Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0370000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:14526314:14530466:1 gene:Os03g0370000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyruvate dehydrogenase kinase 1 description:Similar to Pyruvate dehydrogenase kinase isoform 1 (EC 2.7.1.99). (Os03t0370000-01)
Sequence

ATGATGGCGTACTCGGAGCCGGCGGCGAGGGCGGTGGCGGAGGAGGTGGCGCGGTGGGGA
GGGATGAGGCAGACGGGGGTGACGCTGCGGTACATGATGGAGTTCGGGGCGCGCCCCACG
GAGAGGAACCTGCTGCGGTCGGCGCAGTTCCTGCGCAGGGAGCTCCCCATCCGCATCGCC
CGCCGCGCGCTCGACCTCGACTCCCTCCCCTTCGGCCTCTCCACCAAGCCCGCCATCCTC
AAGGTGAGAGATTGGTATTTGGACTCATTCCGCGACTTACGGTGCTTCCCGGAGGTGAGG
AACCGGGATGATGAGCTTGCATTCACCGAGATGATCAAGATGATTCGAGTGCGGCACAAC
AATGTGGTGCCCACCATGGCGTTGGGTGTGCGGCAGCTGAAGAAAGACCTGGGTGGCACA
AAGGCCTTTCCCCCTGGCATTGATGAGATCCATCAGTTCCTCGACCGCTTCTACATGTCA
AGGATTGGGATCCGCATGCTGATAGGGCAGCATGTTGCTTTGCATGAGCCTGATCCAGAA
CCTGGTGTTATTGGACTCATAAGCAAAAGATTATCCCCCATGCTGGTGGCTCAACATGCT
ACTGAAGATGCACGTGCTATTTGCATGAGGGAATATGGATCAGCCCCTGATGTGAACATA
TATGGAGACCCAGATTTCACATTTCCATATGTTAAACTACATCTACAACTGATGATGTTT
GAATTGGTGAAGAATTCCCTCCGTGCAGTACAGGAACGATATATGAACTCTGATAAGCAT
GCGCCTCCTGTTAGAATCATAGTCGCTGATGGAGCAGAGGACGTAACAATCAAGATTAGT
GATGAAGGTGGTGGAATACCCAGAAGTGGTCTCTCGAGAATTTTCACATATCTCTACAGC
ACAGCAGAAAACCCACCTGATCTGGATGGCCGTAACGAAGGAGTGACCATGGCCGGGTAC
GGCTATGGGATCCCGATTAGCCGTCTTTATGCTCGATATTTTGGCGGGGACCTGCAGATC
ATTTCTATGGAAGGATATGGAACCGATGCTTACCTCCACCTATCACGGCTAGGAGATTCG
GAGGAGCCCTTGCATTAG

Peptide Sequence

PEP ID

Os03t0370000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:14526314:14530466:1 gene:Os03g0370000 transcript:Os03t0370000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyruvate dehydrogenase kinase 1 description:Similar to Pyruvate dehydrogenase kinase isoform 1 (EC 2.7.1.99). (Os03t0370000-01)
Sequence

MMAYSEPAARAVAEEVARWGGMRQTGVTLRYMMEFGARPTERNLLRSAQFLRRELPIRIA
RRALDLDSLPFGLSTKPAILKVRDWYLDSFRDLRCFPEVRNRDDELAFTEMIKMIRVRHN
NVVPTMALGVRQLKKDLGGTKAFPPGIDEIHQFLDRFYMSRIGIRMLIGQHVALHEPDPE
PGVIGLISKRLSPMLVAQHATEDARAICMREYGSAPDVNIYGDPDFTFPYVKLHLQLMMF
ELVKNSLRAVQERYMNSDKHAPPVRIIVADGAEDVTIKISDEGGGIPRSGLSRIFTYLYS
TAENPPDLDGRNEGVTMAGYGYGIPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLGDS
EEPLH

Transcript Sequence

Transcript ID

Os03t0370000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:14526314:14530466:1 gene:Os03g0370000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyruvate dehydrogenase kinase 1 description:Similar to Pyruvate dehydrogenase kinase isoform 1 (EC 2.7.1.99). (Os03t0370000-01)
Sequence

GCTTCTTCCACGCGCTCACGCGGCTCCCGTTTTCGCGGCTGCGTTTTCTCGCTTTCGCCG
CAGCTCCTCCCTTCGTCGTCCGTACGACGCCGGCCGGCCGATGCGCCGCCGGTCCAGGGG
CGCCGCGGGGTGGTGCTGTTGTCGGTAGGGAGGGAGTGGGGGTGGGTGGGGGGATGATGG
CGTACTCGGAGCCGGCGGCGAGGGCGGTGGCGGAGGAGGTGGCGCGGTGGGGAGGGATGA
GGCAGACGGGGGTGACGCTGCGGTACATGATGGAGTTCGGGGCGCGCCCCACGGAGAGGA
ACCTGCTGCGGTCGGCGCAGTTCCTGCGCAGGGAGCTCCCCATCCGCATCGCCCGCCGCG
CGCTCGACCTCGACTCCCTCCCCTTCGGCCTCTCCACCAAGCCCGCCATCCTCAAGGTGA
GAGATTGGTATTTGGACTCATTCCGCGACTTACGGTGCTTCCCGGAGGTGAGGAACCGGG
ATGATGAGCTTGCATTCACCGAGATGATCAAGATGATTCGAGTGCGGCACAACAATGTGG
TGCCCACCATGGCGTTGGGTGTGCGGCAGCTGAAGAAAGACCTGGGTGGCACAAAGGCCT
TTCCCCCTGGCATTGATGAGATCCATCAGTTCCTCGACCGCTTCTACATGTCAAGGATTG
GGATCCGCATGCTGATAGGGCAGCATGTTGCTTTGCATGAGCCTGATCCAGAACCTGGTG
TTATTGGACTCATAAGCAAAAGATTATCCCCCATGCTGGTGGCTCAACATGCTACTGAAG
ATGCACGTGCTATTTGCATGAGGGAATATGGATCAGCCCCTGATGTGAACATATATGGAG
ACCCAGATTTCACATTTCCATATGTTAAACTACATCTACAACTGATGATGTTTGAATTGG
TGAAGAATTCCCTCCGTGCAGTACAGGAACGATATATGAACTCTGATAAGCATGCGCCTC
CTGTTAGAATCATAGTCGCTGATGGAGCAGAGGACGTAACAATCAAGATTAGTGATGAAG
GTGGTGGAATACCCAGAAGTGGTCTCTCGAGAATTTTCACATATCTCTACAGCACAGCAG
AAAACCCACCTGATCTGGATGGCCGTAACGAAGGAGTGACCATGGCCGGGTACGGCTATG
GGATCCCGATTAGCCGTCTTTATGCTCGATATTTTGGCGGGGACCTGCAGATCATTTCTA
TGGAAGGATATGGAACCGATGCTTACCTCCACCTATCACGGCTAGGAGATTCGGAGGAGC
CCTTGCATTAGGAGATCTGGAGGAGGAAACCCTTTGCCTCAGTTCTGATACCACTGCTGT
AATTAGGATGCTATTGCTTTTACCATTGCTGTGCTGGTATGCAAATACATAGTTCCCAAG
GCCAGCCAGCTCTATGTGCTTCCAGTTTGCTGGAGCGTGATCATAATTCAGATTTCAGAA
TCCCCTCTGGTTCACATTGCCATTAGAACTCGTTATCCCTCGCCCTCGGTGGCTGCCTGA
AAAATGTGATGTACAGTTGTCCGTTTTCGGAGTTC