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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0377600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:14925199:14926082:-1 gene:Os03g0377600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0377600-01)
Sequence

ATGTCGCTCACCAATGCTCCCTCGTCGATGGTGTCGATCGTGACGCCGGTGACGGACAGG
GACAGCGGGCGGACGGTGGCGGGCGTGCCGCCGGTGCTCGTCGGGGCGTCCGTCTCGTCG
GCGCCGGAGCTGCGGGGGCGGGCGTACCTGGTGCACCACGTCTTCTACGAGGACGGCAGC
GCCAGCGCCGACGGTGGCGGCGGCGTGGCCCCGGCGTCCAGGGCATCGATCGCGGCGCTG
AGGGAGGTCGAGGAGGAGGATGACGACGGCGAGGAGGCGTCCGACTGCGCGATCTGCCTC
GACGACGGGGAGGAGTCCAGGGAGACGTGCGGGAGCGGGAGGAGGAAGGAGATGCCGTGC
GGGCACCGGTTCCACGGCGAGTGCGTGGAGCGGTGGCTGGGGATCCACGGCAGCTGCCCG
CTGTGCCGGCACGAGATGCCGCCGGCGACGGCGGCGGAGGCGGAGGAGGAGGAGGTGGTG
GTGGCGATGGTGCATGGGGAGAGGGTGGTGATGAGGGGGAGGCGCGTGGTGCTGAGCGTG
CTGGTCATGGGCCGGGCCCACGATGACGGCGAGGGCCCGGAGCAACGCGGCACGGATCCG
ATTCCTCCTCTTCCGCGTGTGCTCATAGATGATGTGGATTAA

Peptide Sequence

PEP ID

Os03t0377600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:14925199:14926082:-1 gene:Os03g0377600 transcript:Os03t0377600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0377600-01)
Sequence

MSLTNAPSSMVSIVTPVTDRDSGRTVAGVPPVLVGASVSSAPELRGRAYLVHHVFYEDGS
ASADGGGGVAPASRASIAALREVEEEDDDGEEASDCAICLDDGEESRETCGSGRRKEMPC
GHRFHGECVERWLGIHGSCPLCRHEMPPATAAEAEEEEVVVAMVHGERVVMRGRRVVLSV
LVMGRAHDDGEGPEQRGTDPIPPLPRVLIDDVD

Transcript Sequence

Transcript ID

Os03t0377600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:14925199:14926082:-1 gene:Os03g0377600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0377600-01)
Sequence

CAAAAAAGAAAAAAAAGGCTCACCTACCTCGAACCCTTTGGCGCCATGCGCATCATCAAC
CCAATCCACCGATCATCGAGAAGGCGTCTTTTCCTCCTCTATATCAAATCGAGCGAGAAC
GATAGCGAGAGCGAGGCAGATGGTAGCAAAAGCATCGCGAAGAATTATTAAGAGGAAATT
GAAGAGATCGGGTAATGTCGCTCACCAATGCTCCCTCGTCGATGGTGTCGATCGTGACGC
CGGTGACGGACAGGGACAGCGGGCGGACGGTGGCGGGCGTGCCGCCGGTGCTCGTCGGGG
CGTCCGTCTCGTCGGCGCCGGAGCTGCGGGGGCGGGCGTACCTGGTGCACCACGTCTTCT
ACGAGGACGGCAGCGCCAGCGCCGACGGTGGCGGCGGCGTGGCCCCGGCGTCCAGGGCAT
CGATCGCGGCGCTGAGGGAGGTCGAGGAGGAGGATGACGACGGCGAGGAGGCGTCCGACT
GCGCGATCTGCCTCGACGACGGGGAGGAGTCCAGGGAGACGTGCGGGAGCGGGAGGAGGA
AGGAGATGCCGTGCGGGCACCGGTTCCACGGCGAGTGCGTGGAGCGGTGGCTGGGGATCC
ACGGCAGCTGCCCGCTGTGCCGGCACGAGATGCCGCCGGCGACGGCGGCGGAGGCGGAGG
AGGAGGAGGTGGTGGTGGCGATGGTGCATGGGGAGAGGGTGGTGATGAGGGGGAGGCGCG
TGGTGCTGAGCGTGCTGGTCATGGGCCGGGCCCACGATGACGGCGAGGGCCCGGAGCAAC
GCGGCACGGATCCGATTCCTCCTCTTCCGCGTGTGCTCATAGATGATGTGGATTAATTAA
TAACTCCTCTCAAATTTAAGAAAGGGTGATCTGGATTAACTAGG