Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0370500-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:14545715:14547899:1 gene:Os03g0370500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (Nucleolar protein NAP57 homolog) (Nopp-140 associated protein of 57 kDa homolog) (AtNAP57). (Os03t0370500-02)
Sequence	ATGTCCACGCCACCGCCGGCCGCCGCCGCCTCCCCGGCCACCGACCAAGGCAAGACCAAG TCGAAGAAGAAGAGCAAGAAGCATCAGGAGGACACCTCCTCCTCCCTGGCCGTCGCCGCG GCGTCGGTGGATGAGGCGGCGGAGGCCAAGGCCGACGGCTACCTGATCAAGCCGCAGTCG GTGGCGCCGCCGCTGGACACGTCGGCGTGGCCGCTCCTCCTCAAGAACTACGACCGCCTC AACGTCCGCACCGGCCACTACACCCCGCTCCCCGCCGGCCACTCCCCGCTCAAGCGGCCC ATCGCCGAGTACCTCCGCTACGGCGTCATCAACCTCGACAAGCCGTCGAACCCTTCCTCG CACGAGGTCGTCGCCTGGATCAAGCGCCTCCTCCGCGTCGAGAAGACCGGCCACAGCGGC ACCCTTGACCCCAAGGTCACCGGCAACCTCATCGTCTGCGTCGACCGCGCCACCCGCCTC GTCAAGTCCCAGCAGGGCGCCGGCAAGGAGTACGTCTGCGTCGCGCGCTTCCACGCCGCC GTGCCCGACACCGCCCGCGTCGCGCGCGCGCTCGAGGCGCTCACGGGCGCCGTCTTCCAG CGGCCCCCGCTCATCTCCGCCGTCAAGCGGCAGCTCCGGGTCCGCACCATCTACGAGAGC AAGCTCCTCGAGCACGACGCCGACCGCCACCTCGCCGTGTTCTGGATCTCCTGCGAGGCC GGCACCTACGTGCGGACGCTCTGCGTTCACCTCGGCCTGCTGCTCGGCGTCGGCGCGCAT ATGCAGGAGCTCCGCCGTGTCCGGTCGGGGATCCTCGGCGAGACCGACAACATGGTGACG ATGCACGATGTCATGGACGCGAGGTGGGCGATGGACAACTTCAACGATGAGTCCTACCTG CGGCGCATCGTCATGCCGCTGGAGGTCCTGCTCACTAGCTACAAGAGGCTTGTTGTGAAG GATTCTGCTGTGAATGCTATATGCTATGGTGCGAAGCTCATGATCCCTGGGTTGCTTCGA TTCGAGAATGAGATTGAAGTAGGGGAGGAGGTGGTTCTCATGACAACCAAGGGGGAAGCG ATTGCGATCGGCATTGCGGAGATGACCACGGCTGTTATGGCGACTTGTGACCATGGAGCG GTTGCCAAGATTAAGAGGGTGGTGATGGATAGGGACACATACCCGAGGAAGTGGGGGCTT GGGCCTGTGGCGCTTAAGAAGAAAAAGATGGTTGCTGAAGGGCTTCTTGACAAGCATGGG AAGCCAAATGAAAAGACACCAAGTGAGTGGCTTCGCAATGCCGTGCTTCCAGCTGGTGGT GATGCAATGATTGCCGGCATTGCTGCAGCACCTGAGCCAGAGAAGCCAAAGGTGAAAGAG GAGGCAGATGTGGCTGAAGAGACCAAGGAGAAGAAAAAGAAGAAGCATAAGGACTGGGCA GGTGACAATGCTGATGAGGGGAGGAAGAGGAAGGTTGGAGATGATGATCTCTCTGCTTCT GTGAGTGCGAAGAAGATTAAGGTTGAGGAAGAGGCTGATGCAGTGGAAGGGGAAAAGAGT GAGAAGAAGAAGAAGAAAAAGAAGGACAAGGCTGAATCGGCATATGCCGATGGAGAGGTG AAGGCTGAGTTGTCTGATGGGGAGAAGGGTGGCAGTGAGAAGAAGAAAAAGAAGAAGAAG AGCAAGGAAGGAGAAGCTGGGGATGATGAAGCTGAGAAAAGTGAGAAGAAAAAGGAGAAG AAAAAGAAGAATCGGGATGCAGAGGTGACACAATAG

Peptide Sequence

PEP ID	Os03t0370500-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:14545715:14547899:1 gene:Os03g0370500 transcript:Os03t0370500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (Nucleolar protein NAP57 homolog) (Nopp-140 associated protein of 57 kDa homolog) (AtNAP57). (Os03t0370500-02)
Sequence	MSTPPPAAAASPATDQGKTKSKKKSKKHQEDTSSSLAVAAASVDEAAEAKADGYLIKPQS VAPPLDTSAWPLLLKNYDRLNVRTGHYTPLPAGHSPLKRPIAEYLRYGVINLDKPSNPSS HEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYVCVARFHAA VPDTARVARALEALTGAVFQRPPLISAVKRQLRVRTIYESKLLEHDADRHLAVFWISCEA GTYVRTLCVHLGLLLGVGAHMQELRRVRSGILGETDNMVTMHDVMDARWAMDNFNDESYL RRIVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENEIEVGEEVVLMTTKGEA IAIGIAEMTTAVMATCDHGAVAKIKRVVMDRDTYPRKWGLGPVALKKKKMVAEGLLDKHG KPNEKTPSEWLRNAVLPAGGDAMIAGIAAAPEPEKPKVKEEADVAEETKEKKKKKHKDWA GDNADEGRKRKVGDDDLSASVSAKKIKVEEEADAVEGEKSEKKKKKKKDKAESAYADGEV KAELSDGEKGGSEKKKKKKKSKEGEAGDDEAEKSEKKKEKKKKNRDAEVTQ

Transcript Sequence

Transcript ID	Os03t0370500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:14545715:14547899:1 gene:Os03g0370500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (Nucleolar protein NAP57 homolog) (Nopp-140 associated protein of 57 kDa homolog) (AtNAP57). (Os03t0370500-02)
Sequence	CTTTCTCCTCCCCCTCCCGCCGCCGCCATTCGCCTCCCGCGAAAACCCTAGCCGCCGCCG CCGCCGCCGCTGCCCAAAATGTCCACGCCACCGCCGGCCGCCGCCGCCTCCCCGGCCACC GACCAAGGCAAGACCAAGTCGAAGAAGAAGAGCAAGAAGCATCAGGAGGACACCTCCTCC TCCCTGGCCGTCGCCGCGGCGTCGGTGGATGAGGCGGCGGAGGCCAAGGCCGACGGCTAC CTGATCAAGCCGCAGTCGGTGGCGCCGCCGCTGGACACGTCGGCGTGGCCGCTCCTCCTC AAGAACTACGACCGCCTCAACGTCCGCACCGGCCACTACACCCCGCTCCCCGCCGGCCAC TCCCCGCTCAAGCGGCCCATCGCCGAGTACCTCCGCTACGGCGTCATCAACCTCGACAAG CCGTCGAACCCTTCCTCGCACGAGGTCGTCGCCTGGATCAAGCGCCTCCTCCGCGTCGAG AAGACCGGCCACAGCGGCACCCTTGACCCCAAGGTCACCGGCAACCTCATCGTCTGCGTC GACCGCGCCACCCGCCTCGTCAAGTCCCAGCAGGGCGCCGGCAAGGAGTACGTCTGCGTC GCGCGCTTCCACGCCGCCGTGCCCGACACCGCCCGCGTCGCGCGCGCGCTCGAGGCGCTC ACGGGCGCCGTCTTCCAGCGGCCCCCGCTCATCTCCGCCGTCAAGCGGCAGCTCCGGGTC CGCACCATCTACGAGAGCAAGCTCCTCGAGCACGACGCCGACCGCCACCTCGCCGTGTTC TGGATCTCCTGCGAGGCCGGCACCTACGTGCGGACGCTCTGCGTTCACCTCGGCCTGCTG CTCGGCGTCGGCGCGCATATGCAGGAGCTCCGCCGTGTCCGGTCGGGGATCCTCGGCGAG ACCGACAACATGGTGACGATGCACGATGTCATGGACGCGAGGTGGGCGATGGACAACTTC AACGATGAGTCCTACCTGCGGCGCATCGTCATGCCGCTGGAGGTCCTGCTCACTAGCTAC AAGAGGCTTGTTGTGAAGGATTCTGCTGTGAATGCTATATGCTATGGTGCGAAGCTCATG ATCCCTGGGTTGCTTCGATTCGAGAATGAGATTGAAGTAGGGGAGGAGGTGGTTCTCATG ACAACCAAGGGGGAAGCGATTGCGATCGGCATTGCGGAGATGACCACGGCTGTTATGGCG ACTTGTGACCATGGAGCGGTTGCCAAGATTAAGAGGGTGGTGATGGATAGGGACACATAC CCGAGGAAGTGGGGGCTTGGGCCTGTGGCGCTTAAGAAGAAAAAGATGGTTGCTGAAGGG CTTCTTGACAAGCATGGGAAGCCAAATGAAAAGACACCAAGTGAGTGGCTTCGCAATGCC GTGCTTCCAGCTGGTGGTGATGCAATGATTGCCGGCATTGCTGCAGCACCTGAGCCAGAG AAGCCAAAGGTGAAAGAGGAGGCAGATGTGGCTGAAGAGACCAAGGAGAAGAAAAAGAAG AAGCATAAGGACTGGGCAGGTGACAATGCTGATGAGGGGAGGAAGAGGAAGGTTGGAGAT GATGATCTCTCTGCTTCTGTGAGTGCGAAGAAGATTAAGGTTGAGGAAGAGGCTGATGCA GTGGAAGGGGAAAAGAGTGAGAAGAAGAAGAAGAAAAAGAAGGACAAGGCTGAATCGGCA TATGCCGATGGAGAGGTGAAGGCTGAGTTGTCTGATGGGGAGAAGGGTGGCAGTGAGAAG AAGAAAAAGAAGAAGAAGAGCAAGGAAGGAGAAGCTGGGGATGATGAAGCTGAGAAAAGT GAGAAGAAAAAGGAGAAGAAAAAGAAGAATCGGGATGCAGAGGTGACACAATAGTTGGAG AGTGTAATTTTAGCCAGATCGTTGACATTGTAGGTTGCAGATTGGAGGTGTCTACACTGA CCTCTGGCTTGTTGTTCACTTGCAAACAATAATCATTCTAGAGGCCTAGTTTAGCATTTT TATATCACTATCCGTTTACTGCTTTGGACATGAAATGCAAATTAACTAGGCCAGCCTTTT TATATTGCCCCACTCATGATGGCCTATTTGTGTTGCTGTTCCAGTTATCACTTAGATGTG ATGAATTTTGCTCCATTGAAGTTATTGGTCTTTTGATTTGGTACATGCTGCTGCCTCATT TATGAAATTACTTGCCTTGGTGATG