Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0369800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:14514243:14518369:-1 gene:Os03g0369800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NOVEL PLANT SNARE 12 description:Similar to Novel plant SNARE 13 (AtNPSN13). (Os03t0369800-01)
Sequence

ATGGCGAGCGACGTGCCCATGAGCCCGGAGCTCGAGCAGATCGACGGCGAGGTCCAGGAC
ATCTTCCGCGCCCTCCAAAATGGATTTCAAAAGATGGACAAGATTAAAGATTCAAGTAGG
CAAGCTAAACAGCTGGAGGATCTCACAGCAAAAATGAAGGAGTGCAAGCGTTTGATCAAA
GAGTTTGATCGTATATTGAAAGATGAGGAGTCAAACAACCCTCCTGAGGTCCACAAGCAG
CTAAATGACAGAAAGCAATATATGATCAAAGAGTTGAATTCCTATGTCACCTTGAGGAAG
ACATATCAAAGTAGCCTAGGTAATAATAATAAGAGGGTTGAGCTCTTTGATATGGGCGCT
GGAAGTAGTGAACCTGCTGCCGAGGACAACATCCAAATAGCATCAGCTATGACAAACCAA
CAACTGATGGATGCTGGAAGAGAACAAATGACTCAGACTGATCAAGCTATTGACCGTTCA
AAAATGGTTGTGGCACAAACTATTGAAACTGGAACACAAACTGCTTCAGCGCTATCACAG
CAAACAGAACAAATGAAGAGAATTGGCAATGAGCTGGATACTGTTCACTTTTCGTTAAAG
AAGGCTAGCCAGCTGGTGAAAGAGATTGGCCGTCAGGTTGCAACTGACAAATGCATTATG
GCATTGCTTTTTCTGATTGTTTGTGGTGTGATTGCAATTATTGTTGTTAAGATTGTCAAC
CCACATAACAAGAACATCCGCGACATCCCAGGACTTGCTCCGCCTGCTCAAAATTTCCAG
ATTAGTAACAGGAGACTGCTGTCGGTAGAAATTATCAGAGGTCTATGA

Peptide Sequence

PEP ID

Os03t0369800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:14514243:14518369:-1 gene:Os03g0369800 transcript:Os03t0369800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NOVEL PLANT SNARE 12 description:Similar to Novel plant SNARE 13 (AtNPSN13). (Os03t0369800-01)
Sequence

MASDVPMSPELEQIDGEVQDIFRALQNGFQKMDKIKDSSRQAKQLEDLTAKMKECKRLIK
EFDRILKDEESNNPPEVHKQLNDRKQYMIKELNSYVTLRKTYQSSLGNNNKRVELFDMGA
GSSEPAAEDNIQIASAMTNQQLMDAGREQMTQTDQAIDRSKMVVAQTIETGTQTASALSQ
QTEQMKRIGNELDTVHFSLKKASQLVKEIGRQVATDKCIMALLFLIVCGVIAIIVVKIVN
PHNKNIRDIPGLAPPAQNFQISNRRLLSVEIIRGL

Transcript Sequence

Transcript ID

Os03t0369800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:14514243:14518369:-1 gene:Os03g0369800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NOVEL PLANT SNARE 12 description:Similar to Novel plant SNARE 13 (AtNPSN13). (Os03t0369800-01)
Sequence

GGAGCCAAGCCCTAGGCTCCTCCTCTCCTCCCAATCCCCAATCCCTGTTCGGCTTCTCCT
TCCTCCCCTCCGCGGCCGATCGCGATGGAACCCTGAGCTACGTGGTTGGTGCTTCACCGC
TGGAGTAGAGTTCTACTATAGTAGGGTTTGGGGGCGGCGGTCTCGGAGGAGGGAGGAAGC
CTTTGGCCATGGCGAGCGACGTGCCCATGAGCCCGGAGCTCGAGCAGATCGACGGCGAGG
TCCAGGACATCTTCCGCGCCCTCCAAAATGGATTTCAAAAGATGGACAAGATTAAAGATT
CAAGTAGGCAAGCTAAACAGCTGGAGGATCTCACAGCAAAAATGAAGGAGTGCAAGCGTT
TGATCAAAGAGTTTGATCGTATATTGAAAGATGAGGAGTCAAACAACCCTCCTGAGGTCC
ACAAGCAGCTAAATGACAGAAAGCAATATATGATCAAAGAGTTGAATTCCTATGTCACCT
TGAGGAAGACATATCAAAGTAGCCTAGGTAATAATAATAAGAGGGTTGAGCTCTTTGATA
TGGGCGCTGGAAGTAGTGAACCTGCTGCCGAGGACAACATCCAAATAGCATCAGCTATGA
CAAACCAACAACTGATGGATGCTGGAAGAGAACAAATGACTCAGACTGATCAAGCTATTG
ACCGTTCAAAAATGGTTGTGGCACAAACTATTGAAACTGGAACACAAACTGCTTCAGCGC
TATCACAGCAAACAGAACAAATGAAGAGAATTGGCAATGAGCTGGATACTGTTCACTTTT
CGTTAAAGAAGGCTAGCCAGCTGGTGAAAGAGATTGGCCGTCAGGTTGCAACTGACAAAT
GCATTATGGCATTGCTTTTTCTGATTGTTTGTGGTGTGATTGCAATTATTGTTGTTAAGA
TTGTCAACCCACATAACAAGAACATCCGCGACATCCCAGGACTTGCTCCGCCTGCTCAAA
ATTTCCAGATTAGTAACAGGAGACTGCTGTCGGTAGAAATTATCAGAGGTCTATGATGAC
TGTGCTTGCAAGTTCCATGCAGGCGGAGTTCAGTTCGTTTCTTCAGAGTAGCTTAATTGC
GGTCATAAGATACTACGACATGCTGTAAAATTCTTAGTGCCTGTATATTTTATTCCCTGG
TGTATTAGATATGAAGTCAGTAGATTCCCGCGTCTGATGCTTGTATACTCCCCGGCCTTT
TGGTTGTGTGCATAAATGCATTATAGAGATGAGATCTTTTACCAGTC