Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0372700-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:14670795:14674931:1 gene:Os03g0372700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to low temperature viability protein. (Os03t0372700-01);Low temperature viability protein family protein. (Os03t0372700-02)
Sequence	ATGGGAGGAGGAGGAGGAGGAGGGCGCAAGCCACGCAACTTCGCCACGTTCCGGCTGTTC CCGCGCGCCGGCGCCGCCGACCCCAACGACCGCGTCTTCGTCCGCGTCGACAGCAACGAC TACACCGTCCCCGGCTTCGGCGACGACGACGCCTTCGACTCCTCATCCCTCTCCCTCACC GGTGACGCCGCCGCCGGCGATCACTTCTCCTCCGCCTCCGGCCCCCTCCCCGACCACGTC CGCCGCGAGATCCTCGAGCTCGGCCTCCCGGACGACGGCTACAATTACCTCCACCACCTC CGCGAGCTCCGCCCCTCCGCCGCCGCCGCCGCCTCATCCTTCGCGCCCAACCAGACTGCC CCGCCTCTCCCCCTCGACGTGAAGGCGTATGATGCCAGTAGGGTGCGGATTGCTTCTGGC AATGTTGAGGATGAGATGGACGAGGGGAGGACGATGTGTAAGGTGGCCGCGAAGACAGCG CCTGTGAGGCGGATTGAGAGGGCGGTTGATCCTGACATCGCGAGGTTGCTCGACGAGACC GATGTCTCCCATGGCGGGTCGGAGGATGAGGGACTGGAGGAGGATTTTGTCATCATGGCA AACCGGGCTGAGGGGGATGAGGAGGAAGATGATGATGATGAAGAGGAGGAAGTGATGGAT GGTGTGTTCTTAAGTGATGTTGAAGAGGAAGAGGAGTTTGAGGATGATGAGGGTGAGCCC AAGCCGAGGGTCCGGCGGTTGCTGGATGAACAGTTTGATTTGCTTGCTTTGGAAGAATAT GGTGACAGTGATGATGATGATGATGATCCAGGTGTTAGAAATGGGGAATGTGAACTGCCT ACTGAGGTTATTGATGAACTGAAACTGTTCCATAGTCAAAATGTATCTGTCACAGAAGAA TATAGAACGCCGGCAGATTTTGTTCGTAGAAAATTGGATTCAAGCACAGCAGAGGAGGTG GATGAATCTGCTAATGTAATCCAAAAATGTGCTGAATATGCTGAAAGGTATTTAAATGAA ACTGCTGAAGAGGAAGAAGTTGTACTTGTTTCAGAAAGCAGTGATGAGTCTGAAGTTTGG GACTGTGAGACTATTGTTTCCACATACTCAAATCTTGACAACCATCCTGGAAAGATTCAA ACACCAGGAAATCCTAAAAATAGGCTCCCTAAAGTTTTTCCTGGAGAAACAGCTACAACG AAAGATATCATCAGGCTTCAAGGCAAAGAGAGACTTCCAGTAGAATACCTACCACAGAGG AAAAGAAATGGTGAGAAGGAGAAGAAAGCAAAGCCAACAGAAACTCCAAGTGCTGAAAGT TTTAAGAAAGGAGCTCAAAAGGAAACAAAGGAGGAAAAGAAAGCAAGAAAGGCTGCAGTG AAAGAAGAGAAGAGAGAAGCACGGAAAGCAAAGAAAGAGCTGAAAGGCCTGTACAAATTT GAAACACAGAAGGCTCAGAAGGTTGCTGCTGTTACAGGGCCAGCTTCTATACGGCTAATG TAA

Peptide Sequence

PEP ID	Os03t0372700-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:14670795:14674931:1 gene:Os03g0372700 transcript:Os03t0372700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to low temperature viability protein. (Os03t0372700-01);Low temperature viability protein family protein. (Os03t0372700-02)
Sequence	MGGGGGGGRKPRNFATFRLFPRAGAADPNDRVFVRVDSNDYTVPGFGDDDAFDSSSLSLT GDAAAGDHFSSASGPLPDHVRREILELGLPDDGYNYLHHLRELRPSAAAAASSFAPNQTA PPLPLDVKAYDASRVRIASGNVEDEMDEGRTMCKVAAKTAPVRRIERAVDPDIARLLDET DVSHGGSEDEGLEEDFVIMANRAEGDEEEDDDDEEEEVMDGVFLSDVEEEEEFEDDEGEP KPRVRRLLDEQFDLLALEEYGDSDDDDDDPGVRNGECELPTEVIDELKLFHSQNVSVTEE YRTPADFVRRKLDSSTAEEVDESANVIQKCAEYAERYLNETAEEEEVVLVSESSDESEVW DCETIVSTYSNLDNHPGKIQTPGNPKNRLPKVFPGETATTKDIIRLQGKERLPVEYLPQR KRNGEKEKKAKPTETPSAESFKKGAQKETKEEKKARKAAVKEEKREARKAKKELKGLYKF ETQKAQKVAAVTGPASIRLM

Transcript Sequence

Transcript ID	Os03t0372700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:14670795:14674931:1 gene:Os03g0372700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to low temperature viability protein. (Os03t0372700-01);Low temperature viability protein family protein. (Os03t0372700-02)
Sequence	GTCTTGTCGCCTCAAAATTTCCTCTCTCCTCGCCACCGTCTCTTCTGTTTACGAGCTCCT CTCCAAATCCCCAAAACCCTAATCCAGCCAGCCGCCGCCGCCGCCGCCGCCATGGGAGGA GGAGGAGGAGGAGGGCGCAAGCCACGCAACTTCGCCACGTTCCGGCTGTTCCCGCGCGCC GGCGCCGCCGACCCCAACGACCGCGTCTTCGTCCGCGTCGACAGCAACGACTACACCGTC CCCGGCTTCGGCGACGACGACGCCTTCGACTCCTCATCCCTCTCCCTCACCGGTGACGCC GCCGCCGGCGATCACTTCTCCTCCGCCTCCGGCCCCCTCCCCGACCACGTCCGCCGCGAG ATCCTCGAGCTCGGCCTCCCGGACGACGGCTACAATTACCTCCACCACCTCCGCGAGCTC CGCCCCTCCGCCGCCGCCGCCGCCTCATCCTTCGCGCCCAACCAGACTGCCCCGCCTCTC CCCCTCGACGTGAAGGCGTATGATGCCAGTAGGGTGCGGATTGCTTCTGGCAATGTTGAG GATGAGATGGACGAGGGGAGGACGATGTGTAAGGTGGCCGCGAAGACAGCGCCTGTGAGG CGGATTGAGAGGGCGGTTGATCCTGACATCGCGAGGTTGCTCGACGAGACCGATGTCTCC CATGGCGGGTCGGAGGATGAGGGACTGGAGGAGGATTTTGTCATCATGGCAAACCGGGCT GAGGGGGATGAGGAGGAAGATGATGATGATGAAGAGGAGGAAGTGATGGATGGTGTGTTC TTAAGTGATGTTGAAGAGGAAGAGGAGTTTGAGGATGATGAGGGTGAGCCCAAGCCGAGG GTCCGGCGGTTGCTGGATGAACAGTTTGATTTGCTTGCTTTGGAAGAATATGGTGACAGT GATGATGATGATGATGATCCAGGTGTTAGAAATGGGGAATGTGAACTGCCTACTGAGGTT ATTGATGAACTGAAACTGTTCCATAGTCAAAATGTATCTGTCACAGAAGAATATAGAACG CCGGCAGATTTTGTTCGTAGAAAATTGGATTCAAGCACAGCAGAGGAGGTGGATGAATCT GCTAATGTAATCCAAAAATGTGCTGAATATGCTGAAAGGTATTTAAATGAAACTGCTGAA GAGGAAGAAGTTGTACTTGTTTCAGAAAGCAGTGATGAGTCTGAAGTTTGGGACTGTGAG ACTATTGTTTCCACATACTCAAATCTTGACAACCATCCTGGAAAGATTCAAACACCAGGA AATCCTAAAAATAGGCTCCCTAAAGTTTTTCCTGGAGAAACAGCTACAACGAAAGATATC ATCAGGCTTCAAGGCAAAGAGAGACTTCCAGTAGAATACCTACCACAGAGGAAAAGAAAT GGTGAGAAGGAGAAGAAAGCAAAGCCAACAGAAACTCCAAGTGCTGAAAGTTTTAAGAAA GGAGCTCAAAAGGAAACAAAGGAGGAAAAGAAAGCAAGAAAGGCTGCAGTGAAAGAAGAG AAGAGAGAAGCACGGAAAGCAAAGAAAGAGCTGAAAGGCCTGTACAAATTTGAAACACAG AAGGCTCAGAAGGTTGCTGCTGTTACAGGGCCAGCTTCTATACGGCTAATGTAATAACCA TGTTGATTTGTAAACATGTTCTGCACGATAACGACGCAATGTGAGTCGTAAGGAGATCCT CATCCTACAAGGTACGACGGCAAGATATGATACACTGATACCTCCTGGGTCATCTTGTGC CATGTTTGTGGTTTTTGTCGACTAGATACCCAGTGTATACCATGTTTGGACTTCTGTATG AGAAATATGTCGTGTAAGACGTAGGTTATCTAATGGACACAGTGGCGCTATTTTGAATGT GATTTTACACTG