Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0376000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:14843823:14847345:-1 gene:Os03g0376000 gene_biotype:protein_coding transcript_biotype:protein_coding description:emp24/gp25L/p24 family protein. (Os03t0376000-01)
Sequence

ATGGCCGCGCGATCCCTCCACCACCTCCTCCTCCTCCTCTTCCTCGCCGGCTTCCACTCC
CTCTCCCTCTCCCCCGCCGCCGCACTGCGGTTCGACCTGCAGTCGGGCCACACCAAGTGC
ATCTCCGACGACATCAAGGTGGGCGCCATGGCGGTGGGCAAGTACCACGTCGTGGTGCCC
GAGGGGGGCGGCTCCACCTCCTCCTCCTCCTCGTCGTCGTCGTCGGCGCAGCCGCTGCTC
CCGGAGTCCCACCGCGTCTCATTGCGGGTCACGTCACCCTACGGCAACAGCCTGCACTAC
TCGGAGAACGTGCAGTCGGGCAACTTCGCCTTCACGGCGTCCGAGGCCGGGGACTACCTC
GCCTGCTTCTGGGCGCCCGACCACCGCCCCACCGCCACCGTCGGCTTCGAGTTCGACTGG
CGCAGCGGCGTCTCCGCCAGGGACTGGACCAACGTCGCCAAGAAGGGCCAGGTCGATATG
ATGGAGGTTGAGCTCAAGAAGCTGGAGGATACTATCAACTCTATCCATGAAGAAATGTTT
TATCTTCGCGCAAGGGAGGAGGAGATGCAGGAACTGAACAGGAGAACAAACTCAAGGATG
GCTTGGCTTGGTTTCTTCTCACTAGCTATCTGCCTGTCAGTGGCGGGGTTGCAGTTGTGG
CATCTGAAGAACTTCTTTGAGAGAAAGAAGCTTCTATAA

Peptide Sequence

PEP ID

Os03t0376000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:14843823:14847345:-1 gene:Os03g0376000 transcript:Os03t0376000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:emp24/gp25L/p24 family protein. (Os03t0376000-01)
Sequence

MAARSLHHLLLLLFLAGFHSLSLSPAAALRFDLQSGHTKCISDDIKVGAMAVGKYHVVVP
EGGGSTSSSSSSSSSAQPLLPESHRVSLRVTSPYGNSLHYSENVQSGNFAFTASEAGDYL
ACFWAPDHRPTATVGFEFDWRSGVSARDWTNVAKKGQVDMMEVELKKLEDTINSIHEEMF
YLRAREEEMQELNRRTNSRMAWLGFFSLAICLSVAGLQLWHLKNFFERKKLL

Transcript Sequence

Transcript ID

Os03t0376000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:14843823:14847345:-1 gene:Os03g0376000 gene_biotype:protein_coding transcript_biotype:protein_coding description:emp24/gp25L/p24 family protein. (Os03t0376000-01)
Sequence

GTAGATAGTTACACAAACCGAGAAGGTAAGAAGGAGGTAAAATAGACTCCGTTCCGTTCC
GTTGCCTGGACACGCCTCGCCTCCTCGTCTCCTGGAACAACGAAACAGGCGAACGCCGCG
TCGCCCTCTCCGATCTCTCCCCGCCTCCGCCATGGCCGCGCGATCCCTCCACCACCTCCT
CCTCCTCCTCTTCCTCGCCGGCTTCCACTCCCTCTCCCTCTCCCCCGCCGCCGCACTGCG
GTTCGACCTGCAGTCGGGCCACACCAAGTGCATCTCCGACGACATCAAGGTGGGCGCCAT
GGCGGTGGGCAAGTACCACGTCGTGGTGCCCGAGGGGGGCGGCTCCACCTCCTCCTCCTC
CTCGTCGTCGTCGTCGGCGCAGCCGCTGCTCCCGGAGTCCCACCGCGTCTCATTGCGGGT
CACGTCACCCTACGGCAACAGCCTGCACTACTCGGAGAACGTGCAGTCGGGCAACTTCGC
CTTCACGGCGTCCGAGGCCGGGGACTACCTCGCCTGCTTCTGGGCGCCCGACCACCGCCC
CACCGCCACCGTCGGCTTCGAGTTCGACTGGCGCAGCGGCGTCTCCGCCAGGGACTGGAC
CAACGTCGCCAAGAAGGGCCAGGTCGATATGATGGAGGTTGAGCTCAAGAAGCTGGAGGA
TACTATCAACTCTATCCATGAAGAAATGTTTTATCTTCGCGCAAGGGAGGAGGAGATGCA
GGAACTGAACAGGAGAACAAACTCAAGGATGGCTTGGCTTGGTTTCTTCTCACTAGCTAT
CTGCCTGTCAGTGGCGGGGTTGCAGTTGTGGCATCTGAAGAACTTCTTTGAGAGAAAGAA
GCTTCTATAATTCTGACTCAGAACATTTAGGCATAAAATTGTGTGATTTCTCTTTTTATG
CTTACCAGGCGTAAATTTCCTGCAAGGGACAGATGTTAGCATAGTTGAGGAACATTTCTT
TTCAGTTTCCTAGACCAACTTAAATAGATGTAAAATGCAAAGACGACACCAATTTTTGTT
TCCTTGCTTGCAAAGTATGTTGTTTTCATGGTTCAAAAGAC