Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0379300-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:15000100:15002140:1 gene:Os03g0379300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 063 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0379300-01);Helix-loop-helix DNA-binding domain containing protein. (Os03t0379300-02)
Sequence	ATGGTGCCGTCGGAGAGGGGGGACGTCGCCACCGCCATCAGACCCGCCGCTGCCGACAAG CTCGTCCATGGGCCTATCTCTGACAAGAAGTGCCGGAAGAAGGTCCCGAGGAAGGTTCAC AAATCTGAGAGGGAGAAGCTTAAACGCGGGCATCTCAATGATCTGTTCGGCGAGCTGGGT AATATGCTAGAAGCGGATAGGCAGAGTAATGGGAAGGCATGCATACTAACTGACACCACC CGGATCTTAAGAGATCTGCTTTCTCAAGTAAAATCTCTCCGGCAAGAAAACAGCACCCTC CAGAATGAATCTAATTATGTTACGATGGAAAGGAATGAGTTGCAGGATGAAAATGGTGCG CTACGCAGCGAAATCTCTGACCTCCAAAACGAGCTGAGGATGCGTGCGACAGGGAGTCCA GGTTGGGGCCATGGCGCGACTGGATCACCTCTCCCCGTTCCTCCCTCTCCAGGCACGGTT TTCCCATCGCAGCAGCCAATGCAGCCATCTCCCATGACAACAAGCACAGTGTTCCCCTTG CAGCAGCCACTGCCACAACCAACAGTCATTGAGCCCTCTGCAAGACAGCCACTGGAACTG AAGCTCTTCCTAGAAGCACCCCCCGCCGAAGACCCTGAACCATCAGAAGACCAGGAGGCT CCGAACAATGTGGCACGACCGCAGCCGAGGTACCCAACAGAGGCATCTTCTTGGCCTATT AGCCTGGGACTTCCAAGAATGGAAGATGAGCAAATGTAG

Peptide Sequence

PEP ID	Os03t0379300-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:15000100:15002140:1 gene:Os03g0379300 transcript:Os03t0379300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 063 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0379300-01);Helix-loop-helix DNA-binding domain containing protein. (Os03t0379300-02)
Sequence	MVPSERGDVATAIRPAAADKLVHGPISDKKCRKKVPRKVHKSEREKLKRGHLNDLFGELG NMLEADRQSNGKACILTDTTRILRDLLSQVKSLRQENSTLQNESNYVTMERNELQDENGA LRSEISDLQNELRMRATGSPGWGHGATGSPLPVPPSPGTVFPSQQPMQPSPMTTSTVFPL QQPLPQPTVIEPSARQPLELKLFLEAPPAEDPEPSEDQEAPNNVARPQPRYPTEASSWPI SLGLPRMEDEQM

Transcript Sequence

Transcript ID	Os03t0379300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:15000100:15002140:1 gene:Os03g0379300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 063 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0379300-01);Helix-loop-helix DNA-binding domain containing protein. (Os03t0379300-02)
Sequence	AATCTTCGCCCTCCTCCTCCTCCTCGTACGCGCCCACGCGGTTCTCTTTCTGCCCCCTCG ATCGATTTGAGGGAACGGAAGGGGGAGGTTTTTGGAGGAGGCCATGGTGCCGTCGGAGAG GGGGGACGTCGCCACCGCCATCAGACCCGCCGCTGCCGACAAGCTCGTCCATGGGCCTAT CTCTGACAAGAAGTGCCGGAAGAAGGTCCCGAGGAAGGTTCACAAATCTGAGAGGGAGAA GCTTAAACGCGGGCATCTCAATGATCTGTTCGGCGAGCTGGGTAATATGCTAGAAGCGGA TAGGCAGAGTAATGGGAAGGCATGCATACTAACTGACACCACCCGGATCTTAAGAGATCT GCTTTCTCAAGTAAAATCTCTCCGGCAAGAAAACAGCACCCTCCAGAATGAATCTAATTA TGTTACGATGGAAAGGAATGAGTTGCAGGATGAAAATGGTGCGCTACGCAGCGAAATCTC TGACCTCCAAAACGAGCTGAGGATGCGTGCGACAGGGAGTCCAGGTTGGGGCCATGGCGC GACTGGATCACCTCTCCCCGTTCCTCCCTCTCCAGGCACGGTTTTCCCATCGCAGCAGCC AATGCAGCCATCTCCCATGACAACAAGCACAGTGTTCCCCTTGCAGCAGCCACTGCCACA ACCAACAGTCATTGAGCCCTCTGCAAGACAGCCACTGGAACTGAAGCTCTTCCTAGAAGC ACCCCCCGCCGAAGACCCTGAACCATCAGAAGACCAGGAGGCTCCGAACAATGTGGCACG ACCGCAGCCGAGGTACCCAACAGAGGCATCTTCTTGGCCTATTAGCCTGGGACTTCCAAG AATGGAAGATGAGCAAATGTAGTGGTAGCACGATAGATGATAGCACAGGTAGAGATTGAG AGGGTCTGTTTTTAATGCATGCAGGAATTCCACACGAAAACACTTCTGTCCTTGCATGAA AACTGGAAAATTTCCTGCATTCCAAGTAAGACCTGAGTAGATCAGCTCCAACCAATCAGA AACTCACTTTGAGCCTAGAGGATATACTACTGAATGATGTGCATGTAAATATTTCAATCT CCCTTTTGTTTCTGTAAACTCTAGTGAGAATAGAACCCGTTTTATCCCCTTGC