Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0377500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:14916538:14924273:1 gene:Os03g0377500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear control of ATP synthase 2 domain containing protein. (Os03t0377500-01);Nuclear control of ATP synthase 2 domain containing protein. (Os03t0377500-02)
Sequence	CTGACTAGACTCAAGAGCAATGGGAGTCCAGTCCCGCACCTTTTGCACTCTGCTTCTGAT ATGGTCTCAACAAAACTTGCTGTCCTGACAAGTATGCAACACTGCTTGGCTGCTTTTCTT GCTGAGGTTTACTTTGAAGTTGATAAGTGCAGAAAAGGACTAACAGAAAGTTCAGATAAA TCGCTACATACTCTATTCATTGTTCTGAATTCTGTCTTCTCCAAATTGGAGGTATCATTT AGAAATGCTGTTGAGGGACAAACTCTATTATGCACACATGATGGGAAGTCGCCTGAACTT ATCTTTGAAAGATTGCCAGAAGTTGATGTTGAGAGTTCAGAGTGGACAGAGGTGTTATCA GCAAATGCTATAACATTGATCTACCAAAACCTCCAGAAGTTCGATGATTTTATTTCTGAT CAGTTTTCGAACCACAAAAGACCAAGAAATACGACCATATATTGGTTGCCCTACACATGT GGAGCATTGGGCCTCTCTGCATGTTCTTTATGGCTTTTGCGCCACAGTAGCTTGATGGGA AGTTCTGACATTGACAACTGGATTCAAGATGCAAAAGAATCGATGGTTGGTTTTTGGGAT GTGCATGTTGGGCAACCAATCATTTCCATCAGGGATGAACTTTTTGAGACATTCAAACAA AGATCTAAACATGAAATGGAAAAACAAGAGGTCCAACAAACTGAAGAATCATTGCGCAGG ATGTTGCTTGACTTTTGTGGGAACACTTCAAATGAAAAACCGCCACAAGATATGTCAGAG CTAGCAATGATGGAGATTGTCATGAAGAGATATGAGAAGGAAGCAATGCATCCATTTAAA GGTCTTTCCAGTGGAAAATTAACATGTGCATTGTCTATTCAGATTGAGAAGCATAAACTG GCTCTTCTGGAGGCAATGCTGGAGCTGGACCAGATCCTTAGGGCAAATGAGATAAACTTT GCTATTCTTGCAGCACTACCTGCATTTGGTGTTTCACTTCTGCTGCTCTTTGCAGTTCGA GCATGGGCTACACATGGCCGTGGTGCTGAGGGAAGAGGTAGGACTGCACGGCGTCAGCGA AGGCTGCTTCTTGCTGATGTAGAGAAAAGGCTTATGGAGTTTCAGAATTGCATGGCTAAT GGAATGGAGGAAGAGGCATGCTGTAAGTTCGGGTTAACACTGTACACCCTTGATAGACTA TACAAAGCTGTTGAATCGCAGGCGAGAGAAACAGGAGAGTGGTCAAGCTTGAGAGAAGAC ATGTTTGATCTGGCAAAGCCTGGTGTGGGCATGGAAGACAAGCTGGTTCTGCTGTCCCGG CTCAAAGGGATGTACGACTGCTTACTTCCATCACCGTCAGGTGTCTTGCCCCGTCTGTAG

Peptide Sequence

PEP ID	Os03t0377500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:14916538:14924273:1 gene:Os03g0377500 transcript:Os03t0377500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear control of ATP synthase 2 domain containing protein. (Os03t0377500-01);Nuclear control of ATP synthase 2 domain containing protein. (Os03t0377500-02)
Sequence	LTRLKSNGSPVPHLLHSASDMVSTKLAVLTSMQHCLAAFLAEVYFEVDKCRKGLTESSDK SLHTLFIVLNSVFSKLEVSFRNAVEGQTLLCTHDGKSPELIFERLPEVDVESSEWTEVLS ANAITLIYQNLQKFDDFISDQFSNHKRPRNTTIYWLPYTCGALGLSACSLWLLRHSSLMG SSDIDNWIQDAKESMVGFWDVHVGQPIISIRDELFETFKQRSKHEMEKQEVQQTEESLRR MLLDFCGNTSNEKPPQDMSELAMMEIVMKRYEKEAMHPFKGLSSGKLTCALSIQIEKHKL ALLEAMLELDQILRANEINFAILAALPAFGVSLLLLFAVRAWATHGRGAEGRGRTARRQR RLLLADVEKRLMEFQNCMANGMEEEACCKFGLTLYTLDRLYKAVESQARETGEWSSLRED MFDLAKPGVGMEDKLVLLSRLKGMYDCLLPSPSGVLPRL

Transcript Sequence

Transcript ID	Os03t0377500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:14916538:14924273:1 gene:Os03g0377500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear control of ATP synthase 2 domain containing protein. (Os03t0377500-01);Nuclear control of ATP synthase 2 domain containing protein. (Os03t0377500-02)
Sequence	ACTGACTAGACTCAAGAGCAATGGGAGTCCAGTCCCGCACCTTTTGCACTCTGCTTCTGA TATGGTCTCAACAAAACTTGCTGTCCTGACAAGTATGCAACACTGCTTGGCTGCTTTTCT TGCTGAGGTTTACTTTGAAGTTGATAAGTGCAGAAAAGGACTAACAGAAAGTTCAGATAA ATCGCTACATACTCTATTCATTGTTCTGAATTCTGTCTTCTCCAAATTGGAGGTATCATT TAGAAATGCTGTTGAGGGACAAACTCTATTATGCACACATGATGGGAAGTCGCCTGAACT TATCTTTGAAAGATTGCCAGAAGTTGATGTTGAGAGTTCAGAGTGGACAGAGGTGTTATC AGCAAATGCTATAACATTGATCTACCAAAACCTCCAGAAGTTCGATGATTTTATTTCTGA TCAGTTTTCGAACCACAAAAGACCAAGAAATACGACCATATATTGGTTGCCCTACACATG TGGAGCATTGGGCCTCTCTGCATGTTCTTTATGGCTTTTGCGCCACAGTAGCTTGATGGG AAGTTCTGACATTGACAACTGGATTCAAGATGCAAAAGAATCGATGGTTGGTTTTTGGGA TGTGCATGTTGGGCAACCAATCATTTCCATCAGGGATGAACTTTTTGAGACATTCAAACA AAGATCTAAACATGAAATGGAAAAACAAGAGGTCCAACAAACTGAAGAATCATTGCGCAG GATGTTGCTTGACTTTTGTGGGAACACTTCAAATGAAAAACCGCCACAAGATATGTCAGA GCTAGCAATGATGGAGATTGTCATGAAGAGATATGAGAAGGAAGCAATGCATCCATTTAA AGGTCTTTCCAGTGGAAAATTAACATGTGCATTGTCTATTCAGATTGAGAAGCATAAACT GGCTCTTCTGGAGGCAATGCTGGAGCTGGACCAGATCCTTAGGGCAAATGAGATAAACTT TGCTATTCTTGCAGCACTACCTGCATTTGGTGTTTCACTTCTGCTGCTCTTTGCAGTTCG AGCATGGGCTACACATGGCCGTGGTGCTGAGGGAAGAGGTAGGACTGCACGGCGTCAGCG AAGGCTGCTTCTTGCTGATGTAGAGAAAAGGCTTATGGAGTTTCAGAATTGCATGGCTAA TGGAATGGAGGAAGAGGCATGCTGTAAGTTCGGGTTAACACTGTACACCCTTGATAGACT ATACAAAGCTGTTGAATCGCAGGCGAGAGAAACAGGAGAGTGGTCAAGCTTGAGAGAAGA CATGTTTGATCTGGCAAAGCCTGGTGTGGGCATGGAAGACAAGCTGGTTCTGCTGTCCCG GCTCAAAGGGATGTACGACTGCTTACTTCCATCACCGTCAGGTGTCTTGCCCCGTCTGTA GTCTTCTCATCTTCCTTTCCTTTCCTTTTCTTCTTTTCTTTTTGGTCACGTGTGACGATT AGTGAACCCCAATCTTAGACGACATGAATTTGCTTGGCGTTTTAAGAGTCGTCAAATTTT GAATTTTTTATGCCCCGGGTACTTTGATTGTAGCCCTTTCGGCTCCATGGAGTGATGATG GCTTTTGTGCTGCTGCAATGTTTGCACCAGAGATTACTGACTGTAAATCCAAAATCTCTT CTAACTGGATGCTTAATTCATGTGCCACACCCATTTTACATTTGTTTCT