Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0379100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:14993014:14997377:1 gene:Os03g0379100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF248, methyltransferase putative family protein. (Os03t0379100-01)
Sequence	ATGGCGCGGAGTTCAACTGAGAGCAGGACCAGGACCACTGTATCTGTAGTTGTTTTATTT GGCCTTTGTTCCTTCTTCTATCTCTTGGGTGTGTGGCAGAGAAGTGGTTTCGGAAGAGGA GACAGCATAGCAGCTGTGGTGAACGAACAGACTAAATGCGTGGTTCTTCCAAACCTGAAT TTTGAAACCCATCATAGTGCTTCAGACCTTCCTAATGATACTGGGAGTACTGAGGTTAAA ACTTTCGAGCCATGTGATGCACAGTACACAGATTACACTCCCTGTGAGGAGCAAAAGCGT GCAATGACCTTCCCTAGGGATAATATGATATATCGGGAGAGGCATTGCCCACCTGAAAAG GATAAGCTCTATTGTCTGGTTCCAGCACCAAAGGGTTATGCTGCTCCTTTTCATTGGCCA AAGAGCCGTGATTATGTTCATTATGCAAATATCCCTCACAAGAGCCTCACGGTTGAGAAG GCTATCCAGAATTGGGTTCACTACGAGGGTAAAGTGTTCAGGTTTCCTGGTGGTGGAACA CAGTTTCCTCAGGGTGCAGACAAGTATATAGACCATCTTGCTTCTGTTATCCCAATAGCC AATGGGAAAGTGAGAACAGCACTCGACACTGGTTGTGGGGTTGCTAGTCTAGGTGCTTAC CTGTTGAAGAAAAATGTTTTGACCATGTCATTTGCACCAAGGGATAATCATGAGGCTCAA GTACAGTTTGCACTGGAGAGAGGTGTTCCCGCATATATAGGTGTTCTCGGATCAATGAAA CTGTCATTCCCATCACGTGTCTTTGACATGGCCCACTGCTCAAGGTGTTTAATTCCATGG AGTGGAAATGATGGAATGTACATGATGGAAGTTGATAGGGTACTAAGGCCTGGAGGGTAT TGGGTACTCTCAGGCCCACCAATTGGCTGGAAGATTCACTATAAGGGATGGCAACGAACA AAGGATGATCTTCAAAGTGAGCAGAGAAGAATAGAACAATTTGCAGAACTTCTTTGTTGG AATAAGATTTCTGAGAAGGATGGTATTGCTATATGGAGAAAGAGAATAAACGACAAATCC TGCCCCATGAAACAAGAAAATCCAAAAGTTGACAAGTGTGAGTTGGCATATGACAATGAT GTATGGTATAAGAAAATGGAGGTCTGTGTAACTCCCCTTCCCGAGGTTAAAACCATGACA GAGGTTGCTGGTGGTCAATTAGAGCCATTTCCCCAGAGACTCAATGCAGTACCTCCCAGG ATTACCCATGGTTTTGTACCTGGGTTCTCAGTCCAGTCATATCAAGATGACAATAAACTT TGGCAGAAACATATTAACGCTTACAAAAAGATCAATAACTTGCTTGATACTGGAAGATAC CGTAACATAATGGACATGAATGCTGGCCTTGGTAGTTTTGCTGCTGCATTGGAGTCCACG AAGCTGTGGGTCATGAATGTTGTTCCAACCATTGCAGATACTTCTACATTAGGTGTAATC TACGAGCGGGGATTAATAGGAATGTATCATGATTGGTGTGAAGGATTTTCTACATATCCA AGGACATATGATCTCATACATGCTAACGCTGTGTTCAGCTTATATGAGAATAAGTGTAAA TTTGAAGATATACTATTGGAAATGGACCGGATCTTACGACCAGAGGGCGCAGTTATAATC CGTGACAAGGTTGATGTTCTTGTAAAGGTGGAGAAAATAGCTAACGCCATGAGGTGGCAG ACAAGATTGACTGATCATGAGGGTGGCCCTCATGTGCCTGAGAAGATACTCTTTGCGGTT AAACAATACTGGGTTGTTGAAAGCAAGAGCAGCTAA

Peptide Sequence

PEP ID	Os03t0379100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:14993014:14997377:1 gene:Os03g0379100 transcript:Os03t0379100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF248, methyltransferase putative family protein. (Os03t0379100-01)
Sequence	MARSSTESRTRTTVSVVVLFGLCSFFYLLGVWQRSGFGRGDSIAAVVNEQTKCVVLPNLN FETHHSASDLPNDTGSTEVKTFEPCDAQYTDYTPCEEQKRAMTFPRDNMIYRERHCPPEK DKLYCLVPAPKGYAAPFHWPKSRDYVHYANIPHKSLTVEKAIQNWVHYEGKVFRFPGGGT QFPQGADKYIDHLASVIPIANGKVRTALDTGCGVASLGAYLLKKNVLTMSFAPRDNHEAQ VQFALERGVPAYIGVLGSMKLSFPSRVFDMAHCSRCLIPWSGNDGMYMMEVDRVLRPGGY WVLSGPPIGWKIHYKGWQRTKDDLQSEQRRIEQFAELLCWNKISEKDGIAIWRKRINDKS CPMKQENPKVDKCELAYDNDVWYKKMEVCVTPLPEVKTMTEVAGGQLEPFPQRLNAVPPR ITHGFVPGFSVQSYQDDNKLWQKHINAYKKINNLLDTGRYRNIMDMNAGLGSFAAALEST KLWVMNVVPTIADTSTLGVIYERGLIGMYHDWCEGFSTYPRTYDLIHANAVFSLYENKCK FEDILLEMDRILRPEGAVIIRDKVDVLVKVEKIANAMRWQTRLTDHEGGPHVPEKILFAV KQYWVVESKSS

Transcript Sequence

Transcript ID	Os03t0379100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:14993014:14997377:1 gene:Os03g0379100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF248, methyltransferase putative family protein. (Os03t0379100-01)
Sequence	TCGATCCTGGGGGGTCTGAGCTAATGCGCGCCGCCCCGATCTCCCGATCCGGTCCGCGCG CGCTCGATCCCCGCGCCTGATTTCTCCTCCCCGCCCGTCGCCGAGGAGAGCTCCGTCCAG TGAGGTATGGCGCGGAGTTCAACTGAGAGCAGGACCAGGACCACTGTATCTGTAGTTGTT TTATTTGGCCTTTGTTCCTTCTTCTATCTCTTGGGTGTGTGGCAGAGAAGTGGTTTCGGA AGAGGAGACAGCATAGCAGCTGTGGTGAACGAACAGACTAAATGCGTGGTTCTTCCAAAC CTGAATTTTGAAACCCATCATAGTGCTTCAGACCTTCCTAATGATACTGGGAGTACTGAG GTTAAAACTTTCGAGCCATGTGATGCACAGTACACAGATTACACTCCCTGTGAGGAGCAA AAGCGTGCAATGACCTTCCCTAGGGATAATATGATATATCGGGAGAGGCATTGCCCACCT GAAAAGGATAAGCTCTATTGTCTGGTTCCAGCACCAAAGGGTTATGCTGCTCCTTTTCAT TGGCCAAAGAGCCGTGATTATGTTCATTATGCAAATATCCCTCACAAGAGCCTCACGGTT GAGAAGGCTATCCAGAATTGGGTTCACTACGAGGGTAAAGTGTTCAGGTTTCCTGGTGGT GGAACACAGTTTCCTCAGGGTGCAGACAAGTATATAGACCATCTTGCTTCTGTTATCCCA ATAGCCAATGGGAAAGTGAGAACAGCACTCGACACTGGTTGTGGGGTTGCTAGTCTAGGT GCTTACCTGTTGAAGAAAAATGTTTTGACCATGTCATTTGCACCAAGGGATAATCATGAG GCTCAAGTACAGTTTGCACTGGAGAGAGGTGTTCCCGCATATATAGGTGTTCTCGGATCA ATGAAACTGTCATTCCCATCACGTGTCTTTGACATGGCCCACTGCTCAAGGTGTTTAATT CCATGGAGTGGAAATGATGGAATGTACATGATGGAAGTTGATAGGGTACTAAGGCCTGGA GGGTATTGGGTACTCTCAGGCCCACCAATTGGCTGGAAGATTCACTATAAGGGATGGCAA CGAACAAAGGATGATCTTCAAAGTGAGCAGAGAAGAATAGAACAATTTGCAGAACTTCTT TGTTGGAATAAGATTTCTGAGAAGGATGGTATTGCTATATGGAGAAAGAGAATAAACGAC AAATCCTGCCCCATGAAACAAGAAAATCCAAAAGTTGACAAGTGTGAGTTGGCATATGAC AATGATGTATGGTATAAGAAAATGGAGGTCTGTGTAACTCCCCTTCCCGAGGTTAAAACC ATGACAGAGGTTGCTGGTGGTCAATTAGAGCCATTTCCCCAGAGACTCAATGCAGTACCT CCCAGGATTACCCATGGTTTTGTACCTGGGTTCTCAGTCCAGTCATATCAAGATGACAAT AAACTTTGGCAGAAACATATTAACGCTTACAAAAAGATCAATAACTTGCTTGATACTGGA AGATACCGTAACATAATGGACATGAATGCTGGCCTTGGTAGTTTTGCTGCTGCATTGGAG TCCACGAAGCTGTGGGTCATGAATGTTGTTCCAACCATTGCAGATACTTCTACATTAGGT GTAATCTACGAGCGGGGATTAATAGGAATGTATCATGATTGGTGTGAAGGATTTTCTACA TATCCAAGGACATATGATCTCATACATGCTAACGCTGTGTTCAGCTTATATGAGAATAAG TGTAAATTTGAAGATATACTATTGGAAATGGACCGGATCTTACGACCAGAGGGCGCAGTT ATAATCCGTGACAAGGTTGATGTTCTTGTAAAGGTGGAGAAAATAGCTAACGCCATGAGG TGGCAGACAAGATTGACTGATCATGAGGGTGGCCCTCATGTGCCTGAGAAGATACTCTTT GCGGTTAAACAATACTGGGTTGTTGAAAGCAAGAGCAGCTAATTACATATGCTGGGTTGT TTTTTTCCACTGAGCTCCCAACAAGACCTAAGACATGACTTAATTACATATGAAGGGTAT GCATCATCTACCTCCTCTGTAAACTTATAGCCACTGTAGTCAGGAATGAACTCTTGGCAG CTTGAGTTTTCCGAAAAGTTAGCACCCTTGCAATGTGGCCTTGCCAGTTCTTTTCAAGGT AAATTGCACTGCAGGTATAAATCTTTTTCAAAACCGGCTGCCTCAGTCTTGACAATCTCA ACCACAGGTTTCATCTTTTGATGTAAATGGCTTGGATTTGAAAGTTCATGTATGCAAGGC TTGTCATGACCGTATTTCTTTTAGCCAGTTTTGTCTAGCCTTAGCTGGTGCGACAATTTG AGAATGCTCAAACTGGCCTCTAATCTTGCTTGTTTGGTGCATTTGTGCTCTAAGGAGGTG TCGCACTGTAATGAAACTGAGATCCATAAGATTCTAGTATTCTGATCGTCTGAACCGAGG TGACCAATAATCAAATTTAGCTACGTATGTAATAGTTTTTTTTCTGTTGGTAACAGACGA ACGATTTATTTTTAGTGCT