0380700-00)
Sequence

ACCACGACGACCACGACGAGCGCCACCGGCACGCCGGCCATGGAGACGGAGGAGGACGAC
CATCGCCTGCACCCCCGCACGCGCACCATCGCCGACCTGCTCAACCAGCTCGACCAGATC
CACTCCACCTCGGCGACAAGAACCACCGGCGGCGGCGGCGGCGTGGCGCCTGCCTCGGAC
GAGGCGATCGAGGCGCTCAAGGACGTCACCGGCGACATCGATCAGCTACCGGCGGAGTGC
GCGATCTGCCTCCACGGTGGCCTGGACGCGGCGGCGGCGCCCGCGGGGTGGAAGGAGATG
CCGTGCGGGCACCGGTTCCACGGCGGGTGCCTGGAGAAGTGGCTGCGCGCGCACGGCACC
TGCCCCATGTGCCGCCACCAGATGCCGACCACTACCGCGCCGCCGCCGCCTGCAGCCGAG
CAGGAGGATTATCTGGATGGTGATGAGGAGGAGGACGCCGGCGACGACGACGAGGTGGAG
GCTGGTGTGGGGCCGCTGCCGTTGGAGTTGCGAGTGGTGGTAGCGCACTCGAGCGGCGGC
TATGGAGGAGTGGCGGCGTCGGCTTCGACTACGAGGCGGCTCCTTGCATGGAGCACGACA
ATCTAA