Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0377700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:14926417:14930396:-1 gene:Os03g0377700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE A5 description:Cellulose synthase-like A5. (Os03t0377700-01)
Sequence	ATGGAGGCCGGCGAGGCAGCCGGCGCCGTCCTCTTCCTCCTCGCCGCCGCCGTCTCCCTC CTCGCCGCCGTCTCCACCGGCGCCCTCGACTTCACCTACCTCGTCACAGTCGTCGGCGAG GGATCGTCGACGTCGCCGGGGAGCGGCGGCGGCGCGTGGTGGCGCGAGGCGTGGGTGGGG GCGCGGTCGCGCGCGGTGGCGCCGGCGCTGCAGGTCGGGGTGTGGGCGTGCATGGTGATG TCGGTGATGCTGGTGGTGGAGGCCACCTACAACTCCGCCGTCAGCGTCGCCGCCAGGCTC GTCGGCTGGAGGCCGGAGCGGTGGTTCAAGTGGGAGCCCCTCGGCGGCGGCGCCGGCGCC GGCGACGAGGAGAAGGGGGAGGCTGCTGCTGCTGCTTATCCCATGGTCATGGTCCAGATA CCCATGTATAATGAGCTCGAGGTGTACAAGTTGTCAATCGGAGCAGTTTGTGGGCTCAAG TGGCCAAAGGAGAGGTTGATAATCCAAGTTTTGGATGATTCCACGGACGCATTTATCAAG AATTTGGTTGAGCTGGAATGTGAGGATTGGGCAAGCAAAGGTCTAAACATTAAGTATGCC ACCAGAAGTGGCCGCAAAGGGTTCAAAGCAGGAGCCTTGAAGAAGGGAATGGAGTGGGAC TATGCCAAGCAATGCGAATATGTTGCCATATTTGATGCTGATTTCCAGCCAGAACCGGAT TTCCTTCTCAGAACTGTCCCGTTCCTCATGCACAATCAGAATGTTGCGCTTGTACAAGCT CGGTGGGTTTTTGTGAATGACAGAGTAAGCCTACTGACAAGGATACAGAAGACATTCCTT GATTACCACTTCAAAGCTGAGCAGGAGGCAGGATCGGCTACATTTGCTTTCTTCAGTTTC AATGGGACCGCTGGTGTATGGCGCACAGAAGCTATCAATGACGCAGGAGGTTGGAAGGAT CGAACTACAGTTGAAGACATGGACTTGGCTGTCCGAGCAACCTTAAAGGGATGGAAATTC ATCTATTTAGGGGACCTCAGAGTAAAGAGTGAGCTTCCATCCACTTATAAAGCATACTGC CGACAACAGTTCCGGTGGTCTTGTGGCGGTGCAAACTTGTTCCGAAAGATGATATGGGAT GTCTTGGTTGCCAAGAAAGTGTCATCCTTGAAGAAGATCTACATACTGTATAGCTTCTTC CTGGTGAGGAGAGTTGTTGCCCCTGCTGTTGCCTTTATTCTCTACAATGTTATCATCCCT GTGTCGGTCATGATCCCAGAGCTCTTCCTGCCAATCTGGGGCGTTGCCTACATTCCTACA GCACTCCTGATTGTCACTGCCATAAGAAATCCAGAAAATCTGCACACAGTGCCACTGTGG ATTTTATTCGAGAGCGTCATGTCCATGCATCGGTTGAGAGCTGCTGTAGCTGGTCTGCTG CAACTGCAAGAATTCAACCAATGGATTGTGACGAAGAAAGTGGGGAACAATGCCTTCGAC GAGAATAATGAGACTCCATTGCTTCAAAAATCCAGGAAAAGGTTAATAAACAGAGTGAAT CTACCTGAGATCGGATTATCGGTGTTCCTCATCTTTTGTGCATCCTACAACCTTGTCTTC CATGGAAAGAACAGCTTCTACATAAATCTCTATCTCCAAGGATTAGCCTTCTTTCTTCTG GGGCTGAATTGCGTTGGCACTCTACCTGATCATTGCTGCTTCTGA

Peptide Sequence

PEP ID	Os03t0377700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:14926417:14930396:-1 gene:Os03g0377700 transcript:Os03t0377700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE A5 description:Cellulose synthase-like A5. (Os03t0377700-01)
Sequence	MEAGEAAGAVLFLLAAAVSLLAAVSTGALDFTYLVTVVGEGSSTSPGSGGGAWWREAWVG ARSRAVAPALQVGVWACMVMSVMLVVEATYNSAVSVAARLVGWRPERWFKWEPLGGGAGA GDEEKGEAAAAAYPMVMVQIPMYNELEVYKLSIGAVCGLKWPKERLIIQVLDDSTDAFIK NLVELECEDWASKGLNIKYATRSGRKGFKAGALKKGMEWDYAKQCEYVAIFDADFQPEPD FLLRTVPFLMHNQNVALVQARWVFVNDRVSLLTRIQKTFLDYHFKAEQEAGSATFAFFSF NGTAGVWRTEAINDAGGWKDRTTVEDMDLAVRATLKGWKFIYLGDLRVKSELPSTYKAYC RQQFRWSCGGANLFRKMIWDVLVAKKVSSLKKIYILYSFFLVRRVVAPAVAFILYNVIIP VSVMIPELFLPIWGVAYIPTALLIVTAIRNPENLHTVPLWILFESVMSMHRLRAAVAGLL QLQEFNQWIVTKKVGNNAFDENNETPLLQKSRKRLINRVNLPEIGLSVFLIFCASYNLVF HGKNSFYINLYLQGLAFFLLGLNCVGTLPDHCCF

Transcript Sequence

Transcript ID	Os03t0377700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:14926417:14930396:-1 gene:Os03g0377700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE A5 description:Cellulose synthase-like A5. (Os03t0377700-01)
Sequence	AGCCTCCGTTGTACATCACTCTCCTCTCCTCTCTCTCTCCAGAGGCCACGGCAGCCGCCA CCGCCCGGAGAAACAATGGAGGCCGGCGAGGCAGCCGGCGCCGTCCTCTTCCTCCTCGCC GCCGCCGTCTCCCTCCTCGCCGCCGTCTCCACCGGCGCCCTCGACTTCACCTACCTCGTC ACAGTCGTCGGCGAGGGATCGTCGACGTCGCCGGGGAGCGGCGGCGGCGCGTGGTGGCGC GAGGCGTGGGTGGGGGCGCGGTCGCGCGCGGTGGCGCCGGCGCTGCAGGTCGGGGTGTGG GCGTGCATGGTGATGTCGGTGATGCTGGTGGTGGAGGCCACCTACAACTCCGCCGTCAGC GTCGCCGCCAGGCTCGTCGGCTGGAGGCCGGAGCGGTGGTTCAAGTGGGAGCCCCTCGGC GGCGGCGCCGGCGCCGGCGACGAGGAGAAGGGGGAGGCTGCTGCTGCTGCTTATCCCATG GTCATGGTCCAGATACCCATGTATAATGAGCTCGAGGTGTACAAGTTGTCAATCGGAGCA GTTTGTGGGCTCAAGTGGCCAAAGGAGAGGTTGATAATCCAAGTTTTGGATGATTCCACG GACGCATTTATCAAGAATTTGGTTGAGCTGGAATGTGAGGATTGGGCAAGCAAAGGTCTA AACATTAAGTATGCCACCAGAAGTGGCCGCAAAGGGTTCAAAGCAGGAGCCTTGAAGAAG GGAATGGAGTGGGACTATGCCAAGCAATGCGAATATGTTGCCATATTTGATGCTGATTTC CAGCCAGAACCGGATTTCCTTCTCAGAACTGTCCCGTTCCTCATGCACAATCAGAATGTT GCGCTTGTACAAGCTCGGTGGGTTTTTGTGAATGACAGAGTAAGCCTACTGACAAGGATA CAGAAGACATTCCTTGATTACCACTTCAAAGCTGAGCAGGAGGCAGGATCGGCTACATTT GCTTTCTTCAGTTTCAATGGGACCGCTGGTGTATGGCGCACAGAAGCTATCAATGACGCA GGAGGTTGGAAGGATCGAACTACAGTTGAAGACATGGACTTGGCTGTCCGAGCAACCTTA AAGGGATGGAAATTCATCTATTTAGGGGACCTCAGAGTAAAGAGTGAGCTTCCATCCACT TATAAAGCATACTGCCGACAACAGTTCCGGTGGTCTTGTGGCGGTGCAAACTTGTTCCGA AAGATGATATGGGATGTCTTGGTTGCCAAGAAAGTGTCATCCTTGAAGAAGATCTACATA CTGTATAGCTTCTTCCTGGTGAGGAGAGTTGTTGCCCCTGCTGTTGCCTTTATTCTCTAC AATGTTATCATCCCTGTGTCGGTCATGATCCCAGAGCTCTTCCTGCCAATCTGGGGCGTT GCCTACATTCCTACAGCACTCCTGATTGTCACTGCCATAAGAAATCCAGAAAATCTGCAC ACAGTGCCACTGTGGATTTTATTCGAGAGCGTCATGTCCATGCATCGGTTGAGAGCTGCT GTAGCTGGTCTGCTGCAACTGCAAGAATTCAACCAATGGATTGTGACGAAGAAAGTGGGG AACAATGCCTTCGACGAGAATAATGAGACTCCATTGCTTCAAAAATCCAGGAAAAGGTTA ATAAACAGAGTGAATCTACCTGAGATCGGATTATCGGTGTTCCTCATCTTTTGTGCATCC TACAACCTTGTCTTCCATGGAAAGAACAGCTTCTACATAAATCTCTATCTCCAAGGATTA GCCTTCTTTCTTCTGGGGCTGAATTGCGTTGGCACTCTACCTGATCATTGCTGCTTCTGA CAAATCAAGTCAAATCTGCTGCCGTTTCATCAATCTGATATGTGATTCTTTTCTGTGTTT AAATTTCTCCAGAAAGCATTTTTAAATTGTAGAGTACGTCACAGTTTATGTTGACCTGTA GTATTTTGCATAGTTACAAAAGGTCAAAAATGTCAATAACAATCCAGTATATATCAACAA ATTCACAGGTCTGCCTTTTTGC